RNA–Protein interactions for RNA: ENST00000553531.1

PTPN21-203, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-203ENST00000553531 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.58
PTPN21-203ENST00000553531 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.58
PTPN21-203ENST00000553531 KIF3BO15066 747 aa18.64■□□□□ 0.57
PTPN21-203ENST00000553531 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
PTPN21-203ENST00000553531 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
PTPN21-203ENST00000553531 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
PTPN21-203ENST00000553531 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
PTPN21-203ENST00000553531 ESF1Q9H501 851 aaKnown RBP18.62■□□□□ 0.57
PTPN21-203ENST00000553531 UHRF1BP1Q6BDS2 1440 aa18.62■□□□□ 0.57
PTPN21-203ENST00000553531 ZNF142P52746 1687 aaPredicted RBP18.62■□□□□ 0.57
PTPN21-203ENST00000553531 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
PTPN21-203ENST00000553531 DEPDC5O75140 1603 aa18.6■□□□□ 0.57
PTPN21-203ENST00000553531 ADGRL2O95490 1459 aa18.6■□□□□ 0.57
PTPN21-203ENST00000553531 KIF15Q9NS87 1388 aa18.6■□□□□ 0.57
PTPN21-203ENST00000553531 ABCC3O15438 1527 aa18.59■□□□□ 0.57
PTPN21-203ENST00000553531 CEP152O94986 1710 aa18.59■□□□□ 0.57
PTPN21-203ENST00000553531 PRDM15P57071 1507 aaPredicted RBP18.59■□□□□ 0.57
PTPN21-203ENST00000553531 ERBINQ96RT1 1412 aa18.58■□□□□ 0.57
PTPN21-203ENST00000553531 PZPP20742 1482 aa18.58■□□□□ 0.56
PTPN21-203ENST00000553531 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
PTPN21-203ENST00000553531 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
PTPN21-203ENST00000553531 CAMSAP1Q5T5Y3 1602 aa18.55■□□□□ 0.56
PTPN21-203ENST00000553531 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
PTPN21-203ENST00000553531 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
PTPN21-203ENST00000553531 CHIC2Q9UKJ5 165 aa18.53■□□□□ 0.56
PTPN21-203ENST00000553531 ANKRD30AQ9BXX3 1397 aa18.53■□□□□ 0.56
PTPN21-203ENST00000553531 VWDEQ8N2E2 1590 aa18.52■□□□□ 0.56
PTPN21-203ENST00000553531 FAM50AQ14320 339 aaKnown RBP18.52■□□□□ 0.56
PTPN21-203ENST00000553531 WASHC2CQ9Y4E1 1318 aa18.51■□□□□ 0.55
PTPN21-203ENST00000553531 FBXO31Q5XUX0 539 aaPredicted RBP18.51■□□□□ 0.55
PTPN21-203ENST00000553531 SPATA31D1Q6ZQQ2 1576 aa18.51■□□□□ 0.55
PTPN21-203ENST00000553531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.48■□□□□ 0.55
PTPN21-203ENST00000553531 A2ML1A8K2U0 1454 aa18.47■□□□□ 0.55
PTPN21-203ENST00000553531 CFAP65Q6ZU64 1925 aaKnown RBP18.47■□□□□ 0.55
PTPN21-203ENST00000553531 ERVK-7P63135 1459 aa18.46■□□□□ 0.55
PTPN21-203ENST00000553531 TNRQ92752 1358 aa18.46■□□□□ 0.55
PTPN21-203ENST00000553531 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
PTPN21-203ENST00000553531 RRBP1Q9P2E9 1410 aaKnown RBP18.46■□□□□ 0.55
PTPN21-203ENST00000553531 PLA2R1Q13018 1463 aa18.45■□□□□ 0.54
PTPN21-203ENST00000553531 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
PTPN21-203ENST00000553531 ROCK1Q13464 1354 aa18.43■□□□□ 0.54
PTPN21-203ENST00000553531 UNC13BO14795 1591 aa18.43■□□□□ 0.54
PTPN21-203ENST00000553531 ANKRD50Q9ULJ7 1429 aa18.43■□□□□ 0.54
PTPN21-203ENST00000553531 PTPRTO14522 1441 aa18.42■□□□□ 0.54
PTPN21-203ENST00000553531 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
PTPN21-203ENST00000553531 POLR1AO95602 1720 aaPredicted RBP18.4■□□□□ 0.54
PTPN21-203ENST00000553531 EFCAB6Q5THR3 1501 aa18.4■□□□□ 0.54
PTPN21-203ENST00000553531 NEURL4Q96JN8 1562 aa18.4■□□□□ 0.54
PTPN21-203ENST00000553531 UBR1Q8IWV7 1749 aa18.38■□□□□ 0.53
PTPN21-203ENST00000553531 UGGT1Q9NYU2 1555 aa18.38■□□□□ 0.53
PTPN21-203ENST00000553531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPN21-203ENST00000553531 SYNMO15061 1565 aa18.37■□□□□ 0.53
PTPN21-203ENST00000553531 TET3O43151 1660 aa18.37■□□□□ 0.53
PTPN21-203ENST00000553531 NCKAP5LQ9HCH0 1330 aa18.36■□□□□ 0.53
PTPN21-203ENST00000553531 GCC2Q8IWJ2 1684 aa18.35■□□□□ 0.53
PTPN21-203ENST00000553531 LTBP4Q8N2S1 1624 aa18.35■□□□□ 0.53
PTPN21-203ENST00000553531 KANK1Q14678 1352 aa18.35■□□□□ 0.53
PTPN21-203ENST00000553531 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
PTPN21-203ENST00000553531 PIK3C2BO00750 1634 aa18.34■□□□□ 0.53
PTPN21-203ENST00000553531 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
PTPN21-203ENST00000553531 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
PTPN21-203ENST00000553531 NOS1P29475 1434 aa18.33■□□□□ 0.53
PTPN21-203ENST00000553531 ITGAEP38570 1179 aa18.33■□□□□ 0.52
PTPN21-203ENST00000553531 E9PCH4 1651 aa18.32■□□□□ 0.52
PTPN21-203ENST00000553531 PKD2Q13563 968 aa18.31■□□□□ 0.52
PTPN21-203ENST00000553531 KDM5AP29375 1690 aaKnown RBP18.31■□□□□ 0.52
PTPN21-203ENST00000553531 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
PTPN21-203ENST00000553531 MED14O60244 1454 aa18.28■□□□□ 0.52
PTPN21-203ENST00000553531 ARHGAP23Q9P227 1491 aa18.28■□□□□ 0.52
PTPN21-203ENST00000553531 NAIPQ13075 1403 aa18.27■□□□□ 0.52
PTPN21-203ENST00000553531 SLIT1O75093 1534 aa18.27■□□□□ 0.51
PTPN21-203ENST00000553531 THEMISQ8N1K5 641 aaPredicted RBP18.26■□□□□ 0.51
PTPN21-203ENST00000553531 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
PTPN21-203ENST00000553531 IQGAP1P46940 1657 aa18.25■□□□□ 0.51
PTPN21-203ENST00000553531 MYO5BQ9ULV0 1848 aa18.25■□□□□ 0.51
PTPN21-203ENST00000553531 FBXO41Q8TF61 875 aa18.24■□□□□ 0.51
PTPN21-203ENST00000553531 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
PTPN21-203ENST00000553531 ADGRB3O60242 1522 aa18.23■□□□□ 0.51
PTPN21-203ENST00000553531 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
PTPN21-203ENST00000553531 IDI1Q13907 227 aa18.22■□□□□ 0.51
PTPN21-203ENST00000553531 NPHP4O75161 1426 aaPredicted RBP18.22■□□□□ 0.51
PTPN21-203ENST00000553531 NUP155O75694 1391 aa18.21■□□□□ 0.51
PTPN21-203ENST00000553531 STRCP1A6NGW2 1772 aa18.21■□□□□ 0.51
PTPN21-203ENST00000553531 TMEM131LA2VDJ0 1609 aa18.2■□□□□ 0.5
PTPN21-203ENST00000553531 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
PTPN21-203ENST00000553531 SCAF11Q99590 1463 aaKnown RBP18.2■□□□□ 0.5
PTPN21-203ENST00000553531 LTKP29376 864 aa18.18■□□□□ 0.5
PTPN21-203ENST00000553531 IQSEC2Q5JU85 1478 aa18.18■□□□□ 0.5
PTPN21-203ENST00000553531 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
PTPN21-203ENST00000553531 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
PTPN21-203ENST00000553531 SLC52A1Q9NWF4 448 aa18.14■□□□□ 0.49
PTPN21-203ENST00000553531 ZFYVE9O95405 1425 aa18.14■□□□□ 0.49
PTPN21-203ENST00000553531 CPS1P31327 1500 aa18.12■□□□□ 0.49
PTPN21-203ENST00000553531 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
PTPN21-203ENST00000553531 CLTCL1P53675 1640 aa18.09■□□□□ 0.49
PTPN21-203ENST00000553531 TRPM2O94759 1503 aa18.08■□□□□ 0.49
PTPN21-203ENST00000553531 XIRP1Q702N8 1843 aaKnown RBP18.08■□□□□ 0.48
PTPN21-203ENST00000553531 STAG3Q9UJ98 1225 aa18.07■□□□□ 0.48
PTPN21-203ENST00000553531 ALKQ9UM73 1620 aa18.06■□□□□ 0.48
PTPN21-203ENST00000553531 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms