RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 VWDEQ8N2E2 1590 aa22.45■■□□□ 1.18
MTHFD1-204ENST00000553405 MADDQ8WXG6 1647 aa22.45■■□□□ 1.18
MTHFD1-204ENST00000553405 UNC13BO14795 1591 aa22.44■■□□□ 1.18
MTHFD1-204ENST00000553405 KDM5DQ9BY66 1539 aa22.42■■□□□ 1.18
MTHFD1-204ENST00000553405 TRIM26Q12899 539 aaPredicted RBP22.42■■□□□ 1.18
MTHFD1-204ENST00000553405 FAM135AQ9P2D6 1515 aa22.41■■□□□ 1.18
MTHFD1-204ENST00000553405 MLECQ14165 292 aa22.41■■□□□ 1.18
MTHFD1-204ENST00000553405 FER1L4A9Z1Z3 1794 aa22.4■■□□□ 1.18
MTHFD1-204ENST00000553405 ABCC3O15438 1527 aa22.38■■□□□ 1.17
MTHFD1-204ENST00000553405 GGT6Q6P531 493 aa22.38■■□□□ 1.17
MTHFD1-204ENST00000553405 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
MTHFD1-204ENST00000553405 SETD5Q9C0A6 1442 aa22.37■■□□□ 1.17
MTHFD1-204ENST00000553405 LMTK2Q8IWU2 1503 aa22.36■■□□□ 1.17
MTHFD1-204ENST00000553405 RIMS1Q86UR5 1692 aaKnown RBP22.36■■□□□ 1.17
MTHFD1-204ENST00000553405 MROH2AA6NES4 1674 aa22.35■■□□□ 1.17
MTHFD1-204ENST00000553405 CLTCQ00610 1675 aaKnown RBP22.35■■□□□ 1.17
MTHFD1-204ENST00000553405 ZC3H13Q5T200 1668 aaKnown RBP22.35■■□□□ 1.17
MTHFD1-204ENST00000553405 CEP152O94986 1710 aa22.34■■□□□ 1.17
MTHFD1-204ENST00000553405 CNTLNQ9NXG0 1405 aa22.33■■□□□ 1.17
MTHFD1-204ENST00000553405 IQGAP3Q86VI3 1631 aa22.33■■□□□ 1.17
MTHFD1-204ENST00000553405 PTPRMP28827 1452 aa22.32■■□□□ 1.16
MTHFD1-204ENST00000553405 RAB3GAP2Q9H2M9 1393 aa22.31■■□□□ 1.16
MTHFD1-204ENST00000553405 CAMSAP1Q5T5Y3 1602 aa22.29■■□□□ 1.16
MTHFD1-204ENST00000553405 C3P01024 1663 aa22.29■■□□□ 1.16
MTHFD1-204ENST00000553405 PZPP20742 1482 aa22.28■■□□□ 1.16
MTHFD1-204ENST00000553405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.165e-6■□□□□ 8.2
MTHFD1-204ENST00000553405 WASHC2CQ9Y4E1 1318 aa22.27■■□□□ 1.16
MTHFD1-204ENST00000553405 EFCAB6Q5THR3 1501 aa22.26■■□□□ 1.15
MTHFD1-204ENST00000553405 NUP155O75694 1391 aa22.26■■□□□ 1.15
MTHFD1-204ENST00000553405 ZMYM3Q14202 1370 aa22.26■■□□□ 1.15
MTHFD1-204ENST00000553405 ARHGAP31Q2M1Z3 1444 aa22.26■■□□□ 1.15
MTHFD1-204ENST00000553405 TET3O43151 1660 aa22.26■■□□□ 1.15
MTHFD1-204ENST00000553405 HRCP23327 699 aa22.25■■□□□ 1.15
MTHFD1-204ENST00000553405 KANK1Q14678 1352 aa22.25■■□□□ 1.15
MTHFD1-204ENST00000553405 NPATQ14207 1427 aa22.23■■□□□ 1.15
MTHFD1-204ENST00000553405 E9PCH4 1651 aa22.2■■□□□ 1.15
MTHFD1-204ENST00000553405 CEBPAP49715 358 aaPredicted RBP22.2■■□□□ 1.14
MTHFD1-204ENST00000553405 SPATA31D1Q6ZQQ2 1576 aa22.18■■□□□ 1.14
MTHFD1-204ENST00000553405 ESF1Q9H501 851 aaKnown RBP22.18■■□□□ 1.14
MTHFD1-204ENST00000553405 RPRD2Q5VT52 1461 aaKnown RBP22.17■■□□□ 1.14
MTHFD1-204ENST00000553405 PREX1Q8TCU6 1659 aa22.16■■□□□ 1.14
MTHFD1-204ENST00000553405 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
MTHFD1-204ENST00000553405 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
MTHFD1-204ENST00000553405 FBXO31Q5XUX0 539 aaPredicted RBP22.15■■□□□ 1.14
MTHFD1-204ENST00000553405 NOS1P29475 1434 aa22.14■■□□□ 1.14
MTHFD1-204ENST00000553405 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
MTHFD1-204ENST00000553405 TRIM52Q96A61 297 aa22.13■■□□□ 1.13
MTHFD1-204ENST00000553405 SYNMO15061 1565 aa22.12■■□□□ 1.13
MTHFD1-204ENST00000553405 PLA2R1Q13018 1463 aa22.1■■□□□ 1.13
MTHFD1-204ENST00000553405 PTPRTO14522 1441 aa22.1■■□□□ 1.13
MTHFD1-204ENST00000553405 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
MTHFD1-204ENST00000553405 CFAP65Q6ZU64 1925 aaKnown RBP22.08■■□□□ 1.13
MTHFD1-204ENST00000553405 SLC4A1APQ9BWU0 796 aaKnown RBP22.08■■□□□ 1.13
MTHFD1-204ENST00000553405 SETD1BQ9UPS6 1966 aaKnown RBP22.08■■□□□ 1.12
MTHFD1-204ENST00000553405 PKD2Q13563 968 aa22.07■■□□□ 1.12
MTHFD1-204ENST00000553405 TNRQ92752 1358 aa22.07■■□□□ 1.12
MTHFD1-204ENST00000553405 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
MTHFD1-204ENST00000553405 SPHKAPQ2M3C7 1700 aa22.06■■□□□ 1.12
MTHFD1-204ENST00000553405 PIK3C2BO00750 1634 aa22.06■■□□□ 1.12
MTHFD1-204ENST00000553405 PLPPR3Q6T4P5 718 aa22.05■■□□□ 1.12
MTHFD1-204ENST00000553405 TRPM2O94759 1503 aa22.04■■□□□ 1.12
MTHFD1-204ENST00000553405 ZNF142P52746 1687 aaPredicted RBP22.03■■□□□ 1.12
MTHFD1-204ENST00000553405 UGGT1Q9NYU2 1555 aa22.02■■□□□ 1.12
MTHFD1-204ENST00000553405 LMTK3Q96Q04 1460 aa22.02■■□□□ 1.12
MTHFD1-204ENST00000553405 FOXD1Q16676 465 aa22.01■■□□□ 1.11
MTHFD1-204ENST00000553405 NLRP1Q9C000 1473 aa22.01■■□□□ 1.11
MTHFD1-204ENST00000553405 DHX57Q6P158 1386 aaKnown RBP21.99■■□□□ 1.11
MTHFD1-204ENST00000553405 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
MTHFD1-204ENST00000553405 A2ML1A8K2U0 1454 aa21.98■■□□□ 1.11
MTHFD1-204ENST00000553405 CLTCL1P53675 1640 aa21.98■■□□□ 1.11
MTHFD1-204ENST00000553405 ANKRD30BQ9BXX2 1392 aa21.97■■□□□ 1.11
MTHFD1-204ENST00000553405 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
MTHFD1-204ENST00000553405 IDI1Q13907 227 aa21.96■■□□□ 1.11
MTHFD1-204ENST00000553405 KDM5AP29375 1690 aaKnown RBP21.95■■□□□ 1.1
MTHFD1-204ENST00000553405 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
MTHFD1-204ENST00000553405 SLC52A1Q9NWF4 448 aa21.94■■□□□ 1.1
MTHFD1-204ENST00000553405 TMEM131LA2VDJ0 1609 aa21.93■■□□□ 1.1
MTHFD1-204ENST00000553405 ADGRB3O60242 1522 aa21.92■■□□□ 1.1
MTHFD1-204ENST00000553405 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
MTHFD1-204ENST00000553405 MYO5BQ9ULV0 1848 aa21.87■■□□□ 1.09
MTHFD1-204ENST00000553405 ARHGAP23Q9P227 1491 aa21.86■■□□□ 1.09
MTHFD1-204ENST00000553405 SPATA31E1Q6ZUB1 1445 aa21.86■■□□□ 1.09
MTHFD1-204ENST00000553405 CCDC144AA2RUR9 1427 aa21.85■■□□□ 1.09
MTHFD1-204ENST00000553405 NEURL4Q96JN8 1562 aa21.85■■□□□ 1.09
MTHFD1-204ENST00000553405 SLIT1O75093 1534 aa21.85■■□□□ 1.09
MTHFD1-204ENST00000553405 HSPA2P54652 639 aa21.83■■□□□ 1.09
MTHFD1-204ENST00000553405 KIF1BO60333 1816 aa21.83■■□□□ 1.08
MTHFD1-204ENST00000553405 ZFYVE9O95405 1425 aa21.81■■□□□ 1.08
MTHFD1-204ENST00000553405 STRCQ7RTU9 1775 aa21.8■■□□□ 1.08
MTHFD1-204ENST00000553405 TMEM2Q9UHN6 1383 aa21.8■■□□□ 1.08
MTHFD1-204ENST00000553405 THEMISQ8N1K5 641 aaPredicted RBP21.79■■□□□ 1.08
MTHFD1-204ENST00000553405 NEXMIFQ5QGS0 1516 aa21.76■■□□□ 1.07
MTHFD1-204ENST00000553405 LTKP29376 864 aa21.74■■□□□ 1.07
MTHFD1-204ENST00000553405 IFT172Q9UG01 1749 aa21.74■■□□□ 1.07
MTHFD1-204ENST00000553405 RIMS2Q9UQ26 1411 aa21.73■■□□□ 1.07
MTHFD1-204ENST00000553405 POLR1AO95602 1720 aaPredicted RBP21.73■■□□□ 1.07
MTHFD1-204ENST00000553405 MED14O60244 1454 aa21.72■■□□□ 1.07
MTHFD1-204ENST00000553405 PPLO60437 1756 aa21.72■■□□□ 1.07
MTHFD1-204ENST00000553405 SIN3AQ96ST3 1273 aa21.72■■□□□ 1.07
MTHFD1-204ENST00000553405 SCAF11Q99590 1463 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms