RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 DIP2CQ9Y2E4 1556 aa14.88□□□□□ -0.03
MMP19-209ENST00000552872 MLH3Q9UHC1 1453 aa14.88□□□□□ -0.03
MMP19-209ENST00000552872 RTEL1-TNFRSF6BF6WH68 1400 aa14.88□□□□□ -0.03
MMP19-209ENST00000552872 DHX57Q6P158 1386 aaKnown RBP14.87□□□□□ -0.03
MMP19-209ENST00000552872 DUOX2Q9NRD8 1548 aa14.87□□□□□ -0.03
MMP19-209ENST00000552872 NUP155O75694 1391 aa14.86□□□□□ -0.03
MMP19-209ENST00000552872 A2MP01023 1474 aa14.86□□□□□ -0.03
MMP19-209ENST00000552872 ARID4BQ4LE39 1312 aaPredicted RBP14.85□□□□□ -0.03
MMP19-209ENST00000552872 DHX29Q7Z478 1369 aaKnown RBP14.84□□□□□ -0.03
MMP19-209ENST00000552872 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
MMP19-209ENST00000552872 ZMYM4Q5VZL5 1548 aa14.83□□□□□ -0.03
MMP19-209ENST00000552872 MPHOSPH9Q99550 1183 aa14.83□□□□□ -0.04
MMP19-209ENST00000552872 CFAP65Q6ZU64 1925 aaKnown RBP14.82□□□□□ -0.04
MMP19-209ENST00000552872 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
MMP19-209ENST00000552872 SIN3AQ96ST3 1273 aa14.82□□□□□ -0.04
MMP19-209ENST00000552872 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
MMP19-209ENST00000552872 ERBINQ96RT1 1412 aa14.8□□□□□ -0.04
MMP19-209ENST00000552872 SLC24A1O60721 1099 aa14.8□□□□□ -0.04
MMP19-209ENST00000552872 PZPP20742 1482 aa14.8□□□□□ -0.04
MMP19-209ENST00000552872 PKD2Q13563 968 aa14.8□□□□□ -0.04
MMP19-209ENST00000552872 ATP10AO60312 1499 aa14.79□□□□□ -0.04
MMP19-209ENST00000552872 ARHGEF40Q8TER5 1519 aa14.79□□□□□ -0.04
MMP19-209ENST00000552872 MROH1Q8NDA8 1641 aa14.77□□□□□ -0.05
MMP19-209ENST00000552872 FAM135AQ9P2D6 1515 aa14.77□□□□□ -0.05
MMP19-209ENST00000552872 CEP152O94986 1710 aa14.76□□□□□ -0.05
MMP19-209ENST00000552872 MAGI2Q86UL8 1455 aa14.76□□□□□ -0.05
MMP19-209ENST00000552872 UNC13BO14795 1591 aa14.75□□□□□ -0.05
MMP19-209ENST00000552872 WASHC2CQ9Y4E1 1318 aa14.74□□□□□ -0.05
MMP19-209ENST00000552872 DEPDC5O75140 1603 aa14.73□□□□□ -0.05
MMP19-209ENST00000552872 EIF2AK4Q9P2K8 1649 aaKnown RBP14.72□□□□□ -0.05
MMP19-209ENST00000552872 IQGAP3Q86VI3 1631 aa14.7□□□□□ -0.06
MMP19-209ENST00000552872 PRDM15P57071 1507 aaPredicted RBP14.7□□□□□ -0.06
MMP19-209ENST00000552872 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
MMP19-209ENST00000552872 E9PCH4 1651 aa14.69□□□□□ -0.06
MMP19-209ENST00000552872 KANK1Q14678 1352 aa14.69□□□□□ -0.06
MMP19-209ENST00000552872 CLTCQ00610 1675 aaKnown RBP14.68□□□□□ -0.06
MMP19-209ENST00000552872 CEBPAP49715 358 aaPredicted RBP14.68□□□□□ -0.06
MMP19-209ENST00000552872 FBXO31Q5XUX0 539 aaPredicted RBP14.68□□□□□ -0.06
MMP19-209ENST00000552872 KDM5DQ9BY66 1539 aa14.68□□□□□ -0.06
MMP19-209ENST00000552872 ABCC3O15438 1527 aa14.66□□□□□ -0.06
MMP19-209ENST00000552872 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
MMP19-209ENST00000552872 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
MMP19-209ENST00000552872 VWDEQ8N2E2 1590 aa14.65□□□□□ -0.06
MMP19-209ENST00000552872 BCORL1Q5H9F3 1711 aa14.65□□□□□ -0.06
MMP19-209ENST00000552872 ANKRD30BQ9BXX2 1392 aa14.65□□□□□ -0.06
MMP19-209ENST00000552872 REREQ9P2R6 1566 aa14.64□□□□□ -0.07
MMP19-209ENST00000552872 ESF1Q9H501 851 aaKnown RBP14.64□□□□□ -0.07
MMP19-209ENST00000552872 PLA2R1Q13018 1463 aa14.64□□□□□ -0.07
MMP19-209ENST00000552872 TET3O43151 1660 aa14.63□□□□□ -0.07
MMP19-209ENST00000552872 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
MMP19-209ENST00000552872 NPATQ14207 1427 aa14.63□□□□□ -0.07
MMP19-209ENST00000552872 RGL3Q3MIN7 710 aa14.63□□□□□ -0.07
MMP19-209ENST00000552872 AGLP35573 1532 aa14.63□□□□□ -0.07
MMP19-209ENST00000552872 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
MMP19-209ENST00000552872 CHGAP10645 457 aaKnown RBP14.6□□□□□ -0.07
MMP19-209ENST00000552872 FER1L4A9Z1Z3 1794 aa14.59□□□□□ -0.07
MMP19-209ENST00000552872 SPHKAPQ2M3C7 1700 aa14.59□□□□□ -0.07
MMP19-209ENST00000552872 MADDQ8WXG6 1647 aa14.58□□□□□ -0.08
MMP19-209ENST00000552872 ZMYM3Q14202 1370 aa14.58□□□□□ -0.08
MMP19-209ENST00000552872 ZNF326Q5BKZ1 582 aaKnown RBP14.58□□□□□ -0.08
MMP19-209ENST00000552872 KDM2AQ9Y2K7 1162 aa14.58□□□□□ -0.08
MMP19-209ENST00000552872 NUTM2DQ5VT03 806 aaPredicted RBP14.57□□□□□ -0.08
MMP19-209ENST00000552872 YTHDC1Q96MU7 727 aaKnown RBP14.56□□□□□ -0.08
MMP19-209ENST00000552872 RIMS1Q86UR5 1692 aaKnown RBP14.56□□□□□ -0.08
MMP19-209ENST00000552872 CCDC144AA2RUR9 1427 aa14.56□□□□□ -0.08
MMP19-209ENST00000552872 CLTCL1P53675 1640 aa14.56□□□□□ -0.08
MMP19-209ENST00000552872 LMTK2Q8IWU2 1503 aa14.56□□□□□ -0.08
MMP19-209ENST00000552872 L3MBTL2Q969R5 705 aa14.55□□□□□ -0.08
MMP19-209ENST00000552872 TONSLQ96HA7 1378 aa14.55□□□□□ -0.08
MMP19-209ENST00000552872 ZC3H13Q5T200 1668 aaKnown RBP14.55□□□□□ -0.08
MMP19-209ENST00000552872 PREX1Q8TCU6 1659 aa14.54□□□□□ -0.08
MMP19-209ENST00000552872 SYNMO15061 1565 aa14.54□□□□□ -0.08
MMP19-209ENST00000552872 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
MMP19-209ENST00000552872 RPRD2Q5VT52 1461 aaKnown RBP14.53□□□□□ -0.08
MMP19-209ENST00000552872 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
MMP19-209ENST00000552872 IDI1Q13907 227 aa14.53□□□□□ -0.08
MMP19-209ENST00000552872 C3P01024 1663 aa14.52□□□□□ -0.08
MMP19-209ENST00000552872 ANP32EQ9BTT0 268 aa14.52□□□□□ -0.08
MMP19-209ENST00000552872 DCAF11Q8TEB1 546 aa14.52□□□□□ -0.09
MMP19-209ENST00000552872 TRPM2O94759 1503 aa14.52□□□□□ -0.09
MMP19-209ENST00000552872 PTPRTO14522 1441 aa14.51□□□□□ -0.09
MMP19-209ENST00000552872 MYO5BQ9ULV0 1848 aa14.51□□□□□ -0.09
MMP19-209ENST00000552872 MROH2AA6NES4 1674 aa14.5□□□□□ -0.09
MMP19-209ENST00000552872 ERVK-7P63135 1459 aa14.5□□□□□ -0.09
MMP19-209ENST00000552872 ADAMTSL3P82987 1691 aa14.49□□□□□ -0.09
MMP19-209ENST00000552872 NOS1P29475 1434 aa14.48□□□□□ -0.09
MMP19-209ENST00000552872 KDM4FA0A1W2PPD8 638 aa14.48□□□□□ -0.09
MMP19-209ENST00000552872 PPP6R1Q9UPN7 881 aa14.48□□□□□ -0.09
MMP19-209ENST00000552872 ARHGAP31Q2M1Z3 1444 aa14.47□□□□□ -0.09
MMP19-209ENST00000552872 HIRIP3Q9BW71 556 aaPredicted RBP14.47□□□□□ -0.09
MMP19-209ENST00000552872 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
MMP19-209ENST00000552872 NBPF8Q3BBV2 869 aa14.46□□□□□ -0.09
MMP19-209ENST00000552872 KIF1BO60333 1816 aa14.46□□□□□ -0.09
MMP19-209ENST00000552872 CNTLNQ9NXG0 1405 aa14.45□□□□□ -0.1
MMP19-209ENST00000552872 PPP1R15AO75807 674 aaPredicted RBP14.45□□□□□ -0.1
MMP19-209ENST00000552872 PIK3C2BO00750 1634 aa14.44□□□□□ -0.1
MMP19-209ENST00000552872 TNRQ92752 1358 aa14.44□□□□□ -0.1
MMP19-209ENST00000552872 SPATA31E1Q6ZUB1 1445 aa14.44□□□□□ -0.1
MMP19-209ENST00000552872 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
MMP19-209ENST00000552872 PTPRMP28827 1452 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms