RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	CCDC7	Q96M83	1385 aa		10.91	□□□□□ -0.66
RPH3A-223	ENST00000552352	ARHGAP5	Q13017	1502 aa		10.91	□□□□□ -0.66
RPH3A-223	ENST00000552352	UNC13B	O14795	1591 aa		10.91	□□□□□ -0.66
RPH3A-223	ENST00000552352	SYCP2	Q9BX26	1530 aa		10.9	□□□□□ -0.66
RPH3A-223	ENST00000552352	TSPY4	P0CV99	314 aa		10.9	□□□□□ -0.67
RPH3A-223	ENST00000552352	TSPY10	P0CW01	314 aa		10.9	□□□□□ -0.67
RPH3A-223	ENST00000552352	MRS2	Q9HD23	443 aa		10.9	□□□□□ -0.67
RPH3A-223	ENST00000552352	KIF15	Q9NS87	1388 aa		10.9	□□□□□ -0.67
RPH3A-223	ENST00000552352	POLR1A	O95602	1720 aa	Predicted RBP	10.89	□□□□□ -0.67
RPH3A-223	ENST00000552352	FAM9B	Q8IZU0	186 aa		10.89	□□□□□ -0.67
RPH3A-223	ENST00000552352	ABCC1	P33527	1531 aa		10.89	□□□□□ -0.67
RPH3A-223	ENST00000552352	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.89	□□□□□ -0.67
RPH3A-223	ENST00000552352	RTN4	Q9NQC3	1192 aa	Known RBP	10.88	□□□□□ -0.67
RPH3A-223	ENST00000552352	ARHGEF12	Q9NZN5	1544 aa		10.88	□□□□□ -0.67
RPH3A-223	ENST00000552352	MAGI2	Q86UL8	1455 aa		10.88	□□□□□ -0.67
RPH3A-223	ENST00000552352	SMG6	Q86US8	1419 aa	Known RBP	10.87	□□□□□ -0.67
RPH3A-223	ENST00000552352	DUOX2	Q9NRD8	1548 aa		10.87	□□□□□ -0.67
RPH3A-223	ENST00000552352	WDR7	Q9Y4E6	1490 aa		10.86	□□□□□ -0.67
RPH3A-223	ENST00000552352	ABCA9	Q8IUA7	1624 aa		10.86	□□□□□ -0.67
RPH3A-223	ENST00000552352	ERBIN	Q96RT1	1412 aa		10.86	□□□□□ -0.67
RPH3A-223	ENST00000552352	C11orf95	C9JLR9	678 aa	Predicted RBP	10.86	□□□□□ -0.67
RPH3A-223	ENST00000552352	PAK3	O75914	559 aa	Predicted RBP	10.86	□□□□□ -0.67
RPH3A-223	ENST00000552352	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.85	□□□□□ -0.67
RPH3A-223	ENST00000552352	UHRF1BP1	Q6BDS2	1440 aa		10.85	□□□□□ -0.67
RPH3A-223	ENST00000552352	NBR1	Q14596	966 aa		10.85	□□□□□ -0.67
RPH3A-223	ENST00000552352	IQGAP3	Q86VI3	1631 aa		10.85	□□□□□ -0.67
RPH3A-223	ENST00000552352	FAM135A	Q9P2D6	1515 aa		10.84	□□□□□ -0.67
RPH3A-223	ENST00000552352	L3MBTL2	Q969R5	705 aa		10.84	□□□□□ -0.67
RPH3A-223	ENST00000552352	RNF123	Q5XPI4	1314 aa		10.84	□□□□□ -0.67
RPH3A-223	ENST00000552352	ANP32A	P39687	249 aa	Known RBP	10.84	□□□□□ -0.67
RPH3A-223	ENST00000552352	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
RPH3A-223	ENST00000552352	IPO9	Q96P70	1041 aa	Known RBP	10.84	□□□□□ -0.67
RPH3A-223	ENST00000552352	SPATA31E1	Q6ZUB1	1445 aa		10.83	□□□□□ -0.68
RPH3A-223	ENST00000552352	EFCAB2	Q5VUJ9	269 aa		10.83	□□□□□ -0.68
RPH3A-223	ENST00000552352	NUP155	O75694	1391 aa		10.83	□□□□□ -0.68
RPH3A-223	ENST00000552352	ATP10A	O60312	1499 aa		10.82	□□□□□ -0.68
RPH3A-223	ENST00000552352	KIF7	Q2M1P5	1343 aa		10.82	□□□□□ -0.68
RPH3A-223	ENST00000552352	NUDC	Q9Y266	331 aa		10.82	□□□□□ -0.68
RPH3A-223	ENST00000552352	PKD2	Q13563	968 aa		10.81	□□□□□ -0.68
RPH3A-223	ENST00000552352	CCDC136	Q96JN2	1154 aa		10.81	□□□□□ -0.68
RPH3A-223	ENST00000552352	RTL5	Q5HYW3	569 aa	Predicted RBP	10.8	□□□□□ -0.68
RPH3A-223	ENST00000552352	ZFYVE16	Q7Z3T8	1539 aa		10.79	□□□□□ -0.68
RPH3A-223	ENST00000552352	INO80	Q9ULG1	1556 aa	Predicted RBP	10.79	□□□□□ -0.68
RPH3A-223	ENST00000552352	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.79	□□□□□ -0.68
RPH3A-223	ENST00000552352	RALGAPB	Q86X10	1494 aa		10.79	□□□□□ -0.68
RPH3A-223	ENST00000552352	NBPF8	Q3BBV2	869 aa		10.78	□□□□□ -0.68
RPH3A-223	ENST00000552352	DEPDC5	O75140	1603 aa		10.78	□□□□□ -0.68
RPH3A-223	ENST00000552352	DHX29	Q7Z478	1369 aa	Known RBP	10.78	□□□□□ -0.68
RPH3A-223	ENST00000552352	CFAP74	Q9C0B2	1584 aa		10.77	□□□□□ -0.69
RPH3A-223	ENST00000552352	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.77	□□□□□ -0.69
RPH3A-223	ENST00000552352	TRAPPC8	Q9Y2L5	1435 aa		10.77	□□□□□ -0.69
RPH3A-223	ENST00000552352	PRKCSH	P14314	528 aa	Predicted RBP	10.77	□□□□□ -0.69
RPH3A-223	ENST00000552352	ASXL2	Q76L83	1435 aa		10.76	□□□□□ -0.69
RPH3A-223	ENST00000552352	OSCAR	Q8IYS5	282 aa		10.76	□□□□□ -0.69
RPH3A-223	ENST00000552352	VWDE	Q8N2E2	1590 aa		10.75	□□□□□ -0.69
RPH3A-223	ENST00000552352	FANCA	O15360	1455 aa		10.75	□□□□□ -0.69
RPH3A-223	ENST00000552352	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.75	□□□□□ -0.69
RPH3A-223	ENST00000552352	KDM5C	P41229	1560 aa		10.75	□□□□□ -0.69
RPH3A-223	ENST00000552352	LAMC1	P11047	1609 aa		10.74	□□□□□ -0.69
RPH3A-223	ENST00000552352	ATP7A	Q04656	1500 aa		10.74	□□□□□ -0.69
RPH3A-223	ENST00000552352	NEURL4	Q96JN8	1562 aa		10.74	□□□□□ -0.69
RPH3A-223	ENST00000552352	PLA2R1	Q13018	1463 aa		10.74	□□□□□ -0.69
RPH3A-223	ENST00000552352	CCDC144A	A2RUR9	1427 aa		10.72	□□□□□ -0.69
RPH3A-223	ENST00000552352	BCORL1	Q5H9F3	1711 aa		10.72	□□□□□ -0.69
RPH3A-223	ENST00000552352	SPAG9	O60271	1321 aa	Known RBP	10.71	□□□□□ -0.69
RPH3A-223	ENST00000552352	ADGRL1	O94910	1474 aa		10.71	□□□□□ -0.69
RPH3A-223	ENST00000552352	PRDM15	P57071	1507 aa	Predicted RBP	10.71	□□□□□ -0.69
RPH3A-223	ENST00000552352	TET3	O43151	1660 aa		10.71	□□□□□ -0.7
RPH3A-223	ENST00000552352	USP35	Q9P2H5	1018 aa		10.71	□□□□□ -0.7
RPH3A-223	ENST00000552352	TRPM2	O94759	1503 aa		10.7	□□□□□ -0.7
RPH3A-223	ENST00000552352	PNISR	Q8TF01	805 aa	Known RBP	10.7	□□□□□ -0.7
RPH3A-223	ENST00000552352	GPRASP1	Q5JY77	1395 aa		10.7	□□□□□ -0.7
RPH3A-223	ENST00000552352	PTPRT	O14522	1441 aa		10.7	□□□□□ -0.7
RPH3A-223	ENST00000552352	TRPM1	Q7Z4N2	1603 aa		10.7	□□□□□ -0.7
RPH3A-223	ENST00000552352	USP47	Q96K76	1375 aa		10.69	□□□□□ -0.7
RPH3A-223	ENST00000552352	TCERG1	O14776	1098 aa	Known RBP	10.69	□□□□□ -0.7
RPH3A-223	ENST00000552352	ROCK2	O75116	1388 aa	Known RBP	10.69	□□□□□ -0.7
RPH3A-223	ENST00000552352	PRAG1	Q86YV5	1406 aa		10.69	□□□□□ -0.7
RPH3A-223	ENST00000552352	ZNF518A	Q6AHZ1	1483 aa		10.69	□□□□□ -0.7
RPH3A-223	ENST00000552352	LMTK2	Q8IWU2	1503 aa		10.69	□□□□□ -0.7
RPH3A-223	ENST00000552352	LRPPRC	P42704	1394 aa	Known RBP	10.68	□□□□□ -0.7
RPH3A-223	ENST00000552352	DAXX	Q9UER7	740 aa	Predicted RBP	10.68	□□□□□ -0.7
RPH3A-223	ENST00000552352		E9PCH4	1651 aa		10.68	□□□□□ -0.7
RPH3A-223	ENST00000552352	RNF17	Q9BXT8	1623 aa	Known RBP	10.68	□□□□□ -0.7
RPH3A-223	ENST00000552352	A2M	P01023	1474 aa		10.68	□□□□□ -0.7
RPH3A-223	ENST00000552352	SCAPER	Q9BY12	1400 aa		10.68	□□□□□ -0.7
RPH3A-223	ENST00000552352	STAC3	Q96MF2	364 aa		10.67	□□□□□ -0.7
RPH3A-223	ENST00000552352	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.67	□□□□□ -0.7
RPH3A-223	ENST00000552352	MROH1	Q8NDA8	1641 aa		10.67	□□□□□ -0.7
RPH3A-223	ENST00000552352	NEO1	Q92859	1461 aa		10.67	□□□□□ -0.7
RPH3A-223	ENST00000552352	RRP1	P56182	461 aa	Known RBP	10.67	□□□□□ -0.7
RPH3A-223	ENST00000552352	RNF216	Q9NWF9	866 aa	Predicted RBP	10.67	□□□□□ -0.7
RPH3A-223	ENST00000552352	MLH3	Q9UHC1	1453 aa		10.67	□□□□□ -0.7
RPH3A-223	ENST00000552352	KIDINS220	Q9ULH0	1771 aa		10.67	□□□□□ -0.7
RPH3A-223	ENST00000552352	KTN1	Q86UP2	1357 aa	Known RBP	10.66	□□□□□ -0.7
RPH3A-223	ENST00000552352	MS4A1	P11836	297 aa		10.66	□□□□□ -0.7
RPH3A-223	ENST00000552352	TMC1	Q8TDI8	760 aa		10.66	□□□□□ -0.7
RPH3A-223	ENST00000552352	DMRT2	Q9Y5R5	561 aa		10.66	□□□□□ -0.7
RPH3A-223	ENST00000552352	SPHKAP	Q2M3C7	1700 aa		10.66	□□□□□ -0.7
RPH3A-223	ENST00000552352	POGZ	Q7Z3K3	1410 aa		10.66	□□□□□ -0.7

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