RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 C3P01024 1663 aa28.22■■■□□ 2.11
PRPF40B-216ENST00000552301 ADGRL2O95490 1459 aa28.21■■■□□ 2.11
PRPF40B-216ENST00000552301 NCOA1Q15788 1441 aa28.2■■■□□ 2.11
PRPF40B-216ENST00000552301 FAM135AQ9P2D6 1515 aa28.2■■■□□ 2.1
PRPF40B-216ENST00000552301 RRBP1Q9P2E9 1410 aaKnown RBP28.19■■■□□ 2.1
PRPF40B-216ENST00000552301 RNF17Q9BXT8 1623 aaKnown RBP28.19■■■□□ 2.1
PRPF40B-216ENST00000552301 ITGAEP38570 1179 aa28.18■■■□□ 2.1
PRPF40B-216ENST00000552301 KDM5DQ9BY66 1539 aa28.18■■■□□ 2.1
PRPF40B-216ENST00000552301 ZMYM3Q14202 1370 aa28.17■■■□□ 2.1
PRPF40B-216ENST00000552301 WASHC2CQ9Y4E1 1318 aa28.16■■■□□ 2.1
PRPF40B-216ENST00000552301 PTPRKQ15262 1439 aa28.13■■■□□ 2.09
PRPF40B-216ENST00000552301 SETD1BQ9UPS6 1966 aaKnown RBP28.11■■■□□ 2.09
PRPF40B-216ENST00000552301 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
PRPF40B-216ENST00000552301 PREX1Q8TCU6 1659 aa28.1■■■□□ 2.09
PRPF40B-216ENST00000552301 LMTK3Q96Q04 1460 aa28.1■■■□□ 2.09
PRPF40B-216ENST00000552301 ZC3H13Q5T200 1668 aaKnown RBP28.09■■■□□ 2.09
PRPF40B-216ENST00000552301 NPATQ14207 1427 aa28.09■■■□□ 2.09
PRPF40B-216ENST00000552301 UHRF1BP1Q6BDS2 1440 aa28.08■■■□□ 2.09
PRPF40B-216ENST00000552301 ANKRD50Q9ULJ7 1429 aa28.08■■■□□ 2.09
PRPF40B-216ENST00000552301 MROH1Q8NDA8 1641 aa28.07■■■□□ 2.08
PRPF40B-216ENST00000552301 PRDM15P57071 1507 aaPredicted RBP28.07■■■□□ 2.08
PRPF40B-216ENST00000552301 KANK1Q14678 1352 aa28.06■■■□□ 2.08
PRPF40B-216ENST00000552301 ABCC3O15438 1527 aa28.06■■■□□ 2.08
PRPF40B-216ENST00000552301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.05■■■□□ 2.08
PRPF40B-216ENST00000552301 DEPDC5O75140 1603 aa28.03■■■□□ 2.08
PRPF40B-216ENST00000552301 PZPP20742 1482 aa28.02■■■□□ 2.08
PRPF40B-216ENST00000552301 CEP152O94986 1710 aa28.02■■■□□ 2.08
PRPF40B-216ENST00000552301 HSPA2P54652 639 aa27.98■■■□□ 2.07
PRPF40B-216ENST00000552301 CAMSAP1Q5T5Y3 1602 aa27.97■■■□□ 2.07
PRPF40B-216ENST00000552301 MYO3AQ8NEV4 1616 aa27.94■■■□□ 2.06
PRPF40B-216ENST00000552301 ILDR1Q86SU0 546 aaPredicted RBP27.94■■■□□ 2.06
PRPF40B-216ENST00000552301 TNRQ92752 1358 aa27.94■■■□□ 2.06
PRPF40B-216ENST00000552301 FBXO31Q5XUX0 539 aaPredicted RBP27.92■■■□□ 2.06
PRPF40B-216ENST00000552301 VWDEQ8N2E2 1590 aa27.9■■■□□ 2.06
PRPF40B-216ENST00000552301 UNC13BO14795 1591 aa27.9■■■□□ 2.06
PRPF40B-216ENST00000552301 LMTK2Q8IWU2 1503 aa27.89■■■□□ 2.06
PRPF40B-216ENST00000552301 CEP170BQ9Y4F5 1589 aaPredicted RBP27.87■■■□□ 2.05
PRPF40B-216ENST00000552301 ARHGAP31Q2M1Z3 1444 aa27.87■■■□□ 2.05
PRPF40B-216ENST00000552301 ERVK-7P63135 1459 aa27.87■■■□□ 2.05
PRPF40B-216ENST00000552301 ZNF142P52746 1687 aaPredicted RBP27.87■■■□□ 2.05
PRPF40B-216ENST00000552301 GCC2Q8IWJ2 1684 aa27.86■■■□□ 2.05
PRPF40B-216ENST00000552301 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
PRPF40B-216ENST00000552301 A2ML1A8K2U0 1454 aa27.84■■■□□ 2.05
PRPF40B-216ENST00000552301 CFAP65Q6ZU64 1925 aaKnown RBP27.84■■■□□ 2.05
PRPF40B-216ENST00000552301 NAIPQ13075 1403 aa27.84■■■□□ 2.05
PRPF40B-216ENST00000552301 EFCAB6Q5THR3 1501 aa27.83■■■□□ 2.05
PRPF40B-216ENST00000552301 NLRP1Q9C000 1473 aa27.83■■■□□ 2.04
PRPF40B-216ENST00000552301 HFM1A2PYH4 1435 aa27.82■■■□□ 2.04
PRPF40B-216ENST00000552301 NUP155O75694 1391 aa27.8■■■□□ 2.04
PRPF40B-216ENST00000552301 TET3O43151 1660 aa27.8■■■□□ 2.04
PRPF40B-216ENST00000552301 IQGAP3Q86VI3 1631 aa27.78■■■□□ 2.04
PRPF40B-216ENST00000552301 RPRD2Q5VT52 1461 aaKnown RBP27.75■■■□□ 2.03
PRPF40B-216ENST00000552301 UGGT1Q9NYU2 1555 aa27.73■■■□□ 2.03
PRPF40B-216ENST00000552301 PLA2R1Q13018 1463 aa27.72■■■□□ 2.03
PRPF40B-216ENST00000552301 DMRT2Q9Y5R5 561 aa27.71■■■□□ 2.03
PRPF40B-216ENST00000552301 STRCQ7RTU9 1775 aa27.71■■■□□ 2.03
PRPF40B-216ENST00000552301 THEMISQ8N1K5 641 aaPredicted RBP27.69■■■□□ 2.02
PRPF40B-216ENST00000552301 TRIM52Q96A61 297 aa27.68■■■□□ 2.02
PRPF40B-216ENST00000552301 NOS1P29475 1434 aa27.67■■■□□ 2.02
PRPF40B-216ENST00000552301 E9PCH4 1651 aa27.66■■■□□ 2.02
PRPF40B-216ENST00000552301 SYNMO15061 1565 aa27.65■■■□□ 2.02
PRPF40B-216ENST00000552301 PKD2Q13563 968 aa27.65■■■□□ 2.02
PRPF40B-216ENST00000552301 STAG3Q9UJ98 1225 aa27.64■■■□□ 2.02
PRPF40B-216ENST00000552301 NCKAP5LQ9HCH0 1330 aa27.63■■■□□ 2.01
PRPF40B-216ENST00000552301 PTPRTO14522 1441 aa27.61■■■□□ 2.01
PRPF40B-216ENST00000552301 PIK3C2BO00750 1634 aa27.61■■■□□ 2.01
PRPF40B-216ENST00000552301 SLC52A1Q9NWF4 448 aa27.61■■■□□ 2.01
PRPF40B-216ENST00000552301 UBR1Q8IWV7 1749 aa27.61■■■□□ 2.01
PRPF40B-216ENST00000552301 POLR1AO95602 1720 aaPredicted RBP27.58■■■□□ 2.01
PRPF40B-216ENST00000552301 IDI1Q13907 227 aa27.58■■■□□ 2.01
PRPF40B-216ENST00000552301 ANKLE2Q86XL3 938 aa27.58■■■□□ 2.01
PRPF40B-216ENST00000552301 SETD5Q9C0A6 1442 aa27.58■■■□□ 2
PRPF40B-216ENST00000552301 ACIN1Q9UKV3 1341 aaKnown RBP27.55■■■□□ 2
PRPF40B-216ENST00000552301 ADGRB3O60242 1522 aa27.55■■■□□ 2
PRPF40B-216ENST00000552301 KDM5AP29375 1690 aaKnown RBP27.54■■■□□ 2
PRPF40B-216ENST00000552301 SLC4A1APQ9BWU0 796 aaKnown RBP27.54■■■□□ 2
PRPF40B-216ENST00000552301 FBXO41Q8TF61 875 aa27.53■■■□□ 2
PRPF40B-216ENST00000552301 SPHKAPQ2M3C7 1700 aa27.52■■■□□ 2
PRPF40B-216ENST00000552301 NEURL4Q96JN8 1562 aa27.49■■□□□ 1.99
PRPF40B-216ENST00000552301 EID1Q9Y6B2 187 aa27.49■■□□□ 1.99
PRPF40B-216ENST00000552301 SLIT1O75093 1534 aa27.49■■□□□ 1.99
PRPF40B-216ENST00000552301 RAB3GAP2Q9H2M9 1393 aa27.48■■□□□ 1.99
PRPF40B-216ENST00000552301 CHGAP10645 457 aaKnown RBP27.48■■□□□ 1.99
PRPF40B-216ENST00000552301 SCAF11Q99590 1463 aaKnown RBP27.48■■□□□ 1.99
PRPF40B-216ENST00000552301 ARHGAP23Q9P227 1491 aa27.48■■□□□ 1.99
PRPF40B-216ENST00000552301 TMEM2Q9UHN6 1383 aa27.48■■□□□ 1.99
PRPF40B-216ENST00000552301 NPHP4O75161 1426 aaPredicted RBP27.47■■□□□ 1.99
PRPF40B-216ENST00000552301 TXNDC2Q86VQ3 553 aa27.45■■□□□ 1.98
PRPF40B-216ENST00000552301 MED14O60244 1454 aa27.44■■□□□ 1.98
PRPF40B-216ENST00000552301 TRPM2O94759 1503 aa27.43■■□□□ 1.98
PRPF40B-216ENST00000552301 IQGAP1P46940 1657 aa27.43■■□□□ 1.98
PRPF40B-216ENST00000552301 TMEM131LA2VDJ0 1609 aa27.42■■□□□ 1.98
PRPF40B-216ENST00000552301 MYO5BQ9ULV0 1848 aa27.41■■□□□ 1.98
PRPF40B-216ENST00000552301 MPHOSPH9Q99550 1183 aa27.4■■□□□ 1.98
PRPF40B-216ENST00000552301 LTKP29376 864 aa27.39■■□□□ 1.98
PRPF40B-216ENST00000552301 HDGFP51858 240 aaKnown RBP27.38■■□□□ 1.97
PRPF40B-216ENST00000552301 RIMS2Q9UQ26 1411 aa27.36■■□□□ 1.97
PRPF40B-216ENST00000552301 PPP1R15AO75807 674 aaPredicted RBP27.36■■□□□ 1.97
PRPF40B-216ENST00000552301 CLTCL1P53675 1640 aa27.36■■□□□ 1.97
PRPF40B-216ENST00000552301 ZNF335Q9H4Z2 1342 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms