RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 RICTORQ6R327 1708 aa15.92■□□□□ 0.14
SLC38A1-210ENST00000552197 TEX14Q8IWB6 1497 aa15.92■□□□□ 0.14
SLC38A1-210ENST00000552197 PPP1R15AO75807 674 aaPredicted RBP15.91■□□□□ 0.14
SLC38A1-210ENST00000552197 DNAJC5Q9H3Z4 198 aa15.9■□□□□ 0.14
SLC38A1-210ENST00000552197 A2MP01023 1474 aa15.9■□□□□ 0.14
SLC38A1-210ENST00000552197 IQGAP3Q86VI3 1631 aa15.89■□□□□ 0.13
SLC38A1-210ENST00000552197 ABCA6Q8N139 1617 aa15.89■□□□□ 0.13
SLC38A1-210ENST00000552197 MAGI2Q86UL8 1455 aa15.88■□□□□ 0.13
SLC38A1-210ENST00000552197 ZNF316A6NFI3 1004 aaPredicted RBP15.88■□□□□ 0.13
SLC38A1-210ENST00000552197 RPRD2Q5VT52 1461 aaKnown RBP15.87■□□□□ 0.13
SLC38A1-210ENST00000552197 FRMPD1Q5SYB0 1578 aa15.87■□□□□ 0.13
SLC38A1-210ENST00000552197 L3MBTL2Q969R5 705 aa15.86■□□□□ 0.13
SLC38A1-210ENST00000552197 YEATS2Q9ULM3 1422 aa15.86■□□□□ 0.13
SLC38A1-210ENST00000552197 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
SLC38A1-210ENST00000552197 GGT6Q6P531 493 aa15.85■□□□□ 0.13
SLC38A1-210ENST00000552197 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
SLC38A1-210ENST00000552197 EIF2AK4Q9P2K8 1649 aaKnown RBP15.85■□□□□ 0.13
SLC38A1-210ENST00000552197 KANK1Q14678 1352 aa15.84■□□□□ 0.13
SLC38A1-210ENST00000552197 DIP2CQ9Y2E4 1556 aa15.84■□□□□ 0.13
SLC38A1-210ENST00000552197 COL17A1Q9UMD9 1497 aaPredicted RBP15.82■□□□□ 0.12
SLC38A1-210ENST00000552197 MROH1Q8NDA8 1641 aa15.81■□□□□ 0.12
SLC38A1-210ENST00000552197 PRDM15P57071 1507 aaPredicted RBP15.8■□□□□ 0.12
SLC38A1-210ENST00000552197 PLA2R1Q13018 1463 aa15.79■□□□□ 0.12
SLC38A1-210ENST00000552197 ZMYM4Q5VZL5 1548 aa15.79■□□□□ 0.12
SLC38A1-210ENST00000552197 E9PCH4 1651 aa15.79■□□□□ 0.12
SLC38A1-210ENST00000552197 CCDC144AA2RUR9 1427 aa15.79■□□□□ 0.12
SLC38A1-210ENST00000552197 VWDEQ8N2E2 1590 aa15.78■□□□□ 0.12
SLC38A1-210ENST00000552197 TET3O43151 1660 aa15.77■□□□□ 0.12
SLC38A1-210ENST00000552197 RNF17Q9BXT8 1623 aaKnown RBP15.77■□□□□ 0.11
SLC38A1-210ENST00000552197 CEP152O94986 1710 aa15.77■□□□□ 0.11
SLC38A1-210ENST00000552197 WASHC2CQ9Y4E1 1318 aa15.76■□□□□ 0.11
SLC38A1-210ENST00000552197 RGL3Q3MIN7 710 aa15.76■□□□□ 0.11
SLC38A1-210ENST00000552197 ZNF326Q5BKZ1 582 aaKnown RBP15.76■□□□□ 0.11
SLC38A1-210ENST00000552197 HIRIP3Q9BW71 556 aaPredicted RBP15.75■□□□□ 0.11
SLC38A1-210ENST00000552197 ATP10AO60312 1499 aa15.75■□□□□ 0.11
SLC38A1-210ENST00000552197 NBPF8Q3BBV2 869 aa15.75■□□□□ 0.11
SLC38A1-210ENST00000552197 CFAP65Q6ZU64 1925 aaKnown RBP15.75■□□□□ 0.11
SLC38A1-210ENST00000552197 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
SLC38A1-210ENST00000552197 BCORL1Q5H9F3 1711 aa15.73■□□□□ 0.11
SLC38A1-210ENST00000552197 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
SLC38A1-210ENST00000552197 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
SLC38A1-210ENST00000552197 SPHKAPQ2M3C7 1700 aa15.72■□□□□ 0.11
SLC38A1-210ENST00000552197 EFCAB6Q5THR3 1501 aa15.71■□□□□ 0.11
SLC38A1-210ENST00000552197 MLECQ14165 292 aa15.7■□□□□ 0.1
SLC38A1-210ENST00000552197 LMTK2Q8IWU2 1503 aa15.69■□□□□ 0.1
SLC38A1-210ENST00000552197 ABCC3O15438 1527 aa15.69■□□□□ 0.1
SLC38A1-210ENST00000552197 PTPRTO14522 1441 aa15.69■□□□□ 0.1
SLC38A1-210ENST00000552197 TRPM2O94759 1503 aa15.69■□□□□ 0.1
SLC38A1-210ENST00000552197 SIGLEC1Q9BZZ2 1709 aa15.67■□□□□ 0.1
SLC38A1-210ENST00000552197 NPATQ14207 1427 aa15.67■□□□□ 0.1
SLC38A1-210ENST00000552197 ARHGEF40Q8TER5 1519 aa15.67■□□□□ 0.1
SLC38A1-210ENST00000552197 CLTCL1P53675 1640 aa15.66■□□□□ 0.1
SLC38A1-210ENST00000552197 UGGT1Q9NYU2 1555 aa15.66■□□□□ 0.1
SLC38A1-210ENST00000552197 CAMSAP1Q5T5Y3 1602 aa15.66■□□□□ 0.1
SLC38A1-210ENST00000552197 REREQ9P2R6 1566 aa15.65■□□□□ 0.1
SLC38A1-210ENST00000552197 ARID4BQ4LE39 1312 aaPredicted RBP15.64■□□□□ 0.09
SLC38A1-210ENST00000552197 AGLP35573 1532 aa15.63■□□□□ 0.09
SLC38A1-210ENST00000552197 HSPA5P11021 654 aaKnown RBP15.63■□□□□ 0.09
SLC38A1-210ENST00000552197 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
SLC38A1-210ENST00000552197 EIF4G2P78344 907 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■■■□□ 15
SLC38A1-210ENST00000552197 SPATA31E1Q6ZUB1 1445 aa15.62■□□□□ 0.09
SLC38A1-210ENST00000552197 ZC3H13Q5T200 1668 aaKnown RBP15.62■□□□□ 0.09
SLC38A1-210ENST00000552197 UHRF1BP1Q6BDS2 1440 aa15.61■□□□□ 0.09
SLC38A1-210ENST00000552197 KIF1BO60333 1816 aa15.59■□□□□ 0.09
SLC38A1-210ENST00000552197 CLTCQ00610 1675 aaKnown RBP15.58■□□□□ 0.08
SLC38A1-210ENST00000552197 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.08
SLC38A1-210ENST00000552197 PRAG1Q86YV5 1406 aa15.58■□□□□ 0.08
SLC38A1-210ENST00000552197 CNTLNQ9NXG0 1405 aa15.58■□□□□ 0.08
SLC38A1-210ENST00000552197 ARHGAP31Q2M1Z3 1444 aa15.57■□□□□ 0.08
SLC38A1-210ENST00000552197 CARD11Q9BXL7 1154 aa15.57■□□□□ 0.08
SLC38A1-210ENST00000552197 ESF1Q9H501 851 aaKnown RBP15.57■□□□□ 0.08
SLC38A1-210ENST00000552197 PPP6R1Q9UPN7 881 aa15.57■□□□□ 0.08
SLC38A1-210ENST00000552197 NOS1P29475 1434 aa15.56■□□□□ 0.08
SLC38A1-210ENST00000552197 RALGAPBQ86X10 1494 aa15.56■□□□□ 0.08
SLC38A1-210ENST00000552197 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
SLC38A1-210ENST00000552197 NBPF1Q3BBV0 1214 aa15.55■□□□□ 0.08
SLC38A1-210ENST00000552197 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
SLC38A1-210ENST00000552197 SYNMO15061 1565 aa15.55■□□□□ 0.08
SLC38A1-210ENST00000552197 MROH2AA6NES4 1674 aa15.54■□□□□ 0.08
SLC38A1-210ENST00000552197 PREX1Q8TCU6 1659 aa15.54■□□□□ 0.08
SLC38A1-210ENST00000552197 IDI1Q13907 227 aa15.53■□□□□ 0.08
SLC38A1-210ENST00000552197 USP47Q96K76 1375 aa15.53■□□□□ 0.08
SLC38A1-210ENST00000552197 TRPM1Q7Z4N2 1603 aa15.53■□□□□ 0.08
SLC38A1-210ENST00000552197 ADGRB3O60242 1522 aa15.5■□□□□ 0.07
SLC38A1-210ENST00000552197 MIER1Q8N108 512 aa15.5■□□□□ 0.07
SLC38A1-210ENST00000552197 SLC52A1Q9NWF4 448 aa15.5■□□□□ 0.07
SLC38A1-210ENST00000552197 PIK3C2BO00750 1634 aa15.5■□□□□ 0.07
SLC38A1-210ENST00000552197 ZMYM3Q14202 1370 aa15.5■□□□□ 0.07
SLC38A1-210ENST00000552197 ADGRF5Q8IZF2 1346 aa15.49■□□□□ 0.07
SLC38A1-210ENST00000552197 ERVK-7P63135 1459 aa15.49■□□□□ 0.07
SLC38A1-210ENST00000552197 C11orf95C9JLR9 678 aaPredicted RBP15.49■□□□□ 0.07
SLC38A1-210ENST00000552197 NUTM2DQ5VT03 806 aaPredicted RBP15.49■□□□□ 0.07
SLC38A1-210ENST00000552197 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
SLC38A1-210ENST00000552197 MADDQ8WXG6 1647 aa15.49■□□□□ 0.07
SLC38A1-210ENST00000552197 STAC3Q96MF2 364 aa15.48■□□□□ 0.07
SLC38A1-210ENST00000552197 WASHC2AQ641Q2 1341 aa15.48■□□□□ 0.07
SLC38A1-210ENST00000552197 ST20-MTHFSA0A0A6YYL1 179 aa15.47■□□□□ 0.07
SLC38A1-210ENST00000552197 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
SLC38A1-210ENST00000552197 STAG3Q9UJ98 1225 aa15.46■□□□□ 0.07
SLC38A1-210ENST00000552197 IFT172Q9UG01 1749 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms