RNA–Protein interactions for RNA: ENST00000552187.1

TMEM106C-218, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-218ENST00000552187 SYNMO15061 1565 aa13.54□□□□□ -0.24
TMEM106C-218ENST00000552187 TNRQ92752 1358 aa13.53□□□□□ -0.24
TMEM106C-218ENST00000552187 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
TMEM106C-218ENST00000552187 MED14O60244 1454 aa13.52□□□□□ -0.25
TMEM106C-218ENST00000552187 CDC42BPBQ9Y5S2 1711 aa13.52□□□□□ -0.25
TMEM106C-218ENST00000552187 CLIP1P30622 1438 aa13.51□□□□□ -0.25
TMEM106C-218ENST00000552187 FBXO31Q5XUX0 539 aaPredicted RBP13.51□□□□□ -0.25
TMEM106C-218ENST00000552187 SAMD9LQ8IVG5 1584 aa13.5□□□□□ -0.25
TMEM106C-218ENST00000552187 FAM135BQ49AJ0 1406 aa13.5□□□□□ -0.25
TMEM106C-218ENST00000552187 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
TMEM106C-218ENST00000552187 THEMISQ8N1K5 641 aaPredicted RBP13.49□□□□□ -0.25
TMEM106C-218ENST00000552187 IQGAP1P46940 1657 aa13.49□□□□□ -0.25
TMEM106C-218ENST00000552187 DEPDC5O75140 1603 aa13.49□□□□□ -0.25
TMEM106C-218ENST00000552187 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
TMEM106C-218ENST00000552187 A2MP01023 1474 aa13.48□□□□□ -0.25
TMEM106C-218ENST00000552187 PREX2Q70Z35 1606 aa13.47□□□□□ -0.25
TMEM106C-218ENST00000552187 FAM135AQ9P2D6 1515 aa13.46□□□□□ -0.25
TMEM106C-218ENST00000552187 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
TMEM106C-218ENST00000552187 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
TMEM106C-218ENST00000552187 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
TMEM106C-218ENST00000552187 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
TMEM106C-218ENST00000552187 ZNF772Q68DY9 489 aaPredicted RBP13.43□□□□□ -0.26
TMEM106C-218ENST00000552187 SYCP2Q9BX26 1530 aa13.43□□□□□ -0.26
TMEM106C-218ENST00000552187 PZPP20742 1482 aa13.42□□□□□ -0.26
TMEM106C-218ENST00000552187 ROBO1Q9Y6N7 1651 aa13.41□□□□□ -0.26
TMEM106C-218ENST00000552187 HNRNPMP52272 730 aaKnown RBP eCLIP13.41□□□□□ -0.26
TMEM106C-218ENST00000552187 MEX3CQ5U5Q3 659 aaKnown RBP13.41□□□□□ -0.26
TMEM106C-218ENST00000552187 JCADQ9P266 1359 aa13.41□□□□□ -0.26
TMEM106C-218ENST00000552187 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
TMEM106C-218ENST00000552187 RXRBP28702 533 aa13.4□□□□□ -0.26
TMEM106C-218ENST00000552187 XIRP1Q702N8 1843 aaKnown RBP13.4□□□□□ -0.26
TMEM106C-218ENST00000552187 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
TMEM106C-218ENST00000552187 DCAF8L1A6NGE4 600 aa13.39□□□□□ -0.27
TMEM106C-218ENST00000552187 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
TMEM106C-218ENST00000552187 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
TMEM106C-218ENST00000552187 LRP6O75581 1613 aa13.38□□□□□ -0.27
TMEM106C-218ENST00000552187 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
TMEM106C-218ENST00000552187 TMEM94Q12767 1356 aa13.36□□□□□ -0.27
TMEM106C-218ENST00000552187 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
TMEM106C-218ENST00000552187 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
TMEM106C-218ENST00000552187 CDC42BPAQ5VT25 1732 aa13.35□□□□□ -0.27
TMEM106C-218ENST00000552187 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
TMEM106C-218ENST00000552187 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
TMEM106C-218ENST00000552187 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
TMEM106C-218ENST00000552187 LRRC9Q6ZRR7 1453 aa13.33□□□□□ -0.28
TMEM106C-218ENST00000552187 WASHC2CQ9Y4E1 1318 aa13.33□□□□□ -0.28
TMEM106C-218ENST00000552187 ADGBQ8N7X0 1667 aa13.32□□□□□ -0.28
TMEM106C-218ENST00000552187 SCAF11Q99590 1463 aaKnown RBP13.32□□□□□ -0.28
TMEM106C-218ENST00000552187 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
TMEM106C-218ENST00000552187 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
TMEM106C-218ENST00000552187 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
TMEM106C-218ENST00000552187 LRRIQ1Q96JM4 1722 aa13.31□□□□□ -0.28
TMEM106C-218ENST00000552187 KIF3BO15066 747 aa13.31□□□□□ -0.28
TMEM106C-218ENST00000552187 RGS12O14924 1447 aa13.3□□□□□ -0.28
TMEM106C-218ENST00000552187 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
TMEM106C-218ENST00000552187 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
TMEM106C-218ENST00000552187 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
TMEM106C-218ENST00000552187 LTKP29376 864 aa13.29□□□□□ -0.28
TMEM106C-218ENST00000552187 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
TMEM106C-218ENST00000552187 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
TMEM106C-218ENST00000552187 PLEKHH2Q8IVE3 1493 aa13.29□□□□□ -0.28
TMEM106C-218ENST00000552187 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
TMEM106C-218ENST00000552187 DHX29Q7Z478 1369 aaKnown RBP13.28□□□□□ -0.28
TMEM106C-218ENST00000552187 GPATCH8Q9UKJ3 1502 aaKnown RBP13.28□□□□□ -0.28
TMEM106C-218ENST00000552187 COL16A1Q07092 1604 aaPredicted RBP13.28□□□□□ -0.28
TMEM106C-218ENST00000552187 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
TMEM106C-218ENST00000552187 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
TMEM106C-218ENST00000552187 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
TMEM106C-218ENST00000552187 FGD6Q6ZV73 1430 aa13.26□□□□□ -0.29
TMEM106C-218ENST00000552187 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
TMEM106C-218ENST00000552187 AFF2P51816 1311 aa13.25□□□□□ -0.29
TMEM106C-218ENST00000552187 MSH6P52701 1360 aa13.24□□□□□ -0.29
TMEM106C-218ENST00000552187 KCNA6P17658 529 aa13.24□□□□□ -0.29
TMEM106C-218ENST00000552187 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
TMEM106C-218ENST00000552187 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
TMEM106C-218ENST00000552187 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
TMEM106C-218ENST00000552187 EID1Q9Y6B2 187 aa13.22□□□□□ -0.29
TMEM106C-218ENST00000552187 ERVK-7P63135 1459 aa13.22□□□□□ -0.29
TMEM106C-218ENST00000552187 ARHGAP23Q9P227 1491 aa13.22□□□□□ -0.29
TMEM106C-218ENST00000552187 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
TMEM106C-218ENST00000552187 TIAM1Q13009 1591 aa13.21□□□□□ -0.29
TMEM106C-218ENST00000552187 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
TMEM106C-218ENST00000552187 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
TMEM106C-218ENST00000552187 SLIT1O75093 1534 aa13.21□□□□□ -0.29
TMEM106C-218ENST00000552187 PRDM15P57071 1507 aaPredicted RBP13.21□□□□□ -0.29
TMEM106C-218ENST00000552187 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
TMEM106C-218ENST00000552187 EEA1Q15075 1411 aa13.2□□□□□ -0.3
TMEM106C-218ENST00000552187 ZNF644Q9H582 1327 aaPredicted RBP13.19□□□□□ -0.3
TMEM106C-218ENST00000552187 SHPRHQ149N8 1683 aa13.19□□□□□ -0.3
TMEM106C-218ENST00000552187 QTRT2Q9H974 415 aaKnown RBP13.19□□□□□ -0.3
TMEM106C-218ENST00000552187 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
TMEM106C-218ENST00000552187 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
TMEM106C-218ENST00000552187 EP400Q96L91 3159 aa13.18□□□□□ -0.3
TMEM106C-218ENST00000552187 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
TMEM106C-218ENST00000552187 MBD5Q9P267 1494 aa13.16□□□□□ -0.3
TMEM106C-218ENST00000552187 UBTFP17480 764 aaKnown RBP13.16□□□□□ -0.3
TMEM106C-218ENST00000552187 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
TMEM106C-218ENST00000552187 ABCC3O15438 1527 aa13.15□□□□□ -0.3
TMEM106C-218ENST00000552187 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
TMEM106C-218ENST00000552187 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms