RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
RBFOX1-214ENST00000552089 TRIM52Q96A61 297 aa19.19■□□□□ 0.66
RBFOX1-214ENST00000552089 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
RBFOX1-214ENST00000552089 ATP7AQ04656 1500 aa19.17■□□□□ 0.66
RBFOX1-214ENST00000552089 FBXO31Q5XUX0 539 aaPredicted RBP19.17■□□□□ 0.66
RBFOX1-214ENST00000552089 FAM135AQ9P2D6 1515 aa19.16■□□□□ 0.66
RBFOX1-214ENST00000552089 UGGT1Q9NYU2 1555 aa19.14■□□□□ 0.66
RBFOX1-214ENST00000552089 SYCP2Q9BX26 1530 aa19.14■□□□□ 0.65
RBFOX1-214ENST00000552089 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-214ENST00000552089 PZPP20742 1482 aa19.11■□□□□ 0.65
RBFOX1-214ENST00000552089 NLRP1Q9C000 1473 aa19.11■□□□□ 0.65
RBFOX1-214ENST00000552089 FMN1Q68DA7 1419 aa19.11■□□□□ 0.65
RBFOX1-214ENST00000552089 ZNF777Q9ULD5 760 aaPredicted RBP19.09■□□□□ 0.65
RBFOX1-214ENST00000552089 ROBO1Q9Y6N7 1651 aa19.09■□□□□ 0.65
RBFOX1-214ENST00000552089 XIRP1Q702N8 1843 aaKnown RBP19.07■□□□□ 0.64
RBFOX1-214ENST00000552089 HNRNPMP52272 730 aaKnown RBP eCLIP19.07■□□□□ 0.64
RBFOX1-214ENST00000552089 EHMT2Q96KQ7 1210 aa19.07■□□□□ 0.64
RBFOX1-214ENST00000552089 MIA2Q96PC5 1412 aa19.06■□□□□ 0.64
RBFOX1-214ENST00000552089 ZNF772Q68DY9 489 aaPredicted RBP19.06■□□□□ 0.64
RBFOX1-214ENST00000552089 JCADQ9P266 1359 aa19.06■□□□□ 0.64
RBFOX1-214ENST00000552089 ZC3H13Q5T200 1668 aaKnown RBP19.06■□□□□ 0.64
RBFOX1-214ENST00000552089 CDC42BPAQ5VT25 1732 aa19.05■□□□□ 0.64
RBFOX1-214ENST00000552089 KDM5DQ9BY66 1539 aa19.03■□□□□ 0.64
RBFOX1-214ENST00000552089 LRP6O75581 1613 aa19.02■□□□□ 0.63
RBFOX1-214ENST00000552089 ADGBQ8N7X0 1667 aa19.02■□□□□ 0.63
RBFOX1-214ENST00000552089 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
RBFOX1-214ENST00000552089 RXRBP28702 533 aa19■□□□□ 0.63
RBFOX1-214ENST00000552089 LRRIQ1Q96JM4 1722 aa19■□□□□ 0.63
RBFOX1-214ENST00000552089 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
RBFOX1-214ENST00000552089 CDK12Q9NYV4 1490 aaPredicted RBP19■□□□□ 0.63
RBFOX1-214ENST00000552089 PHLPP1O60346 1717 aa18.98■□□□□ 0.63
RBFOX1-214ENST00000552089 TMEM94Q12767 1356 aa18.97■□□□□ 0.63
RBFOX1-214ENST00000552089 KIAA1107Q9UPP5 1409 aa18.97■□□□□ 0.63
RBFOX1-214ENST00000552089 SCAF11Q99590 1463 aaKnown RBP18.96■□□□□ 0.63
RBFOX1-214ENST00000552089 PLEKHH2Q8IVE3 1493 aa18.96■□□□□ 0.63
RBFOX1-214ENST00000552089 WASHC2CQ9Y4E1 1318 aa18.94■□□□□ 0.62
RBFOX1-214ENST00000552089 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
RBFOX1-214ENST00000552089 SPATA31A6Q5VVP1 1343 aa18.93■□□□□ 0.62
RBFOX1-214ENST00000552089 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
RBFOX1-214ENST00000552089 GPATCH8Q9UKJ3 1502 aaKnown RBP18.93■□□□□ 0.62
RBFOX1-214ENST00000552089 ARHGAP35Q9NRY4 1499 aa18.93■□□□□ 0.62
RBFOX1-214ENST00000552089 ZRANB1Q9UGI0 708 aa18.92■□□□□ 0.62
RBFOX1-214ENST00000552089 DHX29Q7Z478 1369 aaKnown RBP18.92■□□□□ 0.62
RBFOX1-214ENST00000552089 KIF3BO15066 747 aa18.91■□□□□ 0.62
RBFOX1-214ENST00000552089 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
RBFOX1-214ENST00000552089 COL16A1Q07092 1604 aaPredicted RBP18.91■□□□□ 0.62
RBFOX1-214ENST00000552089 CCDC18Q5T9S5 1454 aa18.89■□□□□ 0.62
RBFOX1-214ENST00000552089 RGS12O14924 1447 aa18.89■□□□□ 0.61
RBFOX1-214ENST00000552089 FOXD1Q16676 465 aa18.88■□□□□ 0.61
RBFOX1-214ENST00000552089 RBM33Q96EV2 1170 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-214ENST00000552089 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
RBFOX1-214ENST00000552089 LTKP29376 864 aa18.87■□□□□ 0.61
RBFOX1-214ENST00000552089 CFDP1Q9UEE9 299 aaPredicted RBP18.86■□□□□ 0.61
RBFOX1-214ENST00000552089 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
RBFOX1-214ENST00000552089 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
RBFOX1-214ENST00000552089 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
RBFOX1-214ENST00000552089 TXNDC2Q86VQ3 553 aa18.85■□□□□ 0.61
RBFOX1-214ENST00000552089 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
RBFOX1-214ENST00000552089 PROSER2Q86WR7 435 aaPredicted RBP18.84■□□□□ 0.61
RBFOX1-214ENST00000552089 SLAIN2Q9P270 581 aa18.84■□□□□ 0.61
RBFOX1-214ENST00000552089 UBR1Q8IWV7 1749 aa18.84■□□□□ 0.61
RBFOX1-214ENST00000552089 ARHGAP23Q9P227 1491 aa18.84■□□□□ 0.61
RBFOX1-214ENST00000552089 MSH6P52701 1360 aa18.83■□□□□ 0.61
RBFOX1-214ENST00000552089 ERVK-7P63135 1459 aa18.83■□□□□ 0.61
RBFOX1-214ENST00000552089 NCOA2Q15596 1464 aa18.83■□□□□ 0.61
RBFOX1-214ENST00000552089 RTEL1-TNFRSF6BF6WH68 1400 aa18.83■□□□□ 0.6
RBFOX1-214ENST00000552089 SLIT1O75093 1534 aa18.83■□□□□ 0.6
RBFOX1-214ENST00000552089 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
RBFOX1-214ENST00000552089 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
RBFOX1-214ENST00000552089 KCNA6P17658 529 aa18.81■□□□□ 0.6
RBFOX1-214ENST00000552089 PRDM15P57071 1507 aaPredicted RBP18.81■□□□□ 0.6
RBFOX1-214ENST00000552089 AFF2P51816 1311 aa18.8■□□□□ 0.6
RBFOX1-214ENST00000552089 SHPRHQ149N8 1683 aa18.8■□□□□ 0.6
RBFOX1-214ENST00000552089 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
RBFOX1-214ENST00000552089 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
RBFOX1-214ENST00000552089 CASKIN1Q8WXD9 1431 aa18.78■□□□□ 0.6
RBFOX1-214ENST00000552089 NKTRP30414 1462 aaKnown RBP18.77■□□□□ 0.6
RBFOX1-214ENST00000552089 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.59
RBFOX1-214ENST00000552089 MBD5Q9P267 1494 aa18.76■□□□□ 0.59
RBFOX1-214ENST00000552089 ABCC3O15438 1527 aa18.75■□□□□ 0.59
RBFOX1-214ENST00000552089 RBM6P78332 1123 aaKnown RBP18.75■□□□□ 0.59
RBFOX1-214ENST00000552089 ZNF644Q9H582 1327 aaPredicted RBP18.75■□□□□ 0.59
RBFOX1-214ENST00000552089 AHDC1Q5TGY3 1603 aaPredicted RBP18.73■□□□□ 0.59
RBFOX1-214ENST00000552089 NWD1Q149M9 1564 aa18.72■□□□□ 0.59
RBFOX1-214ENST00000552089 SLC26A8Q96RN1 970 aa18.71■□□□□ 0.59
RBFOX1-214ENST00000552089 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
RBFOX1-214ENST00000552089 KDM5AP29375 1690 aaKnown RBP18.7■□□□□ 0.58
RBFOX1-214ENST00000552089 TMEM2Q9UHN6 1383 aa18.69■□□□□ 0.58
RBFOX1-214ENST00000552089 DIP2AQ14689 1571 aa18.67■□□□□ 0.58
RBFOX1-214ENST00000552089 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
RBFOX1-214ENST00000552089 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
RBFOX1-214ENST00000552089 CCDC141Q6ZP82 1450 aa18.65■□□□□ 0.58
RBFOX1-214ENST00000552089 EP400Q96L91 3159 aa18.65■□□□□ 0.58
RBFOX1-214ENST00000552089 TET3O43151 1660 aa18.65■□□□□ 0.58
RBFOX1-214ENST00000552089 FYCO1Q9BQS8 1478 aa18.65■□□□□ 0.58
RBFOX1-214ENST00000552089 NGLY1Q96IV0 654 aa18.65■□□□□ 0.58
RBFOX1-214ENST00000552089 LRP5O75197 1615 aa18.65■□□□□ 0.58
RBFOX1-214ENST00000552089 PIK3C2BO00750 1634 aa18.61■□□□□ 0.57
RBFOX1-214ENST00000552089 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
RBFOX1-214ENST00000552089 C14orf37Q86TY3 774 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms