RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.94■■□□□ 1.262e-9■■□□□ 12.2
SMARCD1-211ENST00000551497 PPP6R1Q9UPN7 881 aa22.94■■□□□ 1.26
SMARCD1-211ENST00000551497 ERBINQ96RT1 1412 aa22.93■■□□□ 1.26
SMARCD1-211ENST00000551497 ANKRD50Q9ULJ7 1429 aa22.93■■□□□ 1.26
SMARCD1-211ENST00000551497 WASHC2CQ9Y4E1 1318 aa22.91■■□□□ 1.26
SMARCD1-211ENST00000551497 EIF2AK4Q9P2K8 1649 aaKnown RBP22.9■■□□□ 1.26
SMARCD1-211ENST00000551497 ZMYM3Q14202 1370 aa22.89■■□□□ 1.25
SMARCD1-211ENST00000551497 CNTLNQ9NXG0 1405 aa22.87■■□□□ 1.25
SMARCD1-211ENST00000551497 CLTCQ00610 1675 aaKnown RBP22.87■■□□□ 1.25
SMARCD1-211ENST00000551497 RNF17Q9BXT8 1623 aaKnown RBP22.86■■□□□ 1.25
SMARCD1-211ENST00000551497 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
SMARCD1-211ENST00000551497 NAIPQ13075 1403 aa22.85■■□□□ 1.25
SMARCD1-211ENST00000551497 ILDR1Q86SU0 546 aaPredicted RBP22.85■■□□□ 1.25
SMARCD1-211ENST00000551497 C3P01024 1663 aa22.81■■□□□ 1.24
SMARCD1-211ENST00000551497 FBXO31Q5XUX0 539 aaPredicted RBP22.8■■□□□ 1.24
SMARCD1-211ENST00000551497 KDM5DQ9BY66 1539 aa22.8■■□□□ 1.24
SMARCD1-211ENST00000551497 HFM1A2PYH4 1435 aa22.8■■□□□ 1.24
SMARCD1-211ENST00000551497 DEPDC5O75140 1603 aa22.79■■□□□ 1.24
SMARCD1-211ENST00000551497 KANK1Q14678 1352 aa22.79■■□□□ 1.24
SMARCD1-211ENST00000551497 ABCC3O15438 1527 aa22.79■■□□□ 1.24
SMARCD1-211ENST00000551497 MROH2AA6NES4 1674 aa22.77■■□□□ 1.24
SMARCD1-211ENST00000551497 PRDM15P57071 1507 aaPredicted RBP22.77■■□□□ 1.24
SMARCD1-211ENST00000551497 CEP152O94986 1710 aa22.76■■□□□ 1.23
SMARCD1-211ENST00000551497 NUP155O75694 1391 aa22.75■■□□□ 1.23
SMARCD1-211ENST00000551497 FAM135AQ9P2D6 1515 aa22.74■■□□□ 1.23
SMARCD1-211ENST00000551497 VWDEQ8N2E2 1590 aa22.73■■□□□ 1.23
SMARCD1-211ENST00000551497 GCC2Q8IWJ2 1684 aa22.73■■□□□ 1.23
SMARCD1-211ENST00000551497 CFAP65Q6ZU64 1925 aaKnown RBP22.72■■□□□ 1.23
SMARCD1-211ENST00000551497 SETD1BQ9UPS6 1966 aaKnown RBP22.71■■□□□ 1.23
SMARCD1-211ENST00000551497 TRIM52Q96A61 297 aa22.71■■□□□ 1.23
SMARCD1-211ENST00000551497 UNC13BO14795 1591 aa22.71■■□□□ 1.23
SMARCD1-211ENST00000551497 PZPP20742 1482 aa22.7■■□□□ 1.22
SMARCD1-211ENST00000551497 ZC3H13Q5T200 1668 aaKnown RBP22.7■■□□□ 1.22
SMARCD1-211ENST00000551497 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
SMARCD1-211ENST00000551497 NPATQ14207 1427 aa22.69■■□□□ 1.22
SMARCD1-211ENST00000551497 SETD5Q9C0A6 1442 aa22.69■■□□□ 1.22
SMARCD1-211ENST00000551497 LMTK2Q8IWU2 1503 aa22.67■■□□□ 1.22
SMARCD1-211ENST00000551497 ARHGAP31Q2M1Z3 1444 aa22.66■■□□□ 1.22
SMARCD1-211ENST00000551497 HSPA2P54652 639 aa22.65■■□□□ 1.22
SMARCD1-211ENST00000551497 TNRQ92752 1358 aa22.64■■□□□ 1.22
SMARCD1-211ENST00000551497 TRIM26Q12899 539 aaPredicted RBP22.64■■□□□ 1.21
SMARCD1-211ENST00000551497 LMTK3Q96Q04 1460 aa22.63■■□□□ 1.21
SMARCD1-211ENST00000551497 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
SMARCD1-211ENST00000551497 IQGAP3Q86VI3 1631 aa22.62■■□□□ 1.21
SMARCD1-211ENST00000551497 ERVK-7P63135 1459 aa22.61■■□□□ 1.21
SMARCD1-211ENST00000551497 UHRF1BP1Q6BDS2 1440 aa22.61■■□□□ 1.21
SMARCD1-211ENST00000551497 EFCAB6Q5THR3 1501 aa22.61■■□□□ 1.21
SMARCD1-211ENST00000551497 TET3O43151 1660 aa22.6■■□□□ 1.21
SMARCD1-211ENST00000551497 PREX1Q8TCU6 1659 aa22.59■■□□□ 1.21
SMARCD1-211ENST00000551497 SLC4A1APQ9BWU0 796 aaKnown RBP22.58■■□□□ 1.21
SMARCD1-211ENST00000551497 SPATA31D1Q6ZQQ2 1576 aa22.58■■□□□ 1.2
SMARCD1-211ENST00000551497 PKD2Q13563 968 aa22.56■■□□□ 1.2
SMARCD1-211ENST00000551497 E9PCH4 1651 aa22.55■■□□□ 1.2
SMARCD1-211ENST00000551497 MPHOSPH9Q99550 1183 aa22.55■■□□□ 1.2
SMARCD1-211ENST00000551497 NOS1P29475 1434 aa22.55■■□□□ 1.2
SMARCD1-211ENST00000551497 IDI1Q13907 227 aa22.54■■□□□ 1.2
SMARCD1-211ENST00000551497 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
SMARCD1-211ENST00000551497 MYO3AQ8NEV4 1616 aa22.53■■□□□ 1.2
SMARCD1-211ENST00000551497 HRCP23327 699 aa22.53■■□□□ 1.2
SMARCD1-211ENST00000551497 FOXD1Q16676 465 aa22.53■■□□□ 1.2
SMARCD1-211ENST00000551497 A2ML1A8K2U0 1454 aa22.52■■□□□ 1.2
SMARCD1-211ENST00000551497 NLRP1Q9C000 1473 aa22.5■■□□□ 1.19
SMARCD1-211ENST00000551497 SYNMO15061 1565 aa22.5■■□□□ 1.19
SMARCD1-211ENST00000551497 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
SMARCD1-211ENST00000551497 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
SMARCD1-211ENST00000551497 SLC52A1Q9NWF4 448 aa22.48■■□□□ 1.19
SMARCD1-211ENST00000551497 THEMISQ8N1K5 641 aaPredicted RBP22.46■■□□□ 1.19
SMARCD1-211ENST00000551497 STAG3Q9UJ98 1225 aa22.45■■□□□ 1.18
SMARCD1-211ENST00000551497 ZNF142P52746 1687 aaPredicted RBP22.45■■□□□ 1.18
SMARCD1-211ENST00000551497 PTPRTO14522 1441 aa22.44■■□□□ 1.18
SMARCD1-211ENST00000551497 NCKAP5LQ9HCH0 1330 aa22.44■■□□□ 1.18
SMARCD1-211ENST00000551497 UGGT1Q9NYU2 1555 aa22.44■■□□□ 1.18
SMARCD1-211ENST00000551497 PLA2R1Q13018 1463 aa22.43■■□□□ 1.18
SMARCD1-211ENST00000551497 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
SMARCD1-211ENST00000551497 PIK3C2BO00750 1634 aa22.42■■□□□ 1.18
SMARCD1-211ENST00000551497 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
SMARCD1-211ENST00000551497 FBXO41Q8TF61 875 aa22.39■■□□□ 1.17
SMARCD1-211ENST00000551497 SPHKAPQ2M3C7 1700 aa22.39■■□□□ 1.17
SMARCD1-211ENST00000551497 STRCQ7RTU9 1775 aa22.38■■□□□ 1.17
SMARCD1-211ENST00000551497 UBR1Q8IWV7 1749 aa22.38■■□□□ 1.17
SMARCD1-211ENST00000551497 ANKLE2Q86XL3 938 aa22.36■■□□□ 1.17
SMARCD1-211ENST00000551497 LTKP29376 864 aa22.34■■□□□ 1.17
SMARCD1-211ENST00000551497 TXNDC2Q86VQ3 553 aa22.34■■□□□ 1.17
SMARCD1-211ENST00000551497 TRPM2O94759 1503 aa22.33■■□□□ 1.17
SMARCD1-211ENST00000551497 MYO5BQ9ULV0 1848 aa22.32■■□□□ 1.16
SMARCD1-211ENST00000551497 TMEM2Q9UHN6 1383 aa22.32■■□□□ 1.16
SMARCD1-211ENST00000551497 ADGRB3O60242 1522 aa22.31■■□□□ 1.16
SMARCD1-211ENST00000551497 TMEM131LA2VDJ0 1609 aa22.31■■□□□ 1.16
SMARCD1-211ENST00000551497 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
SMARCD1-211ENST00000551497 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
SMARCD1-211ENST00000551497 ARHGAP23Q9P227 1491 aa22.29■■□□□ 1.16
SMARCD1-211ENST00000551497 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
SMARCD1-211ENST00000551497 EID1Q9Y6B2 187 aa22.29■■□□□ 1.16
SMARCD1-211ENST00000551497 ANKRD30BQ9BXX2 1392 aa22.28■■□□□ 1.16
SMARCD1-211ENST00000551497 KDM5AP29375 1690 aaKnown RBP22.28■■□□□ 1.16
SMARCD1-211ENST00000551497 SLIT1O75093 1534 aa22.27■■□□□ 1.16
SMARCD1-211ENST00000551497 ZNF326Q5BKZ1 582 aaKnown RBP22.27■■□□□ 1.16
SMARCD1-211ENST00000551497 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
SMARCD1-211ENST00000551497 CCDC144AA2RUR9 1427 aa22.25■■□□□ 1.15
SMARCD1-211ENST00000551497 RIMS2Q9UQ26 1411 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms