RNA–Protein interactions for RNA: ENST00000551328.2

PSMC6-203, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-203ENST00000551328 CLTCQ00610 1675 aaKnown RBP18.8■□□□□ 0.6
PSMC6-203ENST00000551328 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
PSMC6-203ENST00000551328 PLA2R1Q13018 1463 aa18.78■□□□□ 0.6
PSMC6-203ENST00000551328 CEP170BQ9Y4F5 1589 aaPredicted RBP18.77■□□□□ 0.6
PSMC6-203ENST00000551328 PTPRKQ15262 1439 aa18.77■□□□□ 0.6
PSMC6-203ENST00000551328 PKD2Q13563 968 aa18.77■□□□□ 0.6
PSMC6-203ENST00000551328 MED1Q15648 1581 aaPredicted RBP18.76■□□□□ 0.59
PSMC6-203ENST00000551328 SYCP2Q9BX26 1530 aa18.75■□□□□ 0.59
PSMC6-203ENST00000551328 HSPA1LP34931 641 aa18.75■□□□□ 0.59
PSMC6-203ENST00000551328 PLXNC1O60486 1568 aa18.75■□□□□ 0.59
PSMC6-203ENST00000551328 HNRNPMP52272 730 aaKnown RBP eCLIP18.74■□□□□ 0.59
PSMC6-203ENST00000551328 ZNF777Q9ULD5 760 aaPredicted RBP18.73■□□□□ 0.59
PSMC6-203ENST00000551328 SPAG9O60271 1321 aaKnown RBP18.73■□□□□ 0.59
PSMC6-203ENST00000551328 ATP7AQ04656 1500 aa18.71■□□□□ 0.59
PSMC6-203ENST00000551328 CASKIN1Q8WXD9 1431 aa18.71■□□□□ 0.59
PSMC6-203ENST00000551328 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
PSMC6-203ENST00000551328 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
PSMC6-203ENST00000551328 INO80Q9ULG1 1556 aaPredicted RBP18.7■□□□□ 0.58
PSMC6-203ENST00000551328 A2MP01023 1474 aa18.7■□□□□ 0.58
PSMC6-203ENST00000551328 PIP4K2BP78356 416 aa18.69■□□□□ 0.58
PSMC6-203ENST00000551328 GGT6Q6P531 493 aa18.69■□□□□ 0.58
PSMC6-203ENST00000551328 DNMT1P26358 1616 aaKnown RBP18.69■□□□□ 0.58
PSMC6-203ENST00000551328 NEURL4Q96JN8 1562 aa18.66■□□□□ 0.58
PSMC6-203ENST00000551328 A2ML1A8K2U0 1454 aa18.65■□□□□ 0.58
PSMC6-203ENST00000551328 ALKQ9UM73 1620 aa18.65■□□□□ 0.58
PSMC6-203ENST00000551328 KIAA1107Q9UPP5 1409 aa18.64■□□□□ 0.57
PSMC6-203ENST00000551328 POLR1AO95602 1720 aaPredicted RBP18.63■□□□□ 0.57
PSMC6-203ENST00000551328 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
PSMC6-203ENST00000551328 TOM1O60784 492 aa18.62■□□□□ 0.57
PSMC6-203ENST00000551328 CPS1P31327 1500 aa18.62■□□□□ 0.57
PSMC6-203ENST00000551328 ADGBQ8N7X0 1667 aa18.6■□□□□ 0.57
PSMC6-203ENST00000551328 FBXO31Q5XUX0 539 aaPredicted RBP18.6■□□□□ 0.57
PSMC6-203ENST00000551328 VWDEQ8N2E2 1590 aa18.59■□□□□ 0.57
PSMC6-203ENST00000551328 FYCO1Q9BQS8 1478 aa18.59■□□□□ 0.57
PSMC6-203ENST00000551328 CFDP1Q9UEE9 299 aaPredicted RBP18.59■□□□□ 0.57
PSMC6-203ENST00000551328 PLEKHH2Q8IVE3 1493 aa18.58■□□□□ 0.56
PSMC6-203ENST00000551328 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
PSMC6-203ENST00000551328 ATF5Q9Y2D1 282 aaPredicted RBP18.56■□□□□ 0.56
PSMC6-203ENST00000551328 TNRQ92752 1358 aa18.55■□□□□ 0.56
PSMC6-203ENST00000551328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
PSMC6-203ENST00000551328 MBD5Q9P267 1494 aa18.54■□□□□ 0.56
PSMC6-203ENST00000551328 CCNB3Q8WWL7 1395 aa18.54■□□□□ 0.56
PSMC6-203ENST00000551328 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
PSMC6-203ENST00000551328 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
PSMC6-203ENST00000551328 DHX29Q7Z478 1369 aaKnown RBP18.51■□□□□ 0.55
PSMC6-203ENST00000551328 PZPP20742 1482 aa18.51■□□□□ 0.55
PSMC6-203ENST00000551328 ANKLE2Q86XL3 938 aa18.5■□□□□ 0.55
PSMC6-203ENST00000551328 MED14O60244 1454 aa18.5■□□□□ 0.55
PSMC6-203ENST00000551328 TIAM1Q13009 1591 aa18.49■□□□□ 0.55
PSMC6-203ENST00000551328 DEPDC5O75140 1603 aa18.49■□□□□ 0.55
PSMC6-203ENST00000551328 RTEL1-TNFRSF6BF6WH68 1400 aa18.49■□□□□ 0.55
PSMC6-203ENST00000551328 NPHP4O75161 1426 aaPredicted RBP18.49■□□□□ 0.55
PSMC6-203ENST00000551328 KIF3BO15066 747 aa18.48■□□□□ 0.55
PSMC6-203ENST00000551328 RGS17Q9UGC6 210 aaPredicted RBP18.48■□□□□ 0.55
PSMC6-203ENST00000551328 KDM5DQ9BY66 1539 aa18.48■□□□□ 0.55
PSMC6-203ENST00000551328 MIA2Q96PC5 1412 aa18.47■□□□□ 0.55
PSMC6-203ENST00000551328 UGGT1Q9NYU2 1555 aa18.47■□□□□ 0.55
PSMC6-203ENST00000551328 LRRC7Q96NW7 1537 aa18.46■□□□□ 0.55
PSMC6-203ENST00000551328 THEMISQ8N1K5 641 aaPredicted RBP18.46■□□□□ 0.55
PSMC6-203ENST00000551328 IQGAP1P46940 1657 aa18.45■□□□□ 0.54
PSMC6-203ENST00000551328 NLRP1Q9C000 1473 aa18.44■□□□□ 0.54
PSMC6-203ENST00000551328 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
PSMC6-203ENST00000551328 SP7Q8TDD2 431 aaPredicted RBP18.43■□□□□ 0.54
PSMC6-203ENST00000551328 WASHC2CQ9Y4E1 1318 aa18.43■□□□□ 0.54
PSMC6-203ENST00000551328 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
PSMC6-203ENST00000551328 FAM135AQ9P2D6 1515 aa18.42■□□□□ 0.54
PSMC6-203ENST00000551328 RNF17Q9BXT8 1623 aaKnown RBP18.41■□□□□ 0.54
PSMC6-203ENST00000551328 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
PSMC6-203ENST00000551328 REM2Q8IYK8 340 aaPredicted RBP18.39■□□□□ 0.53
PSMC6-203ENST00000551328 SYNMO15061 1565 aa18.38■□□□□ 0.53
PSMC6-203ENST00000551328 ZC3H13Q5T200 1668 aaKnown RBP18.38■□□□□ 0.53
PSMC6-203ENST00000551328 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
PSMC6-203ENST00000551328 CCDC141Q6ZP82 1450 aa18.37■□□□□ 0.53
PSMC6-203ENST00000551328 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
PSMC6-203ENST00000551328 EHBP1L1Q8N3D4 1523 aa18.35■□□□□ 0.53
PSMC6-203ENST00000551328 CAMSAP2Q08AD1 1489 aa18.34■□□□□ 0.53
PSMC6-203ENST00000551328 CEP162Q5TB80 1403 aa18.34■□□□□ 0.53
PSMC6-203ENST00000551328 PIP4P2Q8N4L2 257 aa18.33■□□□□ 0.52
PSMC6-203ENST00000551328 POTEAQ6S8J7 498 aa18.32■□□□□ 0.52
PSMC6-203ENST00000551328 ABCC3O15438 1527 aa18.32■□□□□ 0.52
PSMC6-203ENST00000551328 UBR1Q8IWV7 1749 aa18.32■□□□□ 0.52
PSMC6-203ENST00000551328 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
PSMC6-203ENST00000551328 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
PSMC6-203ENST00000551328 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
PSMC6-203ENST00000551328 LTKP29376 864 aa18.29■□□□□ 0.52
PSMC6-203ENST00000551328 MROH1Q8NDA8 1641 aa18.27■□□□□ 0.52
PSMC6-203ENST00000551328 SCAF11Q99590 1463 aaKnown RBP18.27■□□□□ 0.52
PSMC6-203ENST00000551328 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.52
PSMC6-203ENST00000551328 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
PSMC6-203ENST00000551328 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
PSMC6-203ENST00000551328 CEP152O94986 1710 aa18.25■□□□□ 0.51
PSMC6-203ENST00000551328 FAM135BQ49AJ0 1406 aa18.24■□□□□ 0.51
PSMC6-203ENST00000551328 SLIT1O75093 1534 aa18.23■□□□□ 0.51
PSMC6-203ENST00000551328 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
PSMC6-203ENST00000551328 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
PSMC6-203ENST00000551328 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
PSMC6-203ENST00000551328 SETD1AO15047 1707 aaKnown RBP18.22■□□□□ 0.51
PSMC6-203ENST00000551328 EIF2AK4Q9P2K8 1649 aaKnown RBP18.2■□□□□ 0.5
PSMC6-203ENST00000551328 ROBO1Q9Y6N7 1651 aa18.2■□□□□ 0.5
PSMC6-203ENST00000551328 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms