RNA–Protein interactions for RNA: ENST00000551147.1

PPFIA2-222, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-222ENST00000551147 GCC2Q8IWJ2 1684 aa18.6■□□□□ 0.57
PPFIA2-222ENST00000551147 DEPDC5O75140 1603 aa18.6■□□□□ 0.57
PPFIA2-222ENST00000551147 PRDM15P57071 1507 aaPredicted RBP18.58■□□□□ 0.56
PPFIA2-222ENST00000551147 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
PPFIA2-222ENST00000551147 KIF3BO15066 747 aa18.56■□□□□ 0.56
PPFIA2-222ENST00000551147 CLTCQ00610 1675 aaKnown RBP18.56■□□□□ 0.56
PPFIA2-222ENST00000551147 PTPRMP28827 1452 aa18.55■□□□□ 0.56
PPFIA2-222ENST00000551147 NAIPQ13075 1403 aa18.55■□□□□ 0.56
PPFIA2-222ENST00000551147 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
PPFIA2-222ENST00000551147 FAM135AQ9P2D6 1515 aa18.54■□□□□ 0.56
PPFIA2-222ENST00000551147 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
PPFIA2-222ENST00000551147 HFM1A2PYH4 1435 aa18.54■□□□□ 0.56
PPFIA2-222ENST00000551147 UNC13BO14795 1591 aa18.54■□□□□ 0.56
PPFIA2-222ENST00000551147 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
PPFIA2-222ENST00000551147 CEP152O94986 1710 aa18.52■□□□□ 0.56
PPFIA2-222ENST00000551147 VWDEQ8N2E2 1590 aa18.52■□□□□ 0.56
PPFIA2-222ENST00000551147 GGT6Q6P531 493 aa18.52■□□□□ 0.56
PPFIA2-222ENST00000551147 ABCC3O15438 1527 aa18.52■□□□□ 0.56
PPFIA2-222ENST00000551147 C3P01024 1663 aa18.51■□□□□ 0.55
PPFIA2-222ENST00000551147 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
PPFIA2-222ENST00000551147 ILDR1Q86SU0 546 aaPredicted RBP18.48■□□□□ 0.55
PPFIA2-222ENST00000551147 CAMSAP1Q5T5Y3 1602 aa18.47■□□□□ 0.55
PPFIA2-222ENST00000551147 LMTK2Q8IWU2 1503 aa18.45■□□□□ 0.54
PPFIA2-222ENST00000551147 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
PPFIA2-222ENST00000551147 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
PPFIA2-222ENST00000551147 EFCAB6Q5THR3 1501 aa18.42■□□□□ 0.54
PPFIA2-222ENST00000551147 ZMYM3Q14202 1370 aa18.42■□□□□ 0.54
PPFIA2-222ENST00000551147 PZPP20742 1482 aa18.41■□□□□ 0.54
PPFIA2-222ENST00000551147 CEBPAP49715 358 aaPredicted RBP18.41■□□□□ 0.54
PPFIA2-222ENST00000551147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
PPFIA2-222ENST00000551147 ESF1Q9H501 851 aaKnown RBP18.41■□□□□ 0.54
PPFIA2-222ENST00000551147 WASHC2CQ9Y4E1 1318 aa18.41■□□□□ 0.54
PPFIA2-222ENST00000551147 TET3O43151 1660 aa18.41■□□□□ 0.54
PPFIA2-222ENST00000551147 KANK1Q14678 1352 aa18.4■□□□□ 0.54
PPFIA2-222ENST00000551147 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.54
PPFIA2-222ENST00000551147 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
PPFIA2-222ENST00000551147 SETD5Q9C0A6 1442 aa18.38■□□□□ 0.53
PPFIA2-222ENST00000551147 NPATQ14207 1427 aa18.37■□□□□ 0.53
PPFIA2-222ENST00000551147 ARHGAP31Q2M1Z3 1444 aa18.37■□□□□ 0.53
PPFIA2-222ENST00000551147 SPATA31D1Q6ZQQ2 1576 aa18.36■□□□□ 0.53
PPFIA2-222ENST00000551147 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
PPFIA2-222ENST00000551147 E9PCH4 1651 aa18.35■□□□□ 0.53
PPFIA2-222ENST00000551147 MYO3AQ8NEV4 1616 aa18.35■□□□□ 0.53
PPFIA2-222ENST00000551147 ERVK-7P63135 1459 aa18.35■□□□□ 0.53
PPFIA2-222ENST00000551147 NUP155O75694 1391 aa18.35■□□□□ 0.53
PPFIA2-222ENST00000551147 RAB3GAP2Q9H2M9 1393 aa18.34■□□□□ 0.53
PPFIA2-222ENST00000551147 FBXO31Q5XUX0 539 aaPredicted RBP18.31■□□□□ 0.52
PPFIA2-222ENST00000551147 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
PPFIA2-222ENST00000551147 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
PPFIA2-222ENST00000551147 SYNMO15061 1565 aa18.3■□□□□ 0.52
PPFIA2-222ENST00000551147 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
PPFIA2-222ENST00000551147 TNRQ92752 1358 aa18.29■□□□□ 0.52
PPFIA2-222ENST00000551147 NOS1P29475 1434 aa18.28■□□□□ 0.52
PPFIA2-222ENST00000551147 UHRF1BP1Q6BDS2 1440 aa18.27■□□□□ 0.52
PPFIA2-222ENST00000551147 CFAP65Q6ZU64 1925 aaKnown RBP18.27■□□□□ 0.51
PPFIA2-222ENST00000551147 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
PPFIA2-222ENST00000551147 SETD1BQ9UPS6 1966 aaKnown RBP18.26■□□□□ 0.51
PPFIA2-222ENST00000551147 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
PPFIA2-222ENST00000551147 SPHKAPQ2M3C7 1700 aa18.24■□□□□ 0.51
PPFIA2-222ENST00000551147 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
PPFIA2-222ENST00000551147 PIK3C2BO00750 1634 aa18.23■□□□□ 0.51
PPFIA2-222ENST00000551147 UGGT1Q9NYU2 1555 aa18.22■□□□□ 0.51
PPFIA2-222ENST00000551147 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
PPFIA2-222ENST00000551147 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
PPFIA2-222ENST00000551147 PTPRTO14522 1441 aa18.2■□□□□ 0.5
PPFIA2-222ENST00000551147 TRPM2O94759 1503 aa18.19■□□□□ 0.5
PPFIA2-222ENST00000551147 HRCP23327 699 aa18.19■□□□□ 0.5
PPFIA2-222ENST00000551147 HSPA2P54652 639 aa18.19■□□□□ 0.5
PPFIA2-222ENST00000551147 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
PPFIA2-222ENST00000551147 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
PPFIA2-222ENST00000551147 PLA2R1Q13018 1463 aa18.19■□□□□ 0.5
PPFIA2-222ENST00000551147 PKD2Q13563 968 aa18.18■□□□□ 0.5
PPFIA2-222ENST00000551147 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
PPFIA2-222ENST00000551147 ADGRB3O60242 1522 aa18.17■□□□□ 0.5
PPFIA2-222ENST00000551147 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
PPFIA2-222ENST00000551147 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
PPFIA2-222ENST00000551147 KDM5AP29375 1690 aaKnown RBP18.15■□□□□ 0.5
PPFIA2-222ENST00000551147 FOXD1Q16676 465 aa18.14■□□□□ 0.49
PPFIA2-222ENST00000551147 TMEM131LA2VDJ0 1609 aa18.13■□□□□ 0.49
PPFIA2-222ENST00000551147 MYO5BQ9ULV0 1848 aa18.12■□□□□ 0.49
PPFIA2-222ENST00000551147 IDI1Q13907 227 aa18.12■□□□□ 0.49
PPFIA2-222ENST00000551147 STRCQ7RTU9 1775 aa18.12■□□□□ 0.49
PPFIA2-222ENST00000551147 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
PPFIA2-222ENST00000551147 POLR1AO95602 1720 aaPredicted RBP18.09■□□□□ 0.49
PPFIA2-222ENST00000551147 SLIT1O75093 1534 aa18.08■□□□□ 0.49
PPFIA2-222ENST00000551147 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.49
PPFIA2-222ENST00000551147 NEURL4Q96JN8 1562 aa18.08■□□□□ 0.48
PPFIA2-222ENST00000551147 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
PPFIA2-222ENST00000551147 KIF1BO60333 1816 aa18.05■□□□□ 0.48
PPFIA2-222ENST00000551147 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
PPFIA2-222ENST00000551147 CCDC144AA2RUR9 1427 aa18.03■□□□□ 0.48
PPFIA2-222ENST00000551147 ZFYVE9O95405 1425 aa18.03■□□□□ 0.48
PPFIA2-222ENST00000551147 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
PPFIA2-222ENST00000551147 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
PPFIA2-222ENST00000551147 THEMISQ8N1K5 641 aaPredicted RBP18.02■□□□□ 0.48
PPFIA2-222ENST00000551147 CERKQ8TCT0 537 aa18.01■□□□□ 0.47
PPFIA2-222ENST00000551147 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
PPFIA2-222ENST00000551147 NCKAP5LQ9HCH0 1330 aa17.99■□□□□ 0.47
PPFIA2-222ENST00000551147 SPATA31E1Q6ZUB1 1445 aa17.99■□□□□ 0.47
PPFIA2-222ENST00000551147 NEXMIFQ5QGS0 1516 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms