RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 IQGAP1P46940 1657 aa19.06■□□□□ 0.64
GPN3-208ENST00000550974 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
GPN3-208ENST00000550974 FAM135BQ49AJ0 1406 aa19.06■□□□□ 0.64
GPN3-208ENST00000550974 FMN1Q68DA7 1419 aa19.04■□□□□ 0.64
GPN3-208ENST00000550974 ATP7AQ04656 1500 aa19.04■□□□□ 0.64
GPN3-208ENST00000550974 FAM135AQ9P2D6 1515 aa19.04■□□□□ 0.64
GPN3-208ENST00000550974 UGGT1Q9NYU2 1555 aa19.03■□□□□ 0.64
GPN3-208ENST00000550974 SYCP2Q9BX26 1530 aa19.01■□□□□ 0.63
GPN3-208ENST00000550974 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
GPN3-208ENST00000550974 PZPP20742 1482 aa18.97■□□□□ 0.63
GPN3-208ENST00000550974 NLRP1Q9C000 1473 aa18.97■□□□□ 0.63
GPN3-208ENST00000550974 ZNF772Q68DY9 489 aaPredicted RBP18.96■□□□□ 0.63
GPN3-208ENST00000550974 INO80Q9ULG1 1556 aaPredicted RBP18.96■□□□□ 0.63
GPN3-208ENST00000550974 CDC42BPAQ5VT25 1732 aa18.95■□□□□ 0.62
GPN3-208ENST00000550974 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
GPN3-208ENST00000550974 ROBO1Q9Y6N7 1651 aa18.94■□□□□ 0.62
GPN3-208ENST00000550974 SRCAPQ6ZRS2 3230 aa18.93■□□□□ 0.62
GPN3-208ENST00000550974 JCADQ9P266 1359 aa18.93■□□□□ 0.62
GPN3-208ENST00000550974 RXRBP28702 533 aa18.92■□□□□ 0.62
GPN3-208ENST00000550974 XIRP1Q702N8 1843 aaKnown RBP18.92■□□□□ 0.62
GPN3-208ENST00000550974 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
GPN3-208ENST00000550974 LRRIQ1Q96JM4 1722 aa18.91■□□□□ 0.62
GPN3-208ENST00000550974 KIF3BO15066 747 aa18.9■□□□□ 0.62
GPN3-208ENST00000550974 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
GPN3-208ENST00000550974 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
GPN3-208ENST00000550974 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.61
GPN3-208ENST00000550974 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
GPN3-208ENST00000550974 KIAA1107Q9UPP5 1409 aa18.88■□□□□ 0.61
GPN3-208ENST00000550974 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
GPN3-208ENST00000550974 RBM33Q96EV2 1170 aaKnown RBP18.87■□□□□ 0.61
GPN3-208ENST00000550974 ARHGAP35Q9NRY4 1499 aa18.86■□□□□ 0.61
GPN3-208ENST00000550974 LRP6O75581 1613 aa18.85■□□□□ 0.61
GPN3-208ENST00000550974 GPATCH8Q9UKJ3 1502 aaKnown RBP18.85■□□□□ 0.61
GPN3-208ENST00000550974 DHX29Q7Z478 1369 aaKnown RBP18.85■□□□□ 0.61
GPN3-208ENST00000550974 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
GPN3-208ENST00000550974 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
GPN3-208ENST00000550974 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
GPN3-208ENST00000550974 PHLPP1O60346 1717 aa18.84■□□□□ 0.61
GPN3-208ENST00000550974 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
GPN3-208ENST00000550974 TXNDC2Q86VQ3 553 aa18.83■□□□□ 0.6
GPN3-208ENST00000550974 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
GPN3-208ENST00000550974 LTKP29376 864 aa18.82■□□□□ 0.6
GPN3-208ENST00000550974 ZRANB1Q9UGI0 708 aa18.82■□□□□ 0.6
GPN3-208ENST00000550974 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
GPN3-208ENST00000550974 CDK12Q9NYV4 1490 aaPredicted RBP18.8■□□□□ 0.6
GPN3-208ENST00000550974 UBTFP17480 764 aaKnown RBP18.8■□□□□ 0.6
GPN3-208ENST00000550974 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
GPN3-208ENST00000550974 EEA1Q15075 1411 aa18.8■□□□□ 0.6
GPN3-208ENST00000550974 CCDC18Q5T9S5 1454 aa18.79■□□□□ 0.6
GPN3-208ENST00000550974 SLAIN2Q9P270 581 aa18.78■□□□□ 0.6
GPN3-208ENST00000550974 NUTM2BA6NNL0 878 aaPredicted RBP18.77■□□□□ 0.6
GPN3-208ENST00000550974 NUTM2EB1AL46 878 aaPredicted RBP18.77■□□□□ 0.6
GPN3-208ENST00000550974 FOXD1Q16676 465 aa18.77■□□□□ 0.6
GPN3-208ENST00000550974 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
GPN3-208ENST00000550974 NUTM2AQ8IVF1 878 aaPredicted RBP18.77■□□□□ 0.6
GPN3-208ENST00000550974 MAP3K1Q13233 1512 aa18.77■□□□□ 0.6
GPN3-208ENST00000550974 KCNA6P17658 529 aa18.75■□□□□ 0.59
GPN3-208ENST00000550974 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
GPN3-208ENST00000550974 SETBP1Q9Y6X0 1596 aa18.75■□□□□ 0.59
GPN3-208ENST00000550974 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
GPN3-208ENST00000550974 RTEL1-TNFRSF6BF6WH68 1400 aa18.74■□□□□ 0.59
GPN3-208ENST00000550974 MSH6P52701 1360 aa18.73■□□□□ 0.59
GPN3-208ENST00000550974 COL16A1Q07092 1604 aaPredicted RBP18.73■□□□□ 0.59
GPN3-208ENST00000550974 CCNB3Q8WWL7 1395 aa18.72■□□□□ 0.59
GPN3-208ENST00000550974 RGS12O14924 1447 aa18.72■□□□□ 0.59
GPN3-208ENST00000550974 FGD6Q6ZV73 1430 aa18.72■□□□□ 0.59
GPN3-208ENST00000550974 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
GPN3-208ENST00000550974 AFF2P51816 1311 aa18.71■□□□□ 0.59
GPN3-208ENST00000550974 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
GPN3-208ENST00000550974 ARHGAP23Q9P227 1491 aa18.71■□□□□ 0.59
GPN3-208ENST00000550974 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
GPN3-208ENST00000550974 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
GPN3-208ENST00000550974 MBD5Q9P267 1494 aa18.69■□□□□ 0.58
GPN3-208ENST00000550974 SLIT1O75093 1534 aa18.69■□□□□ 0.58
GPN3-208ENST00000550974 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
GPN3-208ENST00000550974 PRDM15P57071 1507 aaPredicted RBP18.68■□□□□ 0.58
GPN3-208ENST00000550974 RBM6P78332 1123 aaKnown RBP18.66■□□□□ 0.58
GPN3-208ENST00000550974 QTRT2Q9H974 415 aaKnown RBP18.65■□□□□ 0.58
GPN3-208ENST00000550974 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
GPN3-208ENST00000550974 TIAM1Q13009 1591 aa18.64■□□□□ 0.57
GPN3-208ENST00000550974 ABCC3O15438 1527 aa18.63■□□□□ 0.57
GPN3-208ENST00000550974 SHPRHQ149N8 1683 aa18.62■□□□□ 0.57
GPN3-208ENST00000550974 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
GPN3-208ENST00000550974 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
GPN3-208ENST00000550974 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
GPN3-208ENST00000550974 C8orf37Q96NL8 207 aa18.59■□□□□ 0.57
GPN3-208ENST00000550974 BCANQ96GW7 911 aa18.57■□□□□ 0.56
GPN3-208ENST00000550974 NGLY1Q96IV0 654 aa18.56■□□□□ 0.56
GPN3-208ENST00000550974 AHDC1Q5TGY3 1603 aaPredicted RBP18.56■□□□□ 0.56
GPN3-208ENST00000550974 CCDC141Q6ZP82 1450 aa18.55■□□□□ 0.56
GPN3-208ENST00000550974 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
GPN3-208ENST00000550974 NWD1Q149M9 1564 aa18.55■□□□□ 0.56
GPN3-208ENST00000550974 FYCO1Q9BQS8 1478 aa18.54■□□□□ 0.56
GPN3-208ENST00000550974 CFAP65Q6ZU64 1925 aaKnown RBP18.54■□□□□ 0.56
GPN3-208ENST00000550974 TET3O43151 1660 aa18.54■□□□□ 0.56
GPN3-208ENST00000550974 KDM5AP29375 1690 aaKnown RBP18.54■□□□□ 0.56
GPN3-208ENST00000550974 MTUS2Q5JR59 1369 aa18.53■□□□□ 0.56
GPN3-208ENST00000550974 DIP2AQ14689 1571 aa18.51■□□□□ 0.55
GPN3-208ENST00000550974 PIK3C2BO00750 1634 aa18.5■□□□□ 0.55
GPN3-208ENST00000550974 RSPH4AQ5TD94 716 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms