RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
ERBB3-215ENST00000550828 ANKRD50Q9ULJ7 1429 aa20.39■□□□□ 0.85
ERBB3-215ENST00000550828 UNC13BO14795 1591 aa20.37■□□□□ 0.85
ERBB3-215ENST00000550828 SETD5Q9C0A6 1442 aa20.34■□□□□ 0.85
ERBB3-215ENST00000550828 MADDQ8WXG6 1647 aa20.34■□□□□ 0.85
ERBB3-215ENST00000550828 CEP152O94986 1710 aa20.33■□□□□ 0.84
ERBB3-215ENST00000550828 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
ERBB3-215ENST00000550828 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
ERBB3-215ENST00000550828 RAB3GAP2Q9H2M9 1393 aa20.31■□□□□ 0.84
ERBB3-215ENST00000550828 LMTK3Q96Q04 1460 aa20.3■□□□□ 0.84
ERBB3-215ENST00000550828 VWDEQ8N2E2 1590 aa20.3■□□□□ 0.84
ERBB3-215ENST00000550828 KIF3BO15066 747 aa20.3■□□□□ 0.84
ERBB3-215ENST00000550828 FER1L4A9Z1Z3 1794 aa20.3■□□□□ 0.84
ERBB3-215ENST00000550828 IQGAP3Q86VI3 1631 aa20.27■□□□□ 0.84
ERBB3-215ENST00000550828 CLTCQ00610 1675 aaKnown RBP20.27■□□□□ 0.84
ERBB3-215ENST00000550828 RIMS1Q86UR5 1692 aaKnown RBP20.27■□□□□ 0.84
ERBB3-215ENST00000550828 KDM5DQ9BY66 1539 aa20.27■□□□□ 0.83
ERBB3-215ENST00000550828 ABCC3O15438 1527 aa20.25■□□□□ 0.83
ERBB3-215ENST00000550828 ZC3H13Q5T200 1668 aaKnown RBP20.25■□□□□ 0.83
ERBB3-215ENST00000550828 ARID4BQ4LE39 1312 aaPredicted RBP20.25■□□□□ 0.83
ERBB3-215ENST00000550828 MLECQ14165 292 aa20.23■□□□□ 0.83
ERBB3-215ENST00000550828 PZPP20742 1482 aa20.23■□□□□ 0.83
ERBB3-215ENST00000550828 GGT6Q6P531 493 aa20.22■□□□□ 0.83
ERBB3-215ENST00000550828 CAMSAP1Q5T5Y3 1602 aa20.22■□□□□ 0.83
ERBB3-215ENST00000550828 MROH2AA6NES4 1674 aa20.21■□□□□ 0.83
ERBB3-215ENST00000550828 TET3O43151 1660 aa20.21■□□□□ 0.83
ERBB3-215ENST00000550828 FAM135AQ9P2D6 1515 aa20.21■□□□□ 0.83
ERBB3-215ENST00000550828 CFAP65Q6ZU64 1925 aaKnown RBP20.2■□□□□ 0.82
ERBB3-215ENST00000550828 LMTK2Q8IWU2 1503 aa20.19■□□□□ 0.82
ERBB3-215ENST00000550828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.824e-12■□□□□ 9.4
ERBB3-215ENST00000550828 E9PCH4 1651 aa20.18■□□□□ 0.82
ERBB3-215ENST00000550828 C3P01024 1663 aa20.18■□□□□ 0.82
ERBB3-215ENST00000550828 NUP155O75694 1391 aa20.17■□□□□ 0.82
ERBB3-215ENST00000550828 EFCAB6Q5THR3 1501 aa20.17■□□□□ 0.82
ERBB3-215ENST00000550828 HRCP23327 699 aa20.15■□□□□ 0.82
ERBB3-215ENST00000550828 KANK1Q14678 1352 aa20.12■□□□□ 0.81
ERBB3-215ENST00000550828 TRIM52Q96A61 297 aa20.12■□□□□ 0.81
ERBB3-215ENST00000550828 PPP6R1Q9UPN7 881 aa20.11■□□□□ 0.81
ERBB3-215ENST00000550828 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
ERBB3-215ENST00000550828 PREX1Q8TCU6 1659 aa20.1■□□□□ 0.81
ERBB3-215ENST00000550828 WASHC2CQ9Y4E1 1318 aa20.1■□□□□ 0.81
ERBB3-215ENST00000550828 NPATQ14207 1427 aa20.1■□□□□ 0.81
ERBB3-215ENST00000550828 CERKQ8TCT0 537 aa20.08■□□□□ 0.81
ERBB3-215ENST00000550828 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
ERBB3-215ENST00000550828 HSPA2P54652 639 aa20.07■□□□□ 0.8
ERBB3-215ENST00000550828 ARHGAP31Q2M1Z3 1444 aa20.07■□□□□ 0.8
ERBB3-215ENST00000550828 ZMYM3Q14202 1370 aa20.06■□□□□ 0.8
ERBB3-215ENST00000550828 MPHOSPH9Q99550 1183 aa20.05■□□□□ 0.8
ERBB3-215ENST00000550828 DHX57Q6P158 1386 aaKnown RBP20.05■□□□□ 0.8
ERBB3-215ENST00000550828 SYNMO15061 1565 aa20.04■□□□□ 0.8
ERBB3-215ENST00000550828 SLC4A1APQ9BWU0 796 aaKnown RBP20.03■□□□□ 0.8
ERBB3-215ENST00000550828 ERVK-7P63135 1459 aa20.03■□□□□ 0.8
ERBB3-215ENST00000550828 RPRD2Q5VT52 1461 aaKnown RBP20.03■□□□□ 0.8
ERBB3-215ENST00000550828 SPATA31D1Q6ZQQ2 1576 aa20.03■□□□□ 0.8
ERBB3-215ENST00000550828 CEBPAP49715 358 aaPredicted RBP20.02■□□□□ 0.8
ERBB3-215ENST00000550828 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.79
ERBB3-215ENST00000550828 PLA2R1Q13018 1463 aa20.01■□□□□ 0.79
ERBB3-215ENST00000550828 PKD2Q13563 968 aa20.01■□□□□ 0.79
ERBB3-215ENST00000550828 FOXD1Q16676 465 aa20.01■□□□□ 0.79
ERBB3-215ENST00000550828 NOS1P29475 1434 aa20■□□□□ 0.79
ERBB3-215ENST00000550828 FBXO31Q5XUX0 539 aaPredicted RBP19.99■□□□□ 0.79
ERBB3-215ENST00000550828 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
ERBB3-215ENST00000550828 ESF1Q9H501 851 aaKnown RBP19.99■□□□□ 0.79
ERBB3-215ENST00000550828 UGGT1Q9NYU2 1555 aa19.99■□□□□ 0.79
ERBB3-215ENST00000550828 PIK3C2BO00750 1634 aa19.98■□□□□ 0.79
ERBB3-215ENST00000550828 PTPRTO14522 1441 aa19.98■□□□□ 0.79
ERBB3-215ENST00000550828 CLTCL1P53675 1640 aa19.98■□□□□ 0.79
ERBB3-215ENST00000550828 TRPM2O94759 1503 aa19.97■□□□□ 0.79
ERBB3-215ENST00000550828 SETD1BQ9UPS6 1966 aaKnown RBP19.97■□□□□ 0.79
ERBB3-215ENST00000550828 MYO5BQ9ULV0 1848 aa19.96■□□□□ 0.79
ERBB3-215ENST00000550828 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
ERBB3-215ENST00000550828 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
ERBB3-215ENST00000550828 ANKRD30BQ9BXX2 1392 aa19.93■□□□□ 0.78
ERBB3-215ENST00000550828 STRCQ7RTU9 1775 aa19.92■□□□□ 0.78
ERBB3-215ENST00000550828 DISP3Q9P2K9 1392 aa19.92■□□□□ 0.78
ERBB3-215ENST00000550828 ZNF142P52746 1687 aaPredicted RBP19.91■□□□□ 0.78
ERBB3-215ENST00000550828 TNRQ92752 1358 aa19.91■□□□□ 0.78
ERBB3-215ENST00000550828 KIF1BO60333 1816 aa19.89■□□□□ 0.77
ERBB3-215ENST00000550828 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
ERBB3-215ENST00000550828 UHRF1BP1Q6BDS2 1440 aa19.88■□□□□ 0.77
ERBB3-215ENST00000550828 SOCS7O14512 581 aa19.88■□□□□ 0.77
ERBB3-215ENST00000550828 TMEM131LA2VDJ0 1609 aa19.87■□□□□ 0.77
ERBB3-215ENST00000550828 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
ERBB3-215ENST00000550828 KDM5AP29375 1690 aaKnown RBP19.84■□□□□ 0.77
ERBB3-215ENST00000550828 ADGRB3O60242 1522 aa19.84■□□□□ 0.77
ERBB3-215ENST00000550828 NLRP1Q9C000 1473 aa19.84■□□□□ 0.77
ERBB3-215ENST00000550828 IDI1Q13907 227 aa19.82■□□□□ 0.76
ERBB3-215ENST00000550828 A2ML1A8K2U0 1454 aa19.81■□□□□ 0.76
ERBB3-215ENST00000550828 ILDR2Q71H61 639 aa19.81■□□□□ 0.76
ERBB3-215ENST00000550828 CCDC144AA2RUR9 1427 aa19.81■□□□□ 0.76
ERBB3-215ENST00000550828 IQSEC2Q5JU85 1478 aa19.8■□□□□ 0.76
ERBB3-215ENST00000550828 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
ERBB3-215ENST00000550828 SPATA31E1Q6ZUB1 1445 aa19.79■□□□□ 0.76
ERBB3-215ENST00000550828 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
ERBB3-215ENST00000550828 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
ERBB3-215ENST00000550828 NEURL4Q96JN8 1562 aa19.78■□□□□ 0.76
ERBB3-215ENST00000550828 PPLO60437 1756 aa19.76■□□□□ 0.75
ERBB3-215ENST00000550828 CCER1Q8TC90 406 aaPredicted RBP19.76■□□□□ 0.75
ERBB3-215ENST00000550828 NEXMIFQ5QGS0 1516 aa19.73■□□□□ 0.75
ERBB3-215ENST00000550828 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms