RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
NPAS3-208ENST00000550662 EVI5O60447 810 aa13.17□□□□□ -0.3
NPAS3-208ENST00000550662 OSBPP22059 807 aa13.17□□□□□ -0.3
NPAS3-208ENST00000550662 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
NPAS3-208ENST00000550662 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
NPAS3-208ENST00000550662 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
NPAS3-208ENST00000550662 DDX12PQ92771 950 aa13.14□□□□□ -0.31
NPAS3-208ENST00000550662 TRIM66O15016 1216 aa13.13□□□□□ -0.31
NPAS3-208ENST00000550662 FCHSD2O94868 740 aa13.12□□□□□ -0.31
NPAS3-208ENST00000550662 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
NPAS3-208ENST00000550662 RNF166Q96A37 237 aaPredicted RBP13.12□□□□□ -0.31
NPAS3-208ENST00000550662 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
NPAS3-208ENST00000550662 HIC1Q14526 733 aa13.11□□□□□ -0.31
NPAS3-208ENST00000550662 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
NPAS3-208ENST00000550662 GNPATO15228 680 aa13.1□□□□□ -0.31
NPAS3-208ENST00000550662 LSM11P83369 360 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPAS3-208ENST00000550662 MAP2K5Q13163 448 aa13.1□□□□□ -0.31
NPAS3-208ENST00000550662 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
NPAS3-208ENST00000550662 PDE4DQ08499 809 aa13.09□□□□□ -0.31
NPAS3-208ENST00000550662 PBX2P40425 430 aa13.08□□□□□ -0.32
NPAS3-208ENST00000550662 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
NPAS3-208ENST00000550662 EPAS1Q99814 870 aa13.07□□□□□ -0.32
NPAS3-208ENST00000550662 IRF6O14896 467 aa13.05□□□□□ -0.32
NPAS3-208ENST00000550662 KDM4CQ9H3R0 1056 aa13.05□□□□□ -0.32
NPAS3-208ENST00000550662 GPBP1L1Q9HC44 474 aaPredicted RBP13.05□□□□□ -0.32
NPAS3-208ENST00000550662 PHF14O94880 888 aa13.04□□□□□ -0.32
NPAS3-208ENST00000550662 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
NPAS3-208ENST00000550662 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
NPAS3-208ENST00000550662 PTGDRQ13258 359 aa13.01□□□□□ -0.33
NPAS3-208ENST00000550662 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
NPAS3-208ENST00000550662 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
NPAS3-208ENST00000550662 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
NPAS3-208ENST00000550662 AMHR2Q16671 573 aa12.99□□□□□ -0.33
NPAS3-208ENST00000550662 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.33
NPAS3-208ENST00000550662 C14orf37Q86TY3 774 aa12.96□□□□□ -0.33
NPAS3-208ENST00000550662 FBXW7Q969H0 707 aa12.96□□□□□ -0.33
NPAS3-208ENST00000550662 MAP3K7O43318 606 aa12.95□□□□□ -0.34
NPAS3-208ENST00000550662 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
NPAS3-208ENST00000550662 FECHP22830 423 aa12.94□□□□□ -0.34
NPAS3-208ENST00000550662 PCDHGA10Q9Y5H3 936 aa12.94□□□□□ -0.34
NPAS3-208ENST00000550662 JPH4Q96JJ6 628 aa12.93□□□□□ -0.34
NPAS3-208ENST00000550662 PSEN2P49810 448 aa12.92□□□□□ -0.34
NPAS3-208ENST00000550662 DMRTA1Q5VZB9 504 aa12.92□□□□□ -0.34
NPAS3-208ENST00000550662 ADGRD1Q6QNK2 874 aa12.92□□□□□ -0.34
NPAS3-208ENST00000550662 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
NPAS3-208ENST00000550662 PPP4R3BQ5MIZ7 849 aa12.91□□□□□ -0.34
NPAS3-208ENST00000550662 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
NPAS3-208ENST00000550662 NPDC1Q9NQX5 325 aaPredicted RBP12.9□□□□□ -0.34
NPAS3-208ENST00000550662 RBM33Q96EV2 1170 aaKnown RBP12.89□□□□□ -0.35
NPAS3-208ENST00000550662 CDHR5Q9HBB8 845 aa12.89□□□□□ -0.35
NPAS3-208ENST00000550662 TK2O00142 265 aa12.87□□□□□ -0.35
NPAS3-208ENST00000550662 FOSBP53539 338 aa12.87□□□□□ -0.35
NPAS3-208ENST00000550662 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
NPAS3-208ENST00000550662 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
NPAS3-208ENST00000550662 FAM117AQ9C073 453 aa12.87□□□□□ -0.35
NPAS3-208ENST00000550662 HRO43593 1189 aa12.86□□□□□ -0.35
NPAS3-208ENST00000550662 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
NPAS3-208ENST00000550662 ZDHHC16Q969W1 377 aa12.83□□□□□ -0.36
NPAS3-208ENST00000550662 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
NPAS3-208ENST00000550662 KCNK17Q96T54 332 aa12.81□□□□□ -0.36
NPAS3-208ENST00000550662 PLEKHG3A1L390 1219 aa12.8□□□□□ -0.36
NPAS3-208ENST00000550662 CLCN1P35523 988 aa12.8□□□□□ -0.36
NPAS3-208ENST00000550662 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
NPAS3-208ENST00000550662 RBM27Q9P2N5 1060 aaKnown RBP12.8□□□□□ -0.36
NPAS3-208ENST00000550662 OATP04181 439 aa12.79□□□□□ -0.36
NPAS3-208ENST00000550662 GIGYF2Q6Y7W6 1299 aaKnown RBP12.79□□□□□ -0.36
NPAS3-208ENST00000550662 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
NPAS3-208ENST00000550662 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
NPAS3-208ENST00000550662 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
NPAS3-208ENST00000550662 VPS9D1Q9Y2B5 631 aa12.76□□□□□ -0.37
NPAS3-208ENST00000550662 TMUB1Q9BVT8 246 aa12.75□□□□□ -0.37
NPAS3-208ENST00000550662 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
NPAS3-208ENST00000550662 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
NPAS3-208ENST00000550662 PADI6Q6TGC4 694 aa12.73□□□□□ -0.37
NPAS3-208ENST00000550662 MS4A1P11836 297 aa12.72□□□□□ -0.37
NPAS3-208ENST00000550662 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
NPAS3-208ENST00000550662 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
NPAS3-208ENST00000550662 TTC13Q8NBP0 860 aa12.72□□□□□ -0.37
NPAS3-208ENST00000550662 REPIN1Q9BWE0 567 aaKnown RBP12.72□□□□□ -0.37
NPAS3-208ENST00000550662 SLC4A5Q9BY07 1137 aa12.72□□□□□ -0.37
NPAS3-208ENST00000550662 ADAM33Q9BZ11 813 aa12.72□□□□□ -0.37
NPAS3-208ENST00000550662 ADGRG1Q9Y653 693 aa12.71□□□□□ -0.37
NPAS3-208ENST00000550662 PTPREP23469 700 aa12.7□□□□□ -0.38
NPAS3-208ENST00000550662 PRSS12P56730 875 aa12.7□□□□□ -0.38
NPAS3-208ENST00000550662 PHOX2BQ99453 314 aa12.69□□□□□ -0.38
NPAS3-208ENST00000550662 BHMG1C9JSJ3 638 aaPredicted RBP12.68□□□□□ -0.38
NPAS3-208ENST00000550662 PXYLP1Q8TE99 480 aa12.68□□□□□ -0.38
NPAS3-208ENST00000550662 KCTD12Q96CX2 325 aaKnown RBP12.68□□□□□ -0.38
NPAS3-208ENST00000550662 SSTR3P32745 418 aaPredicted RBP12.67□□□□□ -0.38
NPAS3-208ENST00000550662 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
NPAS3-208ENST00000550662 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
NPAS3-208ENST00000550662 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
NPAS3-208ENST00000550662 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
NPAS3-208ENST00000550662 PCMTD1Q96MG8 357 aaPredicted RBP12.66□□□□□ -0.38
NPAS3-208ENST00000550662 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
NPAS3-208ENST00000550662 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
NPAS3-208ENST00000550662 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
NPAS3-208ENST00000550662 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
NPAS3-208ENST00000550662 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
NPAS3-208ENST00000550662 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms