RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
PTPRR-210ENST00000550661 ILDR1Q86SU0 546 aaPredicted RBP9.47□□□□□ -0.89
PTPRR-210ENST00000550661 P3H3Q8IVL6 736 aa9.47□□□□□ -0.89
PTPRR-210ENST00000550661 CASKIN1Q8WXD9 1431 aa9.47□□□□□ -0.89
PTPRR-210ENST00000550661 POTEJP0CG39 1038 aa9.46□□□□□ -0.9
PTPRR-210ENST00000550661 NUP153P49790 1475 aaKnown RBP9.46□□□□□ -0.9
PTPRR-210ENST00000550661 KDM5BQ9UGL1 1544 aa9.46□□□□□ -0.9
PTPRR-210ENST00000550661 CYB5RLQ6IPT4 315 aa9.45□□□□□ -0.9
PTPRR-210ENST00000550661 DPY19L2Q6NUT2 758 aa9.45□□□□□ -0.9
PTPRR-210ENST00000550661 NLRP6P59044 892 aa9.44□□□□□ -0.9
PTPRR-210ENST00000550661 MFRPQ9BY79 579 aa9.44□□□□□ -0.9
PTPRR-210ENST00000550661 CCDC18Q5T9S5 1454 aa9.44□□□□□ -0.9
PTPRR-210ENST00000550661 MAPKBP1O60336 1514 aa9.44□□□□□ -0.9
PTPRR-210ENST00000550661 TTBK1Q5TCY1 1321 aaPredicted RBP9.43□□□□□ -0.9
PTPRR-210ENST00000550661 MAMSTRQ6ZN01 415 aa9.43□□□□□ -0.9
PTPRR-210ENST00000550661 ZCCHC11Q5TAX3 1644 aaKnown RBP9.42□□□□□ -0.9
PTPRR-210ENST00000550661 L3MBTL3Q96JM7 780 aaPredicted RBP9.42□□□□□ -0.9
PTPRR-210ENST00000550661 SCUBE2Q9NQ36 999 aa9.42□□□□□ -0.9
PTPRR-210ENST00000550661 EPRSP07814 1512 aaKnown RBP9.41□□□□□ -0.9
PTPRR-210ENST00000550661 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
PTPRR-210ENST00000550661 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
PTPRR-210ENST00000550661 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
PTPRR-210ENST00000550661 G3V3G9 751 aa9.4□□□□□ -0.9
PTPRR-210ENST00000550661 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
PTPRR-210ENST00000550661 CDK13Q14004 1512 aaKnown RBP9.39□□□□□ -0.91
PTPRR-210ENST00000550661 ATP10BO94823 1461 aa9.39□□□□□ -0.91
PTPRR-210ENST00000550661 WDR7Q9Y4E6 1490 aa9.39□□□□□ -0.91
PTPRR-210ENST00000550661 MAP3K1Q13233 1512 aa9.38□□□□□ -0.91
PTPRR-210ENST00000550661 NKX1-1Q15270 411 aaPredicted RBP9.38□□□□□ -0.91
PTPRR-210ENST00000550661 BOLA1Q9Y3E2 137 aa9.38□□□□□ -0.91
PTPRR-210ENST00000550661 LRRIQ1Q96JM4 1722 aa9.37□□□□□ -0.91
PTPRR-210ENST00000550661 ASXL2Q76L83 1435 aa9.37□□□□□ -0.91
PTPRR-210ENST00000550661 TIAM1Q13009 1591 aa9.37□□□□□ -0.91
PTPRR-210ENST00000550661 C3orf67Q6ZVT6 689 aa9.36□□□□□ -0.91
PTPRR-210ENST00000550661 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
PTPRR-210ENST00000550661 DIP2BQ9P265 1576 aa9.34□□□□□ -0.91
PTPRR-210ENST00000550661 TROQ12816 1431 aaPredicted RBP9.34□□□□□ -0.91
PTPRR-210ENST00000550661 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.34□□□□□ -0.91
PTPRR-210ENST00000550661 KIF14Q15058 1648 aa9.34□□□□□ -0.91
PTPRR-210ENST00000550661 ABCC10Q5T3U5 1492 aa9.34□□□□□ -0.91
PTPRR-210ENST00000550661 MICALL2Q8IY33 904 aa9.33□□□□□ -0.92
PTPRR-210ENST00000550661 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
PTPRR-210ENST00000550661 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
PTPRR-210ENST00000550661 GLI2P10070 1586 aa9.33□□□□□ -0.92
PTPRR-210ENST00000550661 MAGI3Q5TCQ9 1506 aa9.32□□□□□ -0.92
PTPRR-210ENST00000550661 ARID3CA6NKF2 412 aa9.32□□□□□ -0.92
PTPRR-210ENST00000550661 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-210ENST00000550661 RYDENQ9NUL5 291 aaKnown RBP9.32□□□□□ -0.92
PTPRR-210ENST00000550661 PPP1R37O75864 691 aa9.31□□□□□ -0.92
PTPRR-210ENST00000550661 SLAIN1Q8ND83 568 aa9.31□□□□□ -0.92
PTPRR-210ENST00000550661 TMEM121BQ9BXQ6 578 aaPredicted RBP9.31□□□□□ -0.92
PTPRR-210ENST00000550661 LRRC9Q6ZRR7 1453 aa9.31□□□□□ -0.92
PTPRR-210ENST00000550661 MTUS2Q5JR59 1369 aa9.3□□□□□ -0.92
PTPRR-210ENST00000550661 PLEKHD1A6NEE1 506 aa9.3□□□□□ -0.92
PTPRR-210ENST00000550661 ABCA9Q8IUA7 1624 aa9.3□□□□□ -0.92
PTPRR-210ENST00000550661 TTC37Q6PGP7 1564 aa9.29□□□□□ -0.92
PTPRR-210ENST00000550661 MAP3K4Q9Y6R4 1608 aa9.28□□□□□ -0.92
PTPRR-210ENST00000550661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPRR-210ENST00000550661 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
PTPRR-210ENST00000550661 SUPT6HQ7KZ85 1726 aaKnown RBP9.28□□□□□ -0.92
PTPRR-210ENST00000550661 ARAP3Q8WWN8 1544 aa9.27□□□□□ -0.93
PTPRR-210ENST00000550661 KIF13AQ9H1H9 1805 aa9.26□□□□□ -0.93
PTPRR-210ENST00000550661 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.26□□□□□ -0.93
PTPRR-210ENST00000550661 NCOA2Q15596 1464 aa9.25□□□□□ -0.93
PTPRR-210ENST00000550661 PREX2Q70Z35 1606 aa9.24□□□□□ -0.93
PTPRR-210ENST00000550661 ITSN2Q9NZM3 1697 aa9.24□□□□□ -0.93
PTPRR-210ENST00000550661 TEX14Q8IWB6 1497 aa9.24□□□□□ -0.93
PTPRR-210ENST00000550661 FAM69CQ0P6D2 419 aa9.24□□□□□ -0.93
PTPRR-210ENST00000550661 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
PTPRR-210ENST00000550661 CD109Q6YHK3 1445 aa9.23□□□□□ -0.93
PTPRR-210ENST00000550661 MYO5CQ9NQX4 1742 aa9.23□□□□□ -0.93
PTPRR-210ENST00000550661 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
PTPRR-210ENST00000550661 KCNH8Q96L42 1107 aa9.22□□□□□ -0.93
PTPRR-210ENST00000550661 PLSCR2Q9NRY7 297 aa9.22□□□□□ -0.93
PTPRR-210ENST00000550661 CCNB3Q8WWL7 1395 aa9.22□□□□□ -0.93
PTPRR-210ENST00000550661 PLCH2O75038 1416 aa9.22□□□□□ -0.93
PTPRR-210ENST00000550661 NEO1Q92859 1461 aa9.21□□□□□ -0.93
PTPRR-210ENST00000550661 GPATCH8Q9UKJ3 1502 aaKnown RBP9.21□□□□□ -0.93
PTPRR-210ENST00000550661 PPRC1Q5VV67 1664 aaKnown RBP9.21□□□□□ -0.93
PTPRR-210ENST00000550661 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
PTPRR-210ENST00000550661 MYOM3Q5VTT5 1437 aa9.21□□□□□ -0.94
PTPRR-210ENST00000550661 ARHGAP5Q13017 1502 aa9.21□□□□□ -0.94
PTPRR-210ENST00000550661 CDC42BPAQ5VT25 1732 aa9.2□□□□□ -0.94
PTPRR-210ENST00000550661 TMEM92Q6UXU6 159 aa9.2□□□□□ -0.94
PTPRR-210ENST00000550661 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
PTPRR-210ENST00000550661 FANCAO15360 1455 aa9.2□□□□□ -0.94
PTPRR-210ENST00000550661 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
PTPRR-210ENST00000550661 PHLDB1Q86UU1 1377 aa9.19□□□□□ -0.94
PTPRR-210ENST00000550661 MIA2Q96PC5 1412 aa9.19□□□□□ -0.94
PTPRR-210ENST00000550661 ABCC1P33527 1531 aa9.18□□□□□ -0.94
PTPRR-210ENST00000550661 CDC42BPBQ9Y5S2 1711 aa9.17□□□□□ -0.94
PTPRR-210ENST00000550661 PLEKHH2Q8IVE3 1493 aa9.17□□□□□ -0.94
PTPRR-210ENST00000550661 FGD6Q6ZV73 1430 aa9.17□□□□□ -0.94
PTPRR-210ENST00000550661 SAMD9LQ8IVG5 1584 aa9.16□□□□□ -0.94
PTPRR-210ENST00000550661 ADGRL1O94910 1474 aa9.16□□□□□ -0.94
PTPRR-210ENST00000550661 TMC2Q8TDI7 906 aa9.16□□□□□ -0.94
PTPRR-210ENST00000550661 CAMSAP2Q08AD1 1489 aa9.15□□□□□ -0.94
PTPRR-210ENST00000550661 TCOF1Q13428 1488 aaKnown RBP9.15□□□□□ -0.94
PTPRR-210ENST00000550661 AKNAQ7Z591 1439 aa9.15□□□□□ -0.94
PTPRR-210ENST00000550661 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms