RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 FAM50AQ14320 339 aaKnown RBP27.78■■■□□ 2.04
TUBA1A-206ENST00000550254 NPATQ14207 1427 aa27.76■■■□□ 2.04
TUBA1A-206ENST00000550254 UHRF1BP1Q6BDS2 1440 aa27.76■■■□□ 2.04
TUBA1A-206ENST00000550254 KIF15Q9NS87 1388 aa27.76■■■□□ 2.03
TUBA1A-206ENST00000550254 RRP7BPQ9NSQ0 103 aa27.76■■■□□ 2.03
TUBA1A-206ENST00000550254 KDM5DQ9BY66 1539 aa27.76■■■□□ 2.03
TUBA1A-206ENST00000550254 FAM135AQ9P2D6 1515 aa27.76■■■□□ 2.03
TUBA1A-206ENST00000550254 CHIC2Q9UKJ5 165 aa27.75■■■□□ 2.03
TUBA1A-206ENST00000550254 PTPRKQ15262 1439 aa27.75■■■□□ 2.03
TUBA1A-206ENST00000550254 MROH1Q8NDA8 1641 aa27.74■■■□□ 2.03
TUBA1A-206ENST00000550254 WASHC2CQ9Y4E1 1318 aa27.71■■■□□ 2.03
TUBA1A-206ENST00000550254 ANKRD30AQ9BXX3 1397 aa27.71■■■□□ 2.03
TUBA1A-206ENST00000550254 NCOA1Q15788 1441 aa27.7■■■□□ 2.03
TUBA1A-206ENST00000550254 ERBINQ96RT1 1412 aa27.7■■■□□ 2.03
TUBA1A-206ENST00000550254 ADGRL2O95490 1459 aa27.7■■■□□ 2.02
TUBA1A-206ENST00000550254 ZC3H13Q5T200 1668 aaKnown RBP27.66■■■□□ 2.02
TUBA1A-206ENST00000550254 ABCC3O15438 1527 aa27.66■■■□□ 2.02
TUBA1A-206ENST00000550254 MYO3AQ8NEV4 1616 aa27.65■■■□□ 2.02
TUBA1A-206ENST00000550254 PZPP20742 1482 aa27.64■■■□□ 2.02
TUBA1A-206ENST00000550254 CEP152O94986 1710 aa27.64■■■□□ 2.01
TUBA1A-206ENST00000550254 STRCQ7RTU9 1775 aa27.63■■■□□ 2.01
TUBA1A-206ENST00000550254 FBXO31Q5XUX0 539 aaPredicted RBP27.63■■■□□ 2.01
TUBA1A-206ENST00000550254 DEPDC5O75140 1603 aa27.63■■■□□ 2.01
TUBA1A-206ENST00000550254 PRDM15P57071 1507 aaPredicted RBP27.62■■■□□ 2.01
TUBA1A-206ENST00000550254 ZNF142P52746 1687 aaPredicted RBP27.61■■■□□ 2.01
TUBA1A-206ENST00000550254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.6■■■□□ 2.01
TUBA1A-206ENST00000550254 CAMSAP1Q5T5Y3 1602 aa27.58■■■□□ 2.01
TUBA1A-206ENST00000550254 CEP170BQ9Y4F5 1589 aaPredicted RBP27.57■■■□□ 2
TUBA1A-206ENST00000550254 TNRQ92752 1358 aa27.55■■■□□ 2
TUBA1A-206ENST00000550254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.54■■■□□ 2
TUBA1A-206ENST00000550254 RRBP1Q9P2E9 1410 aaKnown RBP27.54■■■□□ 2
TUBA1A-206ENST00000550254 ANKRD50Q9ULJ7 1429 aa27.52■■■□□ 2
TUBA1A-206ENST00000550254 VWDEQ8N2E2 1590 aa27.52■■■□□ 2
TUBA1A-206ENST00000550254 A2ML1A8K2U0 1454 aa27.51■■■□□ 2
TUBA1A-206ENST00000550254 ROCK1Q13464 1354 aa27.51■■□□□ 1.99
TUBA1A-206ENST00000550254 SPATA31D1Q6ZQQ2 1576 aa27.51■■□□□ 1.99
TUBA1A-206ENST00000550254 ITGAEP38570 1179 aa27.5■■□□□ 1.99
TUBA1A-206ENST00000550254 CFAP65Q6ZU64 1925 aaKnown RBP27.49■■□□□ 1.99
TUBA1A-206ENST00000550254 ERVK-7P63135 1459 aa27.48■■□□□ 1.99
TUBA1A-206ENST00000550254 ARHGAP31Q2M1Z3 1444 aa27.48■■□□□ 1.99
TUBA1A-206ENST00000550254 KANK1Q14678 1352 aa27.48■■□□□ 1.99
TUBA1A-206ENST00000550254 LMTK2Q8IWU2 1503 aa27.47■■□□□ 1.99
TUBA1A-206ENST00000550254 NLRP1Q9C000 1473 aa27.44■■□□□ 1.98
TUBA1A-206ENST00000550254 DMRT2Q9Y5R5 561 aa27.44■■□□□ 1.98
TUBA1A-206ENST00000550254 PLA2R1Q13018 1463 aa27.44■■□□□ 1.98
TUBA1A-206ENST00000550254 PTPRTO14522 1441 aa27.42■■□□□ 1.98
TUBA1A-206ENST00000550254 UNC13BO14795 1591 aa27.41■■□□□ 1.98
TUBA1A-206ENST00000550254 NCKAP5LQ9HCH0 1330 aa27.41■■□□□ 1.98
TUBA1A-206ENST00000550254 UGGT1Q9NYU2 1555 aa27.38■■□□□ 1.97
TUBA1A-206ENST00000550254 EFCAB6Q5THR3 1501 aa27.37■■□□□ 1.97
TUBA1A-206ENST00000550254 PKD2Q13563 968 aa27.35■■□□□ 1.97
TUBA1A-206ENST00000550254 TET3O43151 1660 aa27.33■■□□□ 1.97
TUBA1A-206ENST00000550254 THEMISQ8N1K5 641 aaPredicted RBP27.32■■□□□ 1.96
TUBA1A-206ENST00000550254 POLR1AO95602 1720 aaPredicted RBP27.32■■□□□ 1.96
TUBA1A-206ENST00000550254 UBR1Q8IWV7 1749 aa27.32■■□□□ 1.96
TUBA1A-206ENST00000550254 GCC2Q8IWJ2 1684 aa27.3■■□□□ 1.96
TUBA1A-206ENST00000550254 SYNMO15061 1565 aa27.3■■□□□ 1.96
TUBA1A-206ENST00000550254 IQGAP3Q86VI3 1631 aa27.3■■□□□ 1.96
TUBA1A-206ENST00000550254 ILDR1Q86SU0 546 aaPredicted RBP27.29■■□□□ 1.96
TUBA1A-206ENST00000550254 NOS1P29475 1434 aa27.29■■□□□ 1.96
TUBA1A-206ENST00000550254 NEURL4Q96JN8 1562 aa27.29■■□□□ 1.96
TUBA1A-206ENST00000550254 PIK3C2BO00750 1634 aa27.27■■□□□ 1.96
TUBA1A-206ENST00000550254 RPRD2Q5VT52 1461 aaKnown RBP27.26■■□□□ 1.95
TUBA1A-206ENST00000550254 NAIPQ13075 1403 aa27.26■■□□□ 1.95
TUBA1A-206ENST00000550254 E9PCH4 1651 aa27.24■■□□□ 1.95
TUBA1A-206ENST00000550254 CERKQ8TCT0 537 aa27.24■■□□□ 1.95
TUBA1A-206ENST00000550254 NUP155O75694 1391 aa27.23■■□□□ 1.95
TUBA1A-206ENST00000550254 ANKLE2Q86XL3 938 aa27.23■■□□□ 1.95
TUBA1A-206ENST00000550254 LTBP4Q8N2S1 1624 aa27.23■■□□□ 1.95
TUBA1A-206ENST00000550254 IDI1Q13907 227 aa27.22■■□□□ 1.95
TUBA1A-206ENST00000550254 MED14O60244 1454 aa27.19■■□□□ 1.94
TUBA1A-206ENST00000550254 KDM5AP29375 1690 aaKnown RBP27.19■■□□□ 1.94
TUBA1A-206ENST00000550254 HFM1A2PYH4 1435 aa27.18■■□□□ 1.94
TUBA1A-206ENST00000550254 ARHGAP23Q9P227 1491 aa27.18■■□□□ 1.94
TUBA1A-206ENST00000550254 SLIT1O75093 1534 aa27.17■■□□□ 1.94
TUBA1A-206ENST00000550254 FBXO41Q8TF61 875 aa27.17■■□□□ 1.94
TUBA1A-206ENST00000550254 NPHP4O75161 1426 aaPredicted RBP27.16■■□□□ 1.94
TUBA1A-206ENST00000550254 ZNF335Q9H4Z2 1342 aaPredicted RBP27.16■■□□□ 1.94
TUBA1A-206ENST00000550254 SLC52A1Q9NWF4 448 aa27.15■■□□□ 1.94
TUBA1A-206ENST00000550254 IQGAP1P46940 1657 aa27.14■■□□□ 1.93
TUBA1A-206ENST00000550254 ADGRB3O60242 1522 aa27.13■■□□□ 1.93
TUBA1A-206ENST00000550254 LTKP29376 864 aa27.12■■□□□ 1.93
TUBA1A-206ENST00000550254 STAG3Q9UJ98 1225 aa27.12■■□□□ 1.93
TUBA1A-206ENST00000550254 SCAF11Q99590 1463 aaKnown RBP27.11■■□□□ 1.93
TUBA1A-206ENST00000550254 TMEM2Q9UHN6 1383 aa27.1■■□□□ 1.93
TUBA1A-206ENST00000550254 MYO5BQ9ULV0 1848 aa27.09■■□□□ 1.93
TUBA1A-206ENST00000550254 TXNDC2Q86VQ3 553 aa27.08■■□□□ 1.93
TUBA1A-206ENST00000550254 TMEM131LA2VDJ0 1609 aa27.06■■□□□ 1.92
TUBA1A-206ENST00000550254 SPHKAPQ2M3C7 1700 aa27.04■■□□□ 1.92
TUBA1A-206ENST00000550254 EID1Q9Y6B2 187 aa27.04■■□□□ 1.92
TUBA1A-206ENST00000550254 IQSEC2Q5JU85 1478 aa27.02■■□□□ 1.92
TUBA1A-206ENST00000550254 TRIM52Q96A61 297 aa27.01■■□□□ 1.91
TUBA1A-206ENST00000550254 STRCP1A6NGW2 1772 aa26.99■■□□□ 1.91
TUBA1A-206ENST00000550254 ZFYVE9O95405 1425 aa26.98■■□□□ 1.91
TUBA1A-206ENST00000550254 CPS1P31327 1500 aa26.96■■□□□ 1.91
TUBA1A-206ENST00000550254 CHGAP10645 457 aaKnown RBP26.96■■□□□ 1.91
TUBA1A-206ENST00000550254 RIMS2Q9UQ26 1411 aa26.94■■□□□ 1.9
TUBA1A-206ENST00000550254 TRPM2O94759 1503 aa26.92■■□□□ 1.9
TUBA1A-206ENST00000550254 CLTCL1P53675 1640 aa26.92■■□□□ 1.9
TUBA1A-206ENST00000550254 SLC4A1APQ9BWU0 796 aaKnown RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms