RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 KIF3BO15066 747 aa26.67■■□□□ 1.86
CHMP1A-208ENST00000550102 NPATQ14207 1427 aa26.66■■□□□ 1.86
CHMP1A-208ENST00000550102 KIF15Q9NS87 1388 aa26.66■■□□□ 1.86
CHMP1A-208ENST00000550102 ZMYM3Q14202 1370 aa26.64■■□□□ 1.86
CHMP1A-208ENST00000550102 MROH1Q8NDA8 1641 aa26.63■■□□□ 1.85
CHMP1A-208ENST00000550102 MYO3AQ8NEV4 1616 aa26.62■■□□□ 1.85
CHMP1A-208ENST00000550102 ERBINQ96RT1 1412 aa26.62■■□□□ 1.85
CHMP1A-208ENST00000550102 ZNF142P52746 1687 aaPredicted RBP26.61■■□□□ 1.85
CHMP1A-208ENST00000550102 FAM50AQ14320 339 aaKnown RBP26.61■■□□□ 1.85
CHMP1A-208ENST00000550102 ADGRL2O95490 1459 aa26.61■■□□□ 1.85
CHMP1A-208ENST00000550102 ANKRD30AQ9BXX3 1397 aa26.59■■□□□ 1.85
CHMP1A-208ENST00000550102 CEP152O94986 1710 aa26.59■■□□□ 1.85
CHMP1A-208ENST00000550102 DEPDC5O75140 1603 aa26.59■■□□□ 1.85
CHMP1A-208ENST00000550102 PRDM15P57071 1507 aaPredicted RBP26.59■■□□□ 1.85
CHMP1A-208ENST00000550102 PTPRKQ15262 1439 aa26.58■■□□□ 1.85
CHMP1A-208ENST00000550102 ABCC3O15438 1527 aa26.57■■□□□ 1.84
CHMP1A-208ENST00000550102 HSPA2P54652 639 aa26.57■■□□□ 1.84
CHMP1A-208ENST00000550102 PZPP20742 1482 aa26.55■■□□□ 1.84
CHMP1A-208ENST00000550102 CAMSAP1Q5T5Y3 1602 aa26.54■■□□□ 1.84
CHMP1A-208ENST00000550102 RRP7BPQ9NSQ0 103 aa26.54■■□□□ 1.84
CHMP1A-208ENST00000550102 NCOA1Q15788 1441 aa26.54■■□□□ 1.84
CHMP1A-208ENST00000550102 WASHC2CQ9Y4E1 1318 aa26.53■■□□□ 1.84
CHMP1A-208ENST00000550102 PPARGC1BQ86YN6 1023 aaKnown RBP26.52■■□□□ 1.84
CHMP1A-208ENST00000550102 CEP170BQ9Y4F5 1589 aaPredicted RBP26.52■■□□□ 1.84
CHMP1A-208ENST00000550102 CHIC2Q9UKJ5 165 aa26.51■■□□□ 1.83
CHMP1A-208ENST00000550102 STRCQ7RTU9 1775 aa26.51■■□□□ 1.83
CHMP1A-208ENST00000550102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.47■■□□□ 1.833e-6■■■■□ 26.4
CHMP1A-208ENST00000550102 TNRQ92752 1358 aa26.43■■□□□ 1.82
CHMP1A-208ENST00000550102 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
CHMP1A-208ENST00000550102 SPATA31D1Q6ZQQ2 1576 aa26.41■■□□□ 1.82
CHMP1A-208ENST00000550102 VWDEQ8N2E2 1590 aa26.41■■□□□ 1.82
CHMP1A-208ENST00000550102 RRBP1Q9P2E9 1410 aaKnown RBP26.41■■□□□ 1.82
CHMP1A-208ENST00000550102 ROCK1Q13464 1354 aa26.41■■□□□ 1.82
CHMP1A-208ENST00000550102 KANK1Q14678 1352 aa26.41■■□□□ 1.82
CHMP1A-208ENST00000550102 CFAP65Q6ZU64 1925 aaKnown RBP26.41■■□□□ 1.82
CHMP1A-208ENST00000550102 ANKRD50Q9ULJ7 1429 aa26.4■■□□□ 1.82
CHMP1A-208ENST00000550102 ERVK-7P63135 1459 aa26.39■■□□□ 1.82
CHMP1A-208ENST00000550102 LMTK2Q8IWU2 1503 aa26.38■■□□□ 1.81
CHMP1A-208ENST00000550102 UNC13BO14795 1591 aa26.37■■□□□ 1.81
CHMP1A-208ENST00000550102 NLRP1Q9C000 1473 aa26.37■■□□□ 1.81
CHMP1A-208ENST00000550102 FBXO31Q5XUX0 539 aaPredicted RBP26.37■■□□□ 1.81
CHMP1A-208ENST00000550102 PLA2R1Q13018 1463 aa26.36■■□□□ 1.81
CHMP1A-208ENST00000550102 POLR1AO95602 1720 aaPredicted RBP26.35■■□□□ 1.81
CHMP1A-208ENST00000550102 ARHGAP31Q2M1Z3 1444 aa26.35■■□□□ 1.81
CHMP1A-208ENST00000550102 EFCAB6Q5THR3 1501 aa26.34■■□□□ 1.81
CHMP1A-208ENST00000550102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.33■■□□□ 1.812e-6■■□□□ 11.4
CHMP1A-208ENST00000550102 ITGAEP38570 1179 aa26.31■■□□□ 1.8
CHMP1A-208ENST00000550102 TET3O43151 1660 aa26.31■■□□□ 1.8
CHMP1A-208ENST00000550102 GCC2Q8IWJ2 1684 aa26.31■■□□□ 1.8
CHMP1A-208ENST00000550102 DMRT2Q9Y5R5 561 aa26.3■■□□□ 1.8
CHMP1A-208ENST00000550102 UGGT1Q9NYU2 1555 aa26.29■■□□□ 1.8
CHMP1A-208ENST00000550102 PTPRTO14522 1441 aa26.29■■□□□ 1.8
CHMP1A-208ENST00000550102 UBR1Q8IWV7 1749 aa26.26■■□□□ 1.79
CHMP1A-208ENST00000550102 IQGAP3Q86VI3 1631 aa26.26■■□□□ 1.79
CHMP1A-208ENST00000550102 ILDR1Q86SU0 546 aaPredicted RBP26.22■■□□□ 1.79
CHMP1A-208ENST00000550102 RPRD2Q5VT52 1461 aaKnown RBP26.22■■□□□ 1.79
CHMP1A-208ENST00000550102 SYNMO15061 1565 aa26.21■■□□□ 1.79
CHMP1A-208ENST00000550102 PIK3C2BO00750 1634 aa26.21■■□□□ 1.79
CHMP1A-208ENST00000550102 NEURL4Q96JN8 1562 aa26.2■■□□□ 1.79
CHMP1A-208ENST00000550102 KDM5AP29375 1690 aaKnown RBP26.2■■□□□ 1.78
CHMP1A-208ENST00000550102 PKD2Q13563 968 aa26.2■■□□□ 1.78
CHMP1A-208ENST00000550102 E9PCH4 1651 aa26.18■■□□□ 1.78
CHMP1A-208ENST00000550102 NCKAP5LQ9HCH0 1330 aa26.17■■□□□ 1.78
CHMP1A-208ENST00000550102 THEMISQ8N1K5 641 aaPredicted RBP26.15■■□□□ 1.78
CHMP1A-208ENST00000550102 NOS1P29475 1434 aa26.14■■□□□ 1.78
CHMP1A-208ENST00000550102 NAIPQ13075 1403 aa26.13■■□□□ 1.77
CHMP1A-208ENST00000550102 IQGAP1P46940 1657 aa26.12■■□□□ 1.77
CHMP1A-208ENST00000550102 FBXO41Q8TF61 875 aa26.11■■□□□ 1.77
CHMP1A-208ENST00000550102 HFM1A2PYH4 1435 aa26.11■■□□□ 1.77
CHMP1A-208ENST00000550102 ADGRB3O60242 1522 aa26.1■■□□□ 1.77
CHMP1A-208ENST00000550102 NUP155O75694 1391 aa26.09■■□□□ 1.77
CHMP1A-208ENST00000550102 SLIT1O75093 1534 aa26.09■■□□□ 1.77
CHMP1A-208ENST00000550102 LTBP4Q8N2S1 1624 aa26.08■■□□□ 1.77
CHMP1A-208ENST00000550102 MED14O60244 1454 aa26.07■■□□□ 1.76
CHMP1A-208ENST00000550102 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
CHMP1A-208ENST00000550102 MYO5BQ9ULV0 1848 aa26.07■■□□□ 1.76
CHMP1A-208ENST00000550102 ARHGAP23Q9P227 1491 aa26.06■■□□□ 1.76
CHMP1A-208ENST00000550102 SPHKAPQ2M3C7 1700 aa26.05■■□□□ 1.76
CHMP1A-208ENST00000550102 NPHP4O75161 1426 aaPredicted RBP26.05■■□□□ 1.76
CHMP1A-208ENST00000550102 SCAF11Q99590 1463 aaKnown RBP26.04■■□□□ 1.76
CHMP1A-208ENST00000550102 CERKQ8TCT0 537 aa26.04■■□□□ 1.76
CHMP1A-208ENST00000550102 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
CHMP1A-208ENST00000550102 IDI1Q13907 227 aa25.99■■□□□ 1.75
CHMP1A-208ENST00000550102 STAG3Q9UJ98 1225 aa25.99■■□□□ 1.75
CHMP1A-208ENST00000550102 TMEM131LA2VDJ0 1609 aa25.99■■□□□ 1.75
CHMP1A-208ENST00000550102 IQSEC2Q5JU85 1478 aa25.98■■□□□ 1.75
CHMP1A-208ENST00000550102 TMEM2Q9UHN6 1383 aa25.97■■□□□ 1.75
CHMP1A-208ENST00000550102 ZNF335Q9H4Z2 1342 aaPredicted RBP25.97■■□□□ 1.75
CHMP1A-208ENST00000550102 EID1Q9Y6B2 187 aa25.93■■□□□ 1.74
CHMP1A-208ENST00000550102 CPS1P31327 1500 aa25.93■■□□□ 1.74
CHMP1A-208ENST00000550102 TRPM2O94759 1503 aa25.9■■□□□ 1.74
CHMP1A-208ENST00000550102 TXNDC2Q86VQ3 553 aa25.9■■□□□ 1.74
CHMP1A-208ENST00000550102 LTKP29376 864 aa25.89■■□□□ 1.74
CHMP1A-208ENST00000550102 STRCP1A6NGW2 1772 aa25.88■■□□□ 1.73
CHMP1A-208ENST00000550102 CLTCL1P53675 1640 aa25.87■■□□□ 1.73
CHMP1A-208ENST00000550102 ZFYVE9O95405 1425 aa25.87■■□□□ 1.73
CHMP1A-208ENST00000550102 TRIM52Q96A61 297 aa25.85■■□□□ 1.73
CHMP1A-208ENST00000550102 KIF1BO60333 1816 aa25.85■■□□□ 1.73
CHMP1A-208ENST00000550102 RIMS2Q9UQ26 1411 aa25.83■■□□□ 1.73
CHMP1A-208ENST00000550102 CHGAP10645 457 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms