RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CNTLNQ9NXG0 1405 aa29.46■■■□□ 2.31
DDX54-207ENST00000550016 RNF17Q9BXT8 1623 aaKnown RBP29.45■■■□□ 2.31
DDX54-207ENST00000550016 CLTCQ00610 1675 aaKnown RBP29.45■■■□□ 2.31
DDX54-207ENST00000550016 ROCK1Q13464 1354 aa29.45■■■□□ 2.31
DDX54-207ENST00000550016 MROH2AA6NES4 1674 aa29.44■■■□□ 2.3
DDX54-207ENST00000550016 C3P01024 1663 aa29.42■■■□□ 2.3
DDX54-207ENST00000550016 PLPPR3Q6T4P5 718 aa29.39■■■□□ 2.3
DDX54-207ENST00000550016 FAM135AQ9P2D6 1515 aa29.39■■■□□ 2.3
DDX54-207ENST00000550016 CEBPAP49715 358 aaPredicted RBP29.37■■■□□ 2.29
DDX54-207ENST00000550016 SETD1BQ9UPS6 1966 aaKnown RBP29.37■■■□□ 2.29
DDX54-207ENST00000550016 MROH1Q8NDA8 1641 aa29.36■■■□□ 2.29
DDX54-207ENST00000550016 ANKRD50Q9ULJ7 1429 aa29.36■■■□□ 2.29
DDX54-207ENST00000550016 KDM5DQ9BY66 1539 aa29.35■■■□□ 2.29
DDX54-207ENST00000550016 WASHC2CQ9Y4E1 1318 aa29.35■■■□□ 2.29
DDX54-207ENST00000550016 ZMYM3Q14202 1370 aa29.35■■■□□ 2.29
DDX54-207ENST00000550016 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
DDX54-207ENST00000550016 ZC3H13Q5T200 1668 aaKnown RBP29.32■■■□□ 2.28
DDX54-207ENST00000550016 PRDM15P57071 1507 aaPredicted RBP29.3■■■□□ 2.28
DDX54-207ENST00000550016 CEP152O94986 1710 aa29.3■■■□□ 2.28
DDX54-207ENST00000550016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.28■■■□□ 2.289e-6■■■□□ 18.9
DDX54-207ENST00000550016 ABCC3O15438 1527 aa29.27■■■□□ 2.28
DDX54-207ENST00000550016 KANK1Q14678 1352 aa29.26■■■□□ 2.27
DDX54-207ENST00000550016 GCC2Q8IWJ2 1684 aa29.24■■■□□ 2.27
DDX54-207ENST00000550016 PREX1Q8TCU6 1659 aa29.23■■■□□ 2.27
DDX54-207ENST00000550016 CFAP65Q6ZU64 1925 aaKnown RBP29.22■■■□□ 2.27
DDX54-207ENST00000550016 NPATQ14207 1427 aa29.22■■■□□ 2.27
DDX54-207ENST00000550016 CAMSAP1Q5T5Y3 1602 aa29.22■■■□□ 2.27
DDX54-207ENST00000550016 VWDEQ8N2E2 1590 aa29.22■■■□□ 2.27
DDX54-207ENST00000550016 NAIPQ13075 1403 aa29.2■■■□□ 2.27
DDX54-207ENST00000550016 UNC13BO14795 1591 aa29.2■■■□□ 2.26
DDX54-207ENST00000550016 PZPP20742 1482 aa29.19■■■□□ 2.26
DDX54-207ENST00000550016 HFM1A2PYH4 1435 aa29.17■■■□□ 2.26
DDX54-207ENST00000550016 LMTK2Q8IWU2 1503 aa29.15■■■□□ 2.26
DDX54-207ENST00000550016 LMTK3Q96Q04 1460 aa29.15■■■□□ 2.26
DDX54-207ENST00000550016 FBXO31Q5XUX0 539 aaPredicted RBP29.13■■■□□ 2.25
DDX54-207ENST00000550016 UHRF1BP1Q6BDS2 1440 aa29.12■■■□□ 2.25
DDX54-207ENST00000550016 ARHGAP31Q2M1Z3 1444 aa29.11■■■□□ 2.25
DDX54-207ENST00000550016 IQGAP3Q86VI3 1631 aa29.09■■■□□ 2.25
DDX54-207ENST00000550016 TET3O43151 1660 aa29.09■■■□□ 2.25
DDX54-207ENST00000550016 NUP155O75694 1391 aa29.07■■■□□ 2.24
DDX54-207ENST00000550016 MYO3AQ8NEV4 1616 aa29.07■■■□□ 2.24
DDX54-207ENST00000550016 TNRQ92752 1358 aa29.07■■■□□ 2.24
DDX54-207ENST00000550016 EFCAB6Q5THR3 1501 aa29.06■■■□□ 2.24
DDX54-207ENST00000550016 SPATA31D1Q6ZQQ2 1576 aa29.05■■■□□ 2.24
DDX54-207ENST00000550016 ERVK-7P63135 1459 aa29.04■■■□□ 2.24
DDX54-207ENST00000550016 ZNF142P52746 1687 aaPredicted RBP29.03■■■□□ 2.24
DDX54-207ENST00000550016 HSPA2P54652 639 aa29.01■■■□□ 2.23
DDX54-207ENST00000550016 CEP170BQ9Y4F5 1589 aaPredicted RBP28.99■■■□□ 2.23
DDX54-207ENST00000550016 RPRD2Q5VT52 1461 aaKnown RBP28.98■■■□□ 2.23
DDX54-207ENST00000550016 E9PCH4 1651 aa28.98■■■□□ 2.23
DDX54-207ENST00000550016 SETD5Q9C0A6 1442 aa28.97■■■□□ 2.23
DDX54-207ENST00000550016 A2ML1A8K2U0 1454 aa28.97■■■□□ 2.23
DDX54-207ENST00000550016 TRIM52Q96A61 297 aa28.96■■■□□ 2.23
DDX54-207ENST00000550016 NLRP1Q9C000 1473 aa28.96■■■□□ 2.23
DDX54-207ENST00000550016 NOS1P29475 1434 aa28.92■■■□□ 2.22
DDX54-207ENST00000550016 ACIN1Q9UKV3 1341 aaKnown RBP28.91■■■□□ 2.22
DDX54-207ENST00000550016 SYNMO15061 1565 aa28.89■■■□□ 2.22
DDX54-207ENST00000550016 STRCQ7RTU9 1775 aa28.88■■■□□ 2.21
DDX54-207ENST00000550016 UGGT1Q9NYU2 1555 aa28.86■■■□□ 2.21
DDX54-207ENST00000550016 RAB3GAP2Q9H2M9 1393 aa28.85■■■□□ 2.21
DDX54-207ENST00000550016 UBR1Q8IWV7 1749 aa28.84■■■□□ 2.21
DDX54-207ENST00000550016 THEMISQ8N1K5 641 aaPredicted RBP28.83■■■□□ 2.21
DDX54-207ENST00000550016 SLC4A1APQ9BWU0 796 aaKnown RBP28.83■■■□□ 2.21
DDX54-207ENST00000550016 PIK3C2BO00750 1634 aa28.83■■■□□ 2.21
DDX54-207ENST00000550016 SPHKAPQ2M3C7 1700 aa28.83■■■□□ 2.21
DDX54-207ENST00000550016 IDI1Q13907 227 aa28.82■■■□□ 2.2
DDX54-207ENST00000550016 SLC52A1Q9NWF4 448 aa28.82■■■□□ 2.2
DDX54-207ENST00000550016 KDM5AP29375 1690 aaKnown RBP28.8■■■□□ 2.2
DDX54-207ENST00000550016 PLA2R1Q13018 1463 aa28.8■■■□□ 2.2
DDX54-207ENST00000550016 PKD2Q13563 968 aa28.8■■■□□ 2.2
DDX54-207ENST00000550016 HRCP23327 699 aa28.79■■■□□ 2.2
DDX54-207ENST00000550016 PTPRTO14522 1441 aa28.76■■■□□ 2.19
DDX54-207ENST00000550016 TRIM26Q12899 539 aaPredicted RBP28.75■■■□□ 2.19
DDX54-207ENST00000550016 MPHOSPH9Q99550 1183 aa28.75■■■□□ 2.19
DDX54-207ENST00000550016 STAG3Q9UJ98 1225 aa28.75■■■□□ 2.19
DDX54-207ENST00000550016 MYO5BQ9ULV0 1848 aa28.75■■■□□ 2.19
DDX54-207ENST00000550016 POLR1AO95602 1720 aaPredicted RBP28.74■■■□□ 2.19
DDX54-207ENST00000550016 DMRT2Q9Y5R5 561 aa28.74■■■□□ 2.19
DDX54-207ENST00000550016 NCKAP5LQ9HCH0 1330 aa28.72■■■□□ 2.19
DDX54-207ENST00000550016 ADGRB3O60242 1522 aa28.71■■■□□ 2.19
DDX54-207ENST00000550016 ANKLE2Q86XL3 938 aa28.7■■■□□ 2.18
DDX54-207ENST00000550016 TMEM131LA2VDJ0 1609 aa28.69■■■□□ 2.18
DDX54-207ENST00000550016 TRPM2O94759 1503 aa28.69■■■□□ 2.18
DDX54-207ENST00000550016 SLIT1O75093 1534 aa28.67■■■□□ 2.18
DDX54-207ENST00000550016 ARHGAP23Q9P227 1491 aa28.66■■■□□ 2.18
DDX54-207ENST00000550016 FOXD1Q16676 465 aa28.65■■■□□ 2.18
DDX54-207ENST00000550016 CLTCL1P53675 1640 aa28.65■■■□□ 2.18
DDX54-207ENST00000550016 KIF1BO60333 1816 aa28.64■■■□□ 2.18
DDX54-207ENST00000550016 TMEM2Q9UHN6 1383 aa28.63■■■□□ 2.17
DDX54-207ENST00000550016 CHGAP10645 457 aaKnown RBP28.63■■■□□ 2.17
DDX54-207ENST00000550016 NEURL4Q96JN8 1562 aa28.62■■■□□ 2.17
DDX54-207ENST00000550016 TXNDC2Q86VQ3 553 aa28.6■■■□□ 2.17
DDX54-207ENST00000550016 EID1Q9Y6B2 187 aa28.6■■■□□ 2.17
DDX54-207ENST00000550016 MED14O60244 1454 aa28.59■■■□□ 2.17
DDX54-207ENST00000550016 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
DDX54-207ENST00000550016 LTKP29376 864 aa28.58■■■□□ 2.17
DDX54-207ENST00000550016 IQGAP1P46940 1657 aa28.56■■■□□ 2.16
DDX54-207ENST00000550016 NPHP4O75161 1426 aaPredicted RBP28.55■■■□□ 2.16
DDX54-207ENST00000550016 HDGFP51858 240 aaKnown RBP28.54■■■□□ 2.16
DDX54-207ENST00000550016 ZFYVE9O95405 1425 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms