RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 ERBINQ96RT1 1412 aa22.63■■□□□ 1.21
GPN3-206ENST00000549963 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
GPN3-206ENST00000549963 WASHC2CQ9Y4E1 1318 aa22.61■■□□□ 1.21
GPN3-206ENST00000549963 PTPRKQ15262 1439 aa22.6■■□□□ 1.21
GPN3-206ENST00000549963 MROH2AA6NES4 1674 aa22.56■■□□□ 1.2
GPN3-206ENST00000549963 CLTCQ00610 1675 aaKnown RBP22.56■■□□□ 1.2
GPN3-206ENST00000549963 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
GPN3-206ENST00000549963 KANK1Q14678 1352 aa22.56■■□□□ 1.2
GPN3-206ENST00000549963 CEBPAP49715 358 aaPredicted RBP22.56■■□□□ 1.2
GPN3-206ENST00000549963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.2
GPN3-206ENST00000549963 FAM135AQ9P2D6 1515 aa22.56■■□□□ 1.2
GPN3-206ENST00000549963 ANKRD50Q9ULJ7 1429 aa22.56■■□□□ 1.2
GPN3-206ENST00000549963 RNF17Q9BXT8 1623 aaKnown RBP22.55■■□□□ 1.2
GPN3-206ENST00000549963 SETD1BQ9UPS6 1966 aaKnown RBP22.54■■□□□ 1.2
GPN3-206ENST00000549963 KDM5DQ9BY66 1539 aa22.52■■□□□ 1.2
GPN3-206ENST00000549963 C3P01024 1663 aa22.52■■□□□ 1.2
GPN3-206ENST00000549963 ZC3H13Q5T200 1668 aaKnown RBP22.48■■□□□ 1.19
GPN3-206ENST00000549963 DEPDC5O75140 1603 aa22.46■■□□□ 1.19
GPN3-206ENST00000549963 PRDM15P57071 1507 aaPredicted RBP22.45■■□□□ 1.18
GPN3-206ENST00000549963 NPATQ14207 1427 aa22.44■■□□□ 1.18
GPN3-206ENST00000549963 MROH1Q8NDA8 1641 aa22.44■■□□□ 1.18
GPN3-206ENST00000549963 ABCC3O15438 1527 aa22.43■■□□□ 1.18
GPN3-206ENST00000549963 CEP152O94986 1710 aa22.43■■□□□ 1.18
GPN3-206ENST00000549963 NAIPQ13075 1403 aa22.4■■□□□ 1.18
GPN3-206ENST00000549963 PREX1Q8TCU6 1659 aa22.4■■□□□ 1.18
GPN3-206ENST00000549963 PZPP20742 1482 aa22.4■■□□□ 1.18
GPN3-206ENST00000549963 HFM1A2PYH4 1435 aa22.4■■□□□ 1.18
GPN3-206ENST00000549963 UHRF1BP1Q6BDS2 1440 aa22.4■■□□□ 1.18
GPN3-206ENST00000549963 CFAP65Q6ZU64 1925 aaKnown RBP22.39■■□□□ 1.17
GPN3-206ENST00000549963 FBXO31Q5XUX0 539 aaPredicted RBP22.38■■□□□ 1.17
GPN3-206ENST00000549963 GCC2Q8IWJ2 1684 aa22.38■■□□□ 1.17
GPN3-206ENST00000549963 CAMSAP1Q5T5Y3 1602 aa22.38■■□□□ 1.17
GPN3-206ENST00000549963 NUP155O75694 1391 aa22.38■■□□□ 1.17
GPN3-206ENST00000549963 ACIN1Q9UKV3 1341 aaKnown RBP22.37■■□□□ 1.17
GPN3-206ENST00000549963 UNC13BO14795 1591 aa22.36■■□□□ 1.17
GPN3-206ENST00000549963 VWDEQ8N2E2 1590 aa22.35■■□□□ 1.17
GPN3-206ENST00000549963 ARHGAP31Q2M1Z3 1444 aa22.35■■□□□ 1.17
GPN3-206ENST00000549963 TRIM52Q96A61 297 aa22.35■■□□□ 1.17
GPN3-206ENST00000549963 LMTK2Q8IWU2 1503 aa22.35■■□□□ 1.17
GPN3-206ENST00000549963 TNRQ92752 1358 aa22.34■■□□□ 1.17
GPN3-206ENST00000549963 LMTK3Q96Q04 1460 aa22.32■■□□□ 1.16
GPN3-206ENST00000549963 IQGAP3Q86VI3 1631 aa22.29■■□□□ 1.16
GPN3-206ENST00000549963 TET3O43151 1660 aa22.29■■□□□ 1.16
GPN3-206ENST00000549963 HSPA2P54652 639 aa22.28■■□□□ 1.16
GPN3-206ENST00000549963 SETD5Q9C0A6 1442 aa22.28■■□□□ 1.16
GPN3-206ENST00000549963 EFCAB6Q5THR3 1501 aa22.27■■□□□ 1.16
GPN3-206ENST00000549963 ERVK-7P63135 1459 aa22.27■■□□□ 1.16
GPN3-206ENST00000549963 RPRD2Q5VT52 1461 aaKnown RBP22.27■■□□□ 1.16
GPN3-206ENST00000549963 SPATA31D1Q6ZQQ2 1576 aa22.26■■□□□ 1.15
GPN3-206ENST00000549963 MYO3AQ8NEV4 1616 aa22.26■■□□□ 1.15
GPN3-206ENST00000549963 NLRP1Q9C000 1473 aa22.26■■□□□ 1.15
GPN3-206ENST00000549963 THEMISQ8N1K5 641 aaPredicted RBP22.24■■□□□ 1.15
GPN3-206ENST00000549963 A2ML1A8K2U0 1454 aa22.23■■□□□ 1.15
GPN3-206ENST00000549963 CEP170BQ9Y4F5 1589 aaPredicted RBP22.22■■□□□ 1.15
GPN3-206ENST00000549963 SLC4A1APQ9BWU0 796 aaKnown RBP22.22■■□□□ 1.15
GPN3-206ENST00000549963 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
GPN3-206ENST00000549963 ZNF142P52746 1687 aaPredicted RBP22.21■■□□□ 1.15
GPN3-206ENST00000549963 SLC52A1Q9NWF4 448 aa22.21■■□□□ 1.15
GPN3-206ENST00000549963 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
GPN3-206ENST00000549963 E9PCH4 1651 aa22.19■■□□□ 1.14
GPN3-206ENST00000549963 HRCP23327 699 aa22.18■■□□□ 1.14
GPN3-206ENST00000549963 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
GPN3-206ENST00000549963 UGGT1Q9NYU2 1555 aa22.17■■□□□ 1.14
GPN3-206ENST00000549963 NOS1P29475 1434 aa22.17■■□□□ 1.14
GPN3-206ENST00000549963 RAB3GAP2Q9H2M9 1393 aa22.16■■□□□ 1.14
GPN3-206ENST00000549963 PKD2Q13563 968 aa22.16■■□□□ 1.14
GPN3-206ENST00000549963 IDI1Q13907 227 aa22.16■■□□□ 1.14
GPN3-206ENST00000549963 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
GPN3-206ENST00000549963 ANKLE2Q86XL3 938 aa22.12■■□□□ 1.13
GPN3-206ENST00000549963 SYNMO15061 1565 aa22.11■■□□□ 1.13
GPN3-206ENST00000549963 PLA2R1Q13018 1463 aa22.1■■□□□ 1.13
GPN3-206ENST00000549963 CHGAP10645 457 aaKnown RBP22.09■■□□□ 1.13
GPN3-206ENST00000549963 PIK3C2BO00750 1634 aa22.09■■□□□ 1.13
GPN3-206ENST00000549963 SPHKAPQ2M3C7 1700 aa22.09■■□□□ 1.13
GPN3-206ENST00000549963 UBR1Q8IWV7 1749 aa22.09■■□□□ 1.13
GPN3-206ENST00000549963 NCKAP5LQ9HCH0 1330 aa22.08■■□□□ 1.13
GPN3-206ENST00000549963 STRCQ7RTU9 1775 aa22.08■■□□□ 1.13
GPN3-206ENST00000549963 HDGFP51858 240 aaKnown RBP22.08■■□□□ 1.13
GPN3-206ENST00000549963 EID1Q9Y6B2 187 aa22.08■■□□□ 1.13
GPN3-206ENST00000549963 KDM5AP29375 1690 aaKnown RBP22.07■■□□□ 1.12
GPN3-206ENST00000549963 PTPRTO14522 1441 aa22.06■■□□□ 1.12
GPN3-206ENST00000549963 TXNDC2Q86VQ3 553 aa22.03■■□□□ 1.12
GPN3-206ENST00000549963 ADGRB3O60242 1522 aa22.01■■□□□ 1.11
GPN3-206ENST00000549963 POLR1AO95602 1720 aaPredicted RBP22.01■■□□□ 1.11
GPN3-206ENST00000549963 FOXD1Q16676 465 aa22.01■■□□□ 1.11
GPN3-206ENST00000549963 TMEM2Q9UHN6 1383 aa22■■□□□ 1.11
GPN3-206ENST00000549963 TRPM2O94759 1503 aa21.99■■□□□ 1.11
GPN3-206ENST00000549963 SLIT1O75093 1534 aa21.98■■□□□ 1.11
GPN3-206ENST00000549963 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.98■■□□□ 1.11
GPN3-206ENST00000549963 KIF1BO60333 1816 aa21.98■■□□□ 1.11
GPN3-206ENST00000549963 TMEM131LA2VDJ0 1609 aa21.98■■□□□ 1.11
GPN3-206ENST00000549963 ZNF326Q5BKZ1 582 aaKnown RBP21.97■■□□□ 1.11
GPN3-206ENST00000549963 MYO5BQ9ULV0 1848 aa21.96■■□□□ 1.11
GPN3-206ENST00000549963 PPP1R15AO75807 674 aaPredicted RBP21.96■■□□□ 1.11
GPN3-206ENST00000549963 SCAF11Q99590 1463 aaKnown RBP21.96■■□□□ 1.11
GPN3-206ENST00000549963 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
GPN3-206ENST00000549963 LTKP29376 864 aa21.95■■□□□ 1.1
GPN3-206ENST00000549963 CCDC144AA2RUR9 1427 aa21.95■■□□□ 1.1
GPN3-206ENST00000549963 BCANQ96GW7 911 aa21.94■■□□□ 1.1
GPN3-206ENST00000549963 NPHP4O75161 1426 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms