RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 SAMD9LQ8IVG5 1584 aa10.12□□□□□ -0.79
NPAS3-207ENST00000549770 CCNB3Q8WWL7 1395 aa10.12□□□□□ -0.79
NPAS3-207ENST00000549770 ZNF518AQ6AHZ1 1483 aa10.11□□□□□ -0.79
NPAS3-207ENST00000549770 BCORL1Q5H9F3 1711 aa10.11□□□□□ -0.79
NPAS3-207ENST00000549770 TRAPPC8Q9Y2L5 1435 aa10.11□□□□□ -0.79
NPAS3-207ENST00000549770 MNX1P50219 401 aaPredicted RBP10.11□□□□□ -0.79
NPAS3-207ENST00000549770 MADDQ8WXG6 1647 aa10.11□□□□□ -0.79
NPAS3-207ENST00000549770 KDM5CP41229 1560 aa10.1□□□□□ -0.79
NPAS3-207ENST00000549770 ADAMTSL3P82987 1691 aa10.1□□□□□ -0.79
NPAS3-207ENST00000549770 MLECQ14165 292 aa10.1□□□□□ -0.79
NPAS3-207ENST00000549770 SYCP2Q9BX26 1530 aa10.1□□□□□ -0.79
NPAS3-207ENST00000549770 MAGI2Q86UL8 1455 aa10.1□□□□□ -0.79
NPAS3-207ENST00000549770 HECW2Q9P2P5 1572 aa10.09□□□□□ -0.79
NPAS3-207ENST00000549770 HNRNPMP52272 730 aaKnown RBP eCLIP10.09□□□□□ -0.79
NPAS3-207ENST00000549770 CFDP1Q9UEE9 299 aaPredicted RBP10.09□□□□□ -0.79
NPAS3-207ENST00000549770 SUPT6HQ7KZ85 1726 aaKnown RBP10.09□□□□□ -0.79
NPAS3-207ENST00000549770 ABCA6Q8N139 1617 aa10.08□□□□□ -0.8
NPAS3-207ENST00000549770 ATP10AO60312 1499 aa10.08□□□□□ -0.8
NPAS3-207ENST00000549770 NCOA2Q15596 1464 aa10.08□□□□□ -0.8
NPAS3-207ENST00000549770 DIP2CQ9Y2E4 1556 aa10.08□□□□□ -0.8
NPAS3-207ENST00000549770 RIMS1Q86UR5 1692 aaKnown RBP10.08□□□□□ -0.8
NPAS3-207ENST00000549770 ZNF644Q9H582 1327 aaPredicted RBP10.07□□□□□ -0.8
NPAS3-207ENST00000549770 KANK4Q5T7N3 995 aaPredicted RBP10.07□□□□□ -0.8
NPAS3-207ENST00000549770 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
NPAS3-207ENST00000549770 KIDINS220Q9ULH0 1771 aa10.06□□□□□ -0.8
NPAS3-207ENST00000549770 PTPRMP28827 1452 aa10.06□□□□□ -0.8
NPAS3-207ENST00000549770 LRRC9Q6ZRR7 1453 aa10.06□□□□□ -0.8
NPAS3-207ENST00000549770 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
NPAS3-207ENST00000549770 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
NPAS3-207ENST00000549770 ZRANB1Q9UGI0 708 aa10.04□□□□□ -0.8
NPAS3-207ENST00000549770 PLEKHH2Q8IVE3 1493 aa10.04□□□□□ -0.8
NPAS3-207ENST00000549770 SPAG9O60271 1321 aaKnown RBP10.03□□□□□ -0.8
NPAS3-207ENST00000549770 ATP7AQ04656 1500 aa10.02□□□□□ -0.8
NPAS3-207ENST00000549770 INO80Q9ULG1 1556 aaPredicted RBP10.02□□□□□ -0.81
NPAS3-207ENST00000549770 KIAA1107Q9UPP5 1409 aa10.02□□□□□ -0.81
NPAS3-207ENST00000549770 PAK3O75914 559 aaPredicted RBP10.02□□□□□ -0.81
NPAS3-207ENST00000549770 CAMSAP2Q08AD1 1489 aa10.02□□□□□ -0.81
NPAS3-207ENST00000549770 MAP3K1Q13233 1512 aa10.02□□□□□ -0.81
NPAS3-207ENST00000549770 VASPP50552 380 aaPredicted RBP10.01□□□□□ -0.81
NPAS3-207ENST00000549770 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
NPAS3-207ENST00000549770 REREQ9P2R6 1566 aa10.01□□□□□ -0.81
NPAS3-207ENST00000549770 MBD5Q9P267 1494 aa10□□□□□ -0.81
NPAS3-207ENST00000549770 CEBPAP49715 358 aaPredicted RBP9.98□□□□□ -0.81
NPAS3-207ENST00000549770 CCDC141Q6ZP82 1450 aa9.98□□□□□ -0.81
NPAS3-207ENST00000549770 ADGBQ8N7X0 1667 aa9.97□□□□□ -0.81
NPAS3-207ENST00000549770 MYOM3Q5VTT5 1437 aa9.97□□□□□ -0.81
NPAS3-207ENST00000549770 A2MP01023 1474 aa9.97□□□□□ -0.81
NPAS3-207ENST00000549770 AGLP35573 1532 aa9.97□□□□□ -0.81
NPAS3-207ENST00000549770 TSPYL2Q9H2G4 693 aaPredicted RBP9.96□□□□□ -0.82
NPAS3-207ENST00000549770 PLXNC1O60486 1568 aa9.96□□□□□ -0.82
NPAS3-207ENST00000549770 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
NPAS3-207ENST00000549770 ESF1Q9H501 851 aaKnown RBP9.95□□□□□ -0.82
NPAS3-207ENST00000549770 ARHGEF5Q12774 1597 aa9.95□□□□□ -0.82
NPAS3-207ENST00000549770 C3P01024 1663 aa9.94□□□□□ -0.82
NPAS3-207ENST00000549770 LMTK3Q96Q04 1460 aa9.94□□□□□ -0.82
NPAS3-207ENST00000549770 ZNF579Q8NAF0 562 aaKnown RBP9.94□□□□□ -0.82
NPAS3-207ENST00000549770 PTPN23Q9H3S7 1636 aa9.93□□□□□ -0.82
NPAS3-207ENST00000549770 RTEL1-TNFRSF6BF6WH68 1400 aa9.93□□□□□ -0.82
NPAS3-207ENST00000549770 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
NPAS3-207ENST00000549770 HSPA2P54652 639 aa9.93□□□□□ -0.82
NPAS3-207ENST00000549770 GGT6Q6P531 493 aa9.93□□□□□ -0.82
NPAS3-207ENST00000549770 PPARGC1BQ86YN6 1023 aaKnown RBP9.93□□□□□ -0.82
NPAS3-207ENST00000549770 CLTCQ00610 1675 aaKnown RBP9.93□□□□□ -0.82
NPAS3-207ENST00000549770 MIA2Q96PC5 1412 aa9.92□□□□□ -0.82
NPAS3-207ENST00000549770 TSPY4P0CV99 314 aa9.92□□□□□ -0.82
NPAS3-207ENST00000549770 TSPY10P0CW01 314 aa9.92□□□□□ -0.82
NPAS3-207ENST00000549770 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
NPAS3-207ENST00000549770 FGD6Q6ZV73 1430 aa9.91□□□□□ -0.82
NPAS3-207ENST00000549770 DHX29Q7Z478 1369 aaKnown RBP9.91□□□□□ -0.82
NPAS3-207ENST00000549770 PREX1Q8TCU6 1659 aa9.91□□□□□ -0.82
NPAS3-207ENST00000549770 PHF12Q96QT6 1004 aa9.91□□□□□ -0.82
NPAS3-207ENST00000549770 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.82
NPAS3-207ENST00000549770 MAST1Q9Y2H9 1570 aa9.9□□□□□ -0.82
NPAS3-207ENST00000549770 KIF3BO15066 747 aa9.9□□□□□ -0.82
NPAS3-207ENST00000549770 RSPH4AQ5TD94 716 aa9.9□□□□□ -0.82
NPAS3-207ENST00000549770 NUBP1P53384 320 aa9.89□□□□□ -0.83
NPAS3-207ENST00000549770 DCBLD2Q96PD2 775 aa9.89□□□□□ -0.83
NPAS3-207ENST00000549770 MROH2AA6NES4 1674 aa9.89□□□□□ -0.83
NPAS3-207ENST00000549770 CNTLNQ9NXG0 1405 aa9.89□□□□□ -0.83
NPAS3-207ENST00000549770 CLCN6P51797 869 aa9.88□□□□□ -0.83
NPAS3-207ENST00000549770 FAM50AQ14320 339 aaKnown RBP9.88□□□□□ -0.83
NPAS3-207ENST00000549770 CHIC2Q9UKJ5 165 aa9.88□□□□□ -0.83
NPAS3-207ENST00000549770 DNMT1P26358 1616 aaKnown RBP9.88□□□□□ -0.83
NPAS3-207ENST00000549770 ABCC5O15440 1437 aa9.88□□□□□ -0.83
NPAS3-207ENST00000549770 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
NPAS3-207ENST00000549770 TCOF1Q13428 1488 aaKnown RBP9.87□□□□□ -0.83
NPAS3-207ENST00000549770 DAPK1P53355 1430 aa9.87□□□□□ -0.83
NPAS3-207ENST00000549770 UHRF1BP1Q6BDS2 1440 aa9.87□□□□□ -0.83
NPAS3-207ENST00000549770 IFNLR1Q8IU57 520 aaPredicted RBP9.86□□□□□ -0.83
NPAS3-207ENST00000549770 RRP7BPQ9NSQ0 103 aa9.86□□□□□ -0.83
NPAS3-207ENST00000549770 CCDC61Q9Y6R9 512 aa9.86□□□□□ -0.83
NPAS3-207ENST00000549770 FAM212AQ96EL1 285 aa9.85□□□□□ -0.83
NPAS3-207ENST00000549770 KIF15Q9NS87 1388 aa9.85□□□□□ -0.83
NPAS3-207ENST00000549770 SHANK2Q9UPX8 1470 aa9.85□□□□□ -0.83
NPAS3-207ENST00000549770 SETD1BQ9UPS6 1966 aaKnown RBP9.84□□□□□ -0.83
NPAS3-207ENST00000549770 KDM5DQ9BY66 1539 aa9.84□□□□□ -0.83
NPAS3-207ENST00000549770 DUOX2Q9NRD8 1548 aa9.84□□□□□ -0.83
NPAS3-207ENST00000549770 RNF17Q9BXT8 1623 aaKnown RBP9.84□□□□□ -0.83
NPAS3-207ENST00000549770 WASHC2CQ9Y4E1 1318 aa9.83□□□□□ -0.84
NPAS3-207ENST00000549770 PTPRKQ15262 1439 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms