RNA–Protein interactions for RNA: ENST00000549559.2

SYT1-207, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-207ENST00000549559 AGLP35573 1532 aa18.72■□□□□ 0.59
SYT1-207ENST00000549559 RRP7BPQ9NSQ0 103 aa18.7■□□□□ 0.58
SYT1-207ENST00000549559 ARID4BQ4LE39 1312 aaPredicted RBP18.69■□□□□ 0.58
SYT1-207ENST00000549559 SIGLEC1Q9BZZ2 1709 aa18.69■□□□□ 0.58
SYT1-207ENST00000549559 ERBINQ96RT1 1412 aa18.68■□□□□ 0.58
SYT1-207ENST00000549559 EIF2AK4Q9P2K8 1649 aaKnown RBP18.67■□□□□ 0.58
SYT1-207ENST00000549559 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
SYT1-207ENST00000549559 BCORL1Q5H9F3 1711 aa18.66■□□□□ 0.58
SYT1-207ENST00000549559 GCC2Q8IWJ2 1684 aa18.64■□□□□ 0.57
SYT1-207ENST00000549559 HFM1A2PYH4 1435 aa18.64■□□□□ 0.57
SYT1-207ENST00000549559 ANKRD50Q9ULJ7 1429 aa18.64■□□□□ 0.57
SYT1-207ENST00000549559 KIF3BO15066 747 aa18.62■□□□□ 0.57
SYT1-207ENST00000549559 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
SYT1-207ENST00000549559 NAIPQ13075 1403 aa18.62■□□□□ 0.57
SYT1-207ENST00000549559 RNF17Q9BXT8 1623 aaKnown RBP18.61■□□□□ 0.57
SYT1-207ENST00000549559 CACNB1Q02641 598 aaPredicted RBP18.59■□□□□ 0.57
SYT1-207ENST00000549559 MLECQ14165 292 aa18.58■□□□□ 0.56
SYT1-207ENST00000549559 FAM135AQ9P2D6 1515 aa18.57■□□□□ 0.56
SYT1-207ENST00000549559 ADAMTSL3P82987 1691 aa18.57■□□□□ 0.56
SYT1-207ENST00000549559 DEPDC5O75140 1603 aa18.56■□□□□ 0.56
SYT1-207ENST00000549559 GGT6Q6P531 493 aa18.56■□□□□ 0.56
SYT1-207ENST00000549559 PRDM15P57071 1507 aaPredicted RBP18.55■□□□□ 0.56
SYT1-207ENST00000549559 MROH1Q8NDA8 1641 aa18.55■□□□□ 0.56
SYT1-207ENST00000549559 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
SYT1-207ENST00000549559 FER1L4A9Z1Z3 1794 aa18.54■□□□□ 0.56
SYT1-207ENST00000549559 SETD5Q9C0A6 1442 aa18.54■□□□□ 0.56
SYT1-207ENST00000549559 UNC13BO14795 1591 aa18.54■□□□□ 0.56
SYT1-207ENST00000549559 MADDQ8WXG6 1647 aa18.53■□□□□ 0.56
SYT1-207ENST00000549559 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
SYT1-207ENST00000549559 ESF1Q9H501 851 aaKnown RBP18.52■□□□□ 0.56
SYT1-207ENST00000549559 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.56
SYT1-207ENST00000549559 KANK1Q14678 1352 aa18.52■□□□□ 0.55
SYT1-207ENST00000549559 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
SYT1-207ENST00000549559 RIMS1Q86UR5 1692 aaKnown RBP18.5■□□□□ 0.55
SYT1-207ENST00000549559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
SYT1-207ENST00000549559 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
SYT1-207ENST00000549559 ABCC3O15438 1527 aa18.49■□□□□ 0.55
SYT1-207ENST00000549559 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
SYT1-207ENST00000549559 MROH2AA6NES4 1674 aa18.48■□□□□ 0.55
SYT1-207ENST00000549559 CLTCQ00610 1675 aaKnown RBP18.48■□□□□ 0.55
SYT1-207ENST00000549559 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
SYT1-207ENST00000549559 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
SYT1-207ENST00000549559 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
SYT1-207ENST00000549559 CEP152O94986 1710 aa18.46■□□□□ 0.55
SYT1-207ENST00000549559 RAB3GAP2Q9H2M9 1393 aa18.46■□□□□ 0.55
SYT1-207ENST00000549559 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
SYT1-207ENST00000549559 NUP155O75694 1391 aa18.45■□□□□ 0.54
SYT1-207ENST00000549559 LMTK2Q8IWU2 1503 aa18.45■□□□□ 0.54
SYT1-207ENST00000549559 PTPRMP28827 1452 aa18.43■□□□□ 0.54
SYT1-207ENST00000549559 CAMSAP1Q5T5Y3 1602 aa18.42■□□□□ 0.54
SYT1-207ENST00000549559 HRCP23327 699 aa18.42■□□□□ 0.54
SYT1-207ENST00000549559 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
SYT1-207ENST00000549559 TET3O43151 1660 aa18.41■□□□□ 0.54
SYT1-207ENST00000549559 ZMYM3Q14202 1370 aa18.41■□□□□ 0.54
SYT1-207ENST00000549559 EFCAB6Q5THR3 1501 aa18.4■□□□□ 0.54
SYT1-207ENST00000549559 C3P01024 1663 aa18.4■□□□□ 0.54
SYT1-207ENST00000549559 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
SYT1-207ENST00000549559 PZPP20742 1482 aa18.39■□□□□ 0.53
SYT1-207ENST00000549559 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
SYT1-207ENST00000549559 RPRD2Q5VT52 1461 aaKnown RBP18.36■□□□□ 0.53
SYT1-207ENST00000549559 NPATQ14207 1427 aa18.35■□□□□ 0.53
SYT1-207ENST00000549559 CEBPAP49715 358 aaPredicted RBP18.34■□□□□ 0.53
SYT1-207ENST00000549559 SLC4A1APQ9BWU0 796 aaKnown RBP18.33■□□□□ 0.52
SYT1-207ENST00000549559 E9PCH4 1651 aa18.33■□□□□ 0.52
SYT1-207ENST00000549559 ERVK-7P63135 1459 aa18.32■□□□□ 0.52
SYT1-207ENST00000549559 PREX1Q8TCU6 1659 aa18.31■□□□□ 0.52
SYT1-207ENST00000549559 SPATA31D1Q6ZQQ2 1576 aa18.31■□□□□ 0.52
SYT1-207ENST00000549559 MPHOSPH9Q99550 1183 aa18.3■□□□□ 0.52
SYT1-207ENST00000549559 PKD2Q13563 968 aa18.29■□□□□ 0.52
SYT1-207ENST00000549559 SETD1BQ9UPS6 1966 aaKnown RBP18.29■□□□□ 0.52
SYT1-207ENST00000549559 CFAP65Q6ZU64 1925 aaKnown RBP18.29■□□□□ 0.52
SYT1-207ENST00000549559 TNRQ92752 1358 aa18.29■□□□□ 0.52
SYT1-207ENST00000549559 FBXO31Q5XUX0 539 aaPredicted RBP18.28■□□□□ 0.52
SYT1-207ENST00000549559 NOS1P29475 1434 aa18.27■□□□□ 0.52
SYT1-207ENST00000549559 SPHKAPQ2M3C7 1700 aa18.25■□□□□ 0.51
SYT1-207ENST00000549559 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
SYT1-207ENST00000549559 SYNMO15061 1565 aa18.24■□□□□ 0.51
SYT1-207ENST00000549559 PTPRTO14522 1441 aa18.23■□□□□ 0.51
SYT1-207ENST00000549559 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
SYT1-207ENST00000549559 NLRP1Q9C000 1473 aa18.23■□□□□ 0.51
SYT1-207ENST00000549559 C1QBPQ07021 282 aaKnown RBP18.23■□□□□ 0.51
SYT1-207ENST00000549559 TRPM2O94759 1503 aa18.22■□□□□ 0.51
SYT1-207ENST00000549559 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
SYT1-207ENST00000549559 SLC52A1Q9NWF4 448 aa18.19■□□□□ 0.5
SYT1-207ENST00000549559 A2ML1A8K2U0 1454 aa18.19■□□□□ 0.5
SYT1-207ENST00000549559 PLA2R1Q13018 1463 aa18.19■□□□□ 0.5
SYT1-207ENST00000549559 CEP170BQ9Y4F5 1589 aaPredicted RBP18.18■□□□□ 0.5
SYT1-207ENST00000549559 PIK3C2BO00750 1634 aa18.18■□□□□ 0.5
SYT1-207ENST00000549559 KCNA4P22459 653 aa18.17■□□□□ 0.5
SYT1-207ENST00000549559 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
SYT1-207ENST00000549559 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
SYT1-207ENST00000549559 CLTCL1P53675 1640 aa18.15■□□□□ 0.5
SYT1-207ENST00000549559 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
SYT1-207ENST00000549559 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.5
SYT1-207ENST00000549559 IDI1Q13907 227 aa18.14■□□□□ 0.49
SYT1-207ENST00000549559 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.49
SYT1-207ENST00000549559 ANKRD30BQ9BXX2 1392 aa18.14■□□□□ 0.49
SYT1-207ENST00000549559 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
SYT1-207ENST00000549559 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
SYT1-207ENST00000549559 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms