RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 KDM5DQ9BY66 1539 aa30.63■■■□□ 2.49
TUBA1C-205ENST00000549554 NPATQ14207 1427 aa30.62■■■□□ 2.49
TUBA1C-205ENST00000549554 FAM50AQ14320 339 aaKnown RBP30.61■■■□□ 2.49
TUBA1C-205ENST00000549554 KIF15Q9NS87 1388 aa30.61■■■□□ 2.49
TUBA1C-205ENST00000549554 ANKRD30AQ9BXX3 1397 aa30.57■■■□□ 2.48
TUBA1C-205ENST00000549554 ZC3H13Q5T200 1668 aaKnown RBP30.57■■■□□ 2.48
TUBA1C-205ENST00000549554 HSPA2P54652 639 aa30.56■■■□□ 2.48
TUBA1C-205ENST00000549554 ERBINQ96RT1 1412 aa30.56■■■□□ 2.48
TUBA1C-205ENST00000549554 WASHC2CQ9Y4E1 1318 aa30.54■■■□□ 2.48
TUBA1C-205ENST00000549554 RRP7BPQ9NSQ0 103 aa30.53■■■□□ 2.48
TUBA1C-205ENST00000549554 PTPRKQ15262 1439 aa30.52■■■□□ 2.48
TUBA1C-205ENST00000549554 ADGRL2O95490 1459 aa30.51■■■□□ 2.48
TUBA1C-205ENST00000549554 CHIC2Q9UKJ5 165 aa30.51■■■□□ 2.47
TUBA1C-205ENST00000549554 PPARGC1BQ86YN6 1023 aaKnown RBP30.5■■■□□ 2.47
TUBA1C-205ENST00000549554 MROH1Q8NDA8 1641 aa30.5■■■□□ 2.47
TUBA1C-205ENST00000549554 MYO3AQ8NEV4 1616 aa30.5■■■□□ 2.47
TUBA1C-205ENST00000549554 NCOA1Q15788 1441 aa30.48■■■□□ 2.47
TUBA1C-205ENST00000549554 PZPP20742 1482 aa30.48■■■□□ 2.47
TUBA1C-205ENST00000549554 ZNF142P52746 1687 aaPredicted RBP30.47■■■□□ 2.47
TUBA1C-205ENST00000549554 CEP152O94986 1710 aa30.47■■■□□ 2.47
TUBA1C-205ENST00000549554 ABCC3O15438 1527 aa30.47■■■□□ 2.47
TUBA1C-205ENST00000549554 DEPDC5O75140 1603 aa30.45■■■□□ 2.47
TUBA1C-205ENST00000549554 PRDM15P57071 1507 aaPredicted RBP30.45■■■□□ 2.47
TUBA1C-205ENST00000549554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.42■■■□□ 2.46
TUBA1C-205ENST00000549554 CAMSAP1Q5T5Y3 1602 aa30.41■■■□□ 2.46
TUBA1C-205ENST00000549554 CEP170BQ9Y4F5 1589 aaPredicted RBP30.41■■■□□ 2.46
TUBA1C-205ENST00000549554 STRCQ7RTU9 1775 aa30.38■■■□□ 2.45
TUBA1C-205ENST00000549554 KANK1Q14678 1352 aa30.38■■■□□ 2.45
TUBA1C-205ENST00000549554 TNRQ92752 1358 aa30.37■■■□□ 2.45
TUBA1C-205ENST00000549554 ANKRD50Q9ULJ7 1429 aa30.33■■■□□ 2.45
TUBA1C-205ENST00000549554 ROCK1Q13464 1354 aa30.33■■■□□ 2.45
TUBA1C-205ENST00000549554 FBXO31Q5XUX0 539 aaPredicted RBP30.33■■■□□ 2.45
TUBA1C-205ENST00000549554 A2ML1A8K2U0 1454 aa30.32■■■□□ 2.44
TUBA1C-205ENST00000549554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.32■■■□□ 2.44
TUBA1C-205ENST00000549554 DMRT2Q9Y5R5 561 aa30.32■■■□□ 2.44
TUBA1C-205ENST00000549554 RRBP1Q9P2E9 1410 aaKnown RBP30.31■■■□□ 2.44
TUBA1C-205ENST00000549554 SPATA31D1Q6ZQQ2 1576 aa30.31■■■□□ 2.44
TUBA1C-205ENST00000549554 CFAP65Q6ZU64 1925 aaKnown RBP30.31■■■□□ 2.44
TUBA1C-205ENST00000549554 NLRP1Q9C000 1473 aa30.28■■■□□ 2.44
TUBA1C-205ENST00000549554 ITGAEP38570 1179 aa30.28■■■□□ 2.44
TUBA1C-205ENST00000549554 VWDEQ8N2E2 1590 aa30.28■■■□□ 2.44
TUBA1C-205ENST00000549554 ERVK-7P63135 1459 aa30.27■■■□□ 2.44
TUBA1C-205ENST00000549554 ARHGAP31Q2M1Z3 1444 aa30.27■■■□□ 2.44
TUBA1C-205ENST00000549554 PLA2R1Q13018 1463 aa30.26■■■□□ 2.44
TUBA1C-205ENST00000549554 LMTK2Q8IWU2 1503 aa30.26■■■□□ 2.43
TUBA1C-205ENST00000549554 PTPRTO14522 1441 aa30.22■■■□□ 2.43
TUBA1C-205ENST00000549554 UNC13BO14795 1591 aa30.22■■■□□ 2.43
TUBA1C-205ENST00000549554 UGGT1Q9NYU2 1555 aa30.19■■■□□ 2.42
TUBA1C-205ENST00000549554 EFCAB6Q5THR3 1501 aa30.18■■■□□ 2.42
TUBA1C-205ENST00000549554 POLR1AO95602 1720 aaPredicted RBP30.18■■■□□ 2.42
TUBA1C-205ENST00000549554 PKD2Q13563 968 aa30.17■■■□□ 2.42
TUBA1C-205ENST00000549554 TET3O43151 1660 aa30.15■■■□□ 2.42
TUBA1C-205ENST00000549554 GCC2Q8IWJ2 1684 aa30.14■■■□□ 2.42
TUBA1C-205ENST00000549554 THEMISQ8N1K5 641 aaPredicted RBP30.13■■■□□ 2.41
TUBA1C-205ENST00000549554 NCKAP5LQ9HCH0 1330 aa30.11■■■□□ 2.41
TUBA1C-205ENST00000549554 RPRD2Q5VT52 1461 aaKnown RBP30.1■■■□□ 2.41
TUBA1C-205ENST00000549554 IQGAP3Q86VI3 1631 aa30.1■■■□□ 2.41
TUBA1C-205ENST00000549554 UBR1Q8IWV7 1749 aa30.1■■■□□ 2.41
TUBA1C-205ENST00000549554 PIK3C2BO00750 1634 aa30.04■■■□□ 2.4
TUBA1C-205ENST00000549554 SYNMO15061 1565 aa30.03■■■□□ 2.4
TUBA1C-205ENST00000549554 ANKLE2Q86XL3 938 aa30.03■■■□□ 2.4
TUBA1C-205ENST00000549554 KDM5AP29375 1690 aaKnown RBP30.03■■■□□ 2.4
TUBA1C-205ENST00000549554 NOS1P29475 1434 aa30.03■■■□□ 2.4
TUBA1C-205ENST00000549554 NEURL4Q96JN8 1562 aa30.02■■■□□ 2.4
TUBA1C-205ENST00000549554 E9PCH4 1651 aa30■■■□□ 2.39
TUBA1C-205ENST00000549554 NUP155O75694 1391 aa30■■■□□ 2.39
TUBA1C-205ENST00000549554 NAIPQ13075 1403 aa29.99■■■□□ 2.39
TUBA1C-205ENST00000549554 CERKQ8TCT0 537 aa29.98■■■□□ 2.39
TUBA1C-205ENST00000549554 ILDR1Q86SU0 546 aaPredicted RBP29.97■■■□□ 2.39
TUBA1C-205ENST00000549554 STAG3Q9UJ98 1225 aa29.96■■■□□ 2.39
TUBA1C-205ENST00000549554 HFM1A2PYH4 1435 aa29.96■■■□□ 2.39
TUBA1C-205ENST00000549554 MED14O60244 1454 aa29.94■■■□□ 2.38
TUBA1C-205ENST00000549554 FBXO41Q8TF61 875 aa29.94■■■□□ 2.38
TUBA1C-205ENST00000549554 SLIT1O75093 1534 aa29.94■■■□□ 2.38
TUBA1C-205ENST00000549554 IQGAP1P46940 1657 aa29.94■■■□□ 2.38
TUBA1C-205ENST00000549554 SLC52A1Q9NWF4 448 aa29.93■■■□□ 2.38
TUBA1C-205ENST00000549554 LTBP4Q8N2S1 1624 aa29.93■■■□□ 2.38
TUBA1C-205ENST00000549554 ADGRB3O60242 1522 aa29.92■■■□□ 2.38
TUBA1C-205ENST00000549554 NPHP4O75161 1426 aaPredicted RBP29.92■■■□□ 2.38
TUBA1C-205ENST00000549554 IDI1Q13907 227 aa29.91■■■□□ 2.38
TUBA1C-205ENST00000549554 ARHGAP23Q9P227 1491 aa29.91■■■□□ 2.38
TUBA1C-205ENST00000549554 SCAF11Q99590 1463 aaKnown RBP29.9■■■□□ 2.38
TUBA1C-205ENST00000549554 EID1Q9Y6B2 187 aa29.86■■■□□ 2.37
TUBA1C-205ENST00000549554 ZNF335Q9H4Z2 1342 aaPredicted RBP29.86■■■□□ 2.37
TUBA1C-205ENST00000549554 TMEM2Q9UHN6 1383 aa29.85■■■□□ 2.37
TUBA1C-205ENST00000549554 SPHKAPQ2M3C7 1700 aa29.85■■■□□ 2.37
TUBA1C-205ENST00000549554 MYO5BQ9ULV0 1848 aa29.85■■■□□ 2.37
TUBA1C-205ENST00000549554 IQSEC2Q5JU85 1478 aa29.84■■■□□ 2.37
TUBA1C-205ENST00000549554 TXNDC2Q86VQ3 553 aa29.83■■■□□ 2.37
TUBA1C-205ENST00000549554 TMEM131LA2VDJ0 1609 aa29.8■■■□□ 2.36
TUBA1C-205ENST00000549554 TRIM52Q96A61 297 aa29.78■■■□□ 2.36
TUBA1C-205ENST00000549554 CPS1P31327 1500 aa29.77■■■□□ 2.36
TUBA1C-205ENST00000549554 LTKP29376 864 aa29.77■■■□□ 2.36
TUBA1C-205ENST00000549554 CHGAP10645 457 aaKnown RBP29.72■■■□□ 2.35
TUBA1C-205ENST00000549554 HDGFP51858 240 aaKnown RBP29.7■■■□□ 2.35
TUBA1C-205ENST00000549554 TRPM2O94759 1503 aa29.69■■■□□ 2.34
TUBA1C-205ENST00000549554 RIMS2Q9UQ26 1411 aa29.68■■■□□ 2.34
TUBA1C-205ENST00000549554 ACIN1Q9UKV3 1341 aaKnown RBP29.68■■■□□ 2.34
TUBA1C-205ENST00000549554 SLC4A1APQ9BWU0 796 aaKnown RBP29.67■■■□□ 2.34
TUBA1C-205ENST00000549554 ZFYVE9O95405 1425 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms