RNA–Protein interactions for RNA: ENST00000549349.5

CALCOCO1-213, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-213ENST00000549349 RIMS1Q86UR5 1692 aaKnown RBP14.39□□□□□ -0.11
CALCOCO1-213ENST00000549349 MROH1Q8NDA8 1641 aa14.38□□□□□ -0.11
CALCOCO1-213ENST00000549349 MADDQ8WXG6 1647 aa14.38□□□□□ -0.11
CALCOCO1-213ENST00000549349 RNF17Q9BXT8 1623 aaKnown RBP14.38□□□□□ -0.11
CALCOCO1-213ENST00000549349 ERBINQ96RT1 1412 aa14.38□□□□□ -0.11
CALCOCO1-213ENST00000549349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.37□□□□□ -0.113e-6■□□□□ 8.2
CALCOCO1-213ENST00000549349 HFM1A2PYH4 1435 aa14.37□□□□□ -0.11
CALCOCO1-213ENST00000549349 DEPDC5O75140 1603 aa14.37□□□□□ -0.11
CALCOCO1-213ENST00000549349 KDM4FA0A1W2PPD8 638 aa14.36□□□□□ -0.11
CALCOCO1-213ENST00000549349 PCGF6Q9BYE7 350 aa14.34□□□□□ -0.11
CALCOCO1-213ENST00000549349 UNC13BO14795 1591 aa14.34□□□□□ -0.11
CALCOCO1-213ENST00000549349 SETD5Q9C0A6 1442 aa14.33□□□□□ -0.11
CALCOCO1-213ENST00000549349 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
CALCOCO1-213ENST00000549349 C3P01024 1663 aa14.32□□□□□ -0.12
CALCOCO1-213ENST00000549349 RAB3GAP2Q9H2M9 1393 aa14.32□□□□□ -0.12
CALCOCO1-213ENST00000549349 PRDM15P57071 1507 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO1-213ENST00000549349 CAMSAP1Q5T5Y3 1602 aa14.3□□□□□ -0.12
CALCOCO1-213ENST00000549349 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
CALCOCO1-213ENST00000549349 ABCC3O15438 1527 aa14.29□□□□□ -0.12
CALCOCO1-213ENST00000549349 VWDEQ8N2E2 1590 aa14.29□□□□□ -0.12
CALCOCO1-213ENST00000549349 IQGAP3Q86VI3 1631 aa14.29□□□□□ -0.12
CALCOCO1-213ENST00000549349 MROH2AA6NES4 1674 aa14.29□□□□□ -0.12
CALCOCO1-213ENST00000549349 ZC3H13Q5T200 1668 aaKnown RBP14.29□□□□□ -0.12
CALCOCO1-213ENST00000549349 CEBPAP49715 358 aaPredicted RBP14.28□□□□□ -0.12
CALCOCO1-213ENST00000549349 KDM5DQ9BY66 1539 aa14.28□□□□□ -0.12
CALCOCO1-213ENST00000549349 WASHC2CQ9Y4E1 1318 aa14.28□□□□□ -0.12
CALCOCO1-213ENST00000549349 NUP155O75694 1391 aa14.27□□□□□ -0.12
CALCOCO1-213ENST00000549349 ESF1Q9H501 851 aaKnown RBP14.27□□□□□ -0.13
CALCOCO1-213ENST00000549349 E9PCH4 1651 aa14.26□□□□□ -0.13
CALCOCO1-213ENST00000549349 SETD1BQ9UPS6 1966 aaKnown RBP14.26□□□□□ -0.13
CALCOCO1-213ENST00000549349 TET3O43151 1660 aa14.26□□□□□ -0.13
CALCOCO1-213ENST00000549349 KANK1Q14678 1352 aa14.25□□□□□ -0.13
CALCOCO1-213ENST00000549349 FAM135AQ9P2D6 1515 aa14.25□□□□□ -0.13
CALCOCO1-213ENST00000549349 PTPRMP28827 1452 aa14.25□□□□□ -0.13
CALCOCO1-213ENST00000549349 ZMYM3Q14202 1370 aa14.24□□□□□ -0.13
CALCOCO1-213ENST00000549349 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
CALCOCO1-213ENST00000549349 PZPP20742 1482 aa14.24□□□□□ -0.13
CALCOCO1-213ENST00000549349 PREX1Q8TCU6 1659 aa14.23□□□□□ -0.13
CALCOCO1-213ENST00000549349 LMTK2Q8IWU2 1503 aa14.22□□□□□ -0.13
CALCOCO1-213ENST00000549349 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
CALCOCO1-213ENST00000549349 CNTLNQ9NXG0 1405 aa14.22□□□□□ -0.13
CALCOCO1-213ENST00000549349 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
CALCOCO1-213ENST00000549349 FOXD1Q16676 465 aa14.2□□□□□ -0.14
CALCOCO1-213ENST00000549349 SPHKAPQ2M3C7 1700 aa14.19□□□□□ -0.14
CALCOCO1-213ENST00000549349 NPATQ14207 1427 aa14.19□□□□□ -0.14
CALCOCO1-213ENST00000549349 MPHOSPH9Q99550 1183 aa14.19□□□□□ -0.14
CALCOCO1-213ENST00000549349 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
CALCOCO1-213ENST00000549349 MYO5BQ9ULV0 1848 aa14.19□□□□□ -0.14
CALCOCO1-213ENST00000549349 HRCP23327 699 aa14.18□□□□□ -0.14
CALCOCO1-213ENST00000549349 PKD2Q13563 968 aa14.17□□□□□ -0.14
CALCOCO1-213ENST00000549349 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
CALCOCO1-213ENST00000549349 SYNMO15061 1565 aa14.15□□□□□ -0.14
CALCOCO1-213ENST00000549349 ERVK-7P63135 1459 aa14.15□□□□□ -0.14
CALCOCO1-213ENST00000549349 SPATA31D1Q6ZQQ2 1576 aa14.14□□□□□ -0.15
CALCOCO1-213ENST00000549349 UGGT1Q9NYU2 1555 aa14.13□□□□□ -0.15
CALCOCO1-213ENST00000549349 MYO3AQ8NEV4 1616 aa14.12□□□□□ -0.15
CALCOCO1-213ENST00000549349 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
CALCOCO1-213ENST00000549349 KIF1BO60333 1816 aa14.11□□□□□ -0.15
CALCOCO1-213ENST00000549349 NOS1P29475 1434 aa14.11□□□□□ -0.15
CALCOCO1-213ENST00000549349 TNRQ92752 1358 aa14.1□□□□□ -0.15
CALCOCO1-213ENST00000549349 PIK3C2BO00750 1634 aa14.1□□□□□ -0.15
CALCOCO1-213ENST00000549349 CLTCL1P53675 1640 aa14.1□□□□□ -0.15
CALCOCO1-213ENST00000549349 PLA2R1Q13018 1463 aa14.1□□□□□ -0.15
CALCOCO1-213ENST00000549349 ACIN1Q9UKV3 1341 aaKnown RBP14.1□□□□□ -0.15
CALCOCO1-213ENST00000549349 DHX57Q6P158 1386 aaKnown RBP14.09□□□□□ -0.15
CALCOCO1-213ENST00000549349 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
CALCOCO1-213ENST00000549349 UBR1Q8IWV7 1749 aa14.08□□□□□ -0.16
CALCOCO1-213ENST00000549349 ZNF142P52746 1687 aaPredicted RBP14.07□□□□□ -0.16
CALCOCO1-213ENST00000549349 PTPRTO14522 1441 aa14.07□□□□□ -0.16
CALCOCO1-213ENST00000549349 IDI1Q13907 227 aa14.07□□□□□ -0.16
CALCOCO1-213ENST00000549349 TRPM2O94759 1503 aa14.06□□□□□ -0.16
CALCOCO1-213ENST00000549349 CEP170BQ9Y4F5 1589 aaPredicted RBP14.05□□□□□ -0.16
CALCOCO1-213ENST00000549349 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
CALCOCO1-213ENST00000549349 ANKRD30BQ9BXX2 1392 aa14.04□□□□□ -0.16
CALCOCO1-213ENST00000549349 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
CALCOCO1-213ENST00000549349 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
CALCOCO1-213ENST00000549349 LMTK3Q96Q04 1460 aa14.03□□□□□ -0.16
CALCOCO1-213ENST00000549349 A2ML1A8K2U0 1454 aa14.02□□□□□ -0.16
CALCOCO1-213ENST00000549349 NLRP1Q9C000 1473 aa14.02□□□□□ -0.16
CALCOCO1-213ENST00000549349 HSPA2P54652 639 aa14.02□□□□□ -0.17
CALCOCO1-213ENST00000549349 SIN3AQ96ST3 1273 aa14.01□□□□□ -0.17
CALCOCO1-213ENST00000549349 SLC52A1Q9NWF4 448 aa14.01□□□□□ -0.17
CALCOCO1-213ENST00000549349 ADGRB3O60242 1522 aa14□□□□□ -0.17
CALCOCO1-213ENST00000549349 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
CALCOCO1-213ENST00000549349 STRCQ7RTU9 1775 aa14□□□□□ -0.17
CALCOCO1-213ENST00000549349 KDM5AP29375 1690 aaKnown RBP14□□□□□ -0.17
CALCOCO1-213ENST00000549349 CCDC144AA2RUR9 1427 aa13.99□□□□□ -0.17
CALCOCO1-213ENST00000549349 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
CALCOCO1-213ENST00000549349 PPLO60437 1756 aa13.98□□□□□ -0.17
CALCOCO1-213ENST00000549349 NEUROD1Q13562 356 aa13.97□□□□□ -0.17
CALCOCO1-213ENST00000549349 RGL3Q3MIN7 710 aa13.97□□□□□ -0.17
CALCOCO1-213ENST00000549349 IFT172Q9UG01 1749 aa13.97□□□□□ -0.17
CALCOCO1-213ENST00000549349 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-213ENST00000549349 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-213ENST00000549349 ZNF326Q5BKZ1 582 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-213ENST00000549349 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-213ENST00000549349 CCER1Q8TC90 406 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-213ENST00000549349 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
CALCOCO1-213ENST00000549349 SPATA31E1Q6ZUB1 1445 aa13.93□□□□□ -0.18
CALCOCO1-213ENST00000549349 LTKP29376 864 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms