RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 PTPN23Q9H3S7 1636 aa30.62■■■□□ 2.49
SLC48A1-207ENST00000549243 CEP170BQ9Y4F5 1589 aaPredicted RBP30.62■■■□□ 2.49
SLC48A1-207ENST00000549243 CERKQ8TCT0 537 aa30.61■■■□□ 2.49
SLC48A1-207ENST00000549243 WASHC2CQ9Y4E1 1318 aa30.6■■■□□ 2.49
SLC48A1-207ENST00000549243 CROCC2H7BZ55 1655 aa30.58■■■□□ 2.49
SLC48A1-207ENST00000549243 PTPRTO14522 1441 aa30.58■■■□□ 2.49
SLC48A1-207ENST00000549243 FAM135AQ9P2D6 1515 aa30.57■■■□□ 2.49
SLC48A1-207ENST00000549243 RNF17Q9BXT8 1623 aaKnown RBP30.57■■■□□ 2.48
SLC48A1-207ENST00000549243 FBXO31Q5XUX0 539 aaPredicted RBP30.56■■■□□ 2.48
SLC48A1-207ENST00000549243 EIF2AK4Q9P2K8 1649 aaKnown RBP30.55■■■□□ 2.48
SLC48A1-207ENST00000549243 PZPP20742 1482 aa30.54■■■□□ 2.48
SLC48A1-207ENST00000549243 FGD6Q6ZV73 1430 aa30.54■■■□□ 2.48
SLC48A1-207ENST00000549243 NCKAP5LQ9HCH0 1330 aa30.52■■■□□ 2.48
SLC48A1-207ENST00000549243 ABCC5O15440 1437 aa30.52■■■□□ 2.48
SLC48A1-207ENST00000549243 TNRQ92752 1358 aa30.51■■■□□ 2.47
SLC48A1-207ENST00000549243 DUOX2Q9NRD8 1548 aa30.5■■■□□ 2.47
SLC48A1-207ENST00000549243 DNMT1P26358 1616 aaKnown RBP30.5■■■□□ 2.47
SLC48A1-207ENST00000549243 A2ML1A8K2U0 1454 aa30.5■■■□□ 2.47
SLC48A1-207ENST00000549243 SHANK2Q9UPX8 1470 aa30.49■■■□□ 2.47
SLC48A1-207ENST00000549243 TCOF1Q13428 1488 aaKnown RBP30.48■■■□□ 2.47
SLC48A1-207ENST00000549243 ZC3H13Q5T200 1668 aaKnown RBP30.48■■■□□ 2.47
SLC48A1-207ENST00000549243 DAPK1P53355 1430 aa30.47■■■□□ 2.47
SLC48A1-207ENST00000549243 ABCC3O15438 1527 aa30.47■■■□□ 2.47
SLC48A1-207ENST00000549243 MROH1Q8NDA8 1641 aa30.47■■■□□ 2.47
SLC48A1-207ENST00000549243 CEP152O94986 1710 aa30.47■■■□□ 2.47
SLC48A1-207ENST00000549243 PLA2R1Q13018 1463 aa30.47■■■□□ 2.47
SLC48A1-207ENST00000549243 KIF15Q9NS87 1388 aa30.46■■■□□ 2.47
SLC48A1-207ENST00000549243 CFAP65Q6ZU64 1925 aaKnown RBP30.45■■■□□ 2.47
SLC48A1-207ENST00000549243 RRP7BPQ9NSQ0 103 aa30.45■■■□□ 2.47
SLC48A1-207ENST00000549243 LTBP4Q8N2S1 1624 aa30.41■■■□□ 2.46
SLC48A1-207ENST00000549243 PKD2Q13563 968 aa30.41■■■□□ 2.46
SLC48A1-207ENST00000549243 CHIC2Q9UKJ5 165 aa30.41■■■□□ 2.46
SLC48A1-207ENST00000549243 POLR1AO95602 1720 aaPredicted RBP30.38■■■□□ 2.45
SLC48A1-207ENST00000549243 ERBINQ96RT1 1412 aa30.38■■■□□ 2.45
SLC48A1-207ENST00000549243 FAM50AQ14320 339 aaKnown RBP30.35■■■□□ 2.45
SLC48A1-207ENST00000549243 PRDM15P57071 1507 aaPredicted RBP30.34■■■□□ 2.45
SLC48A1-207ENST00000549243 NLRP1Q9C000 1473 aa30.34■■■□□ 2.45
SLC48A1-207ENST00000549243 SPATA31D1Q6ZQQ2 1576 aa30.33■■■□□ 2.45
SLC48A1-207ENST00000549243 ANKRD30AQ9BXX3 1397 aa30.33■■■□□ 2.45
SLC48A1-207ENST00000549243 ZNF335Q9H4Z2 1342 aaPredicted RBP30.33■■■□□ 2.45
SLC48A1-207ENST00000549243 UGGT1Q9NYU2 1555 aa30.32■■■□□ 2.45
SLC48A1-207ENST00000549243 ERVK-7P63135 1459 aa30.32■■■□□ 2.44
SLC48A1-207ENST00000549243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.32■■■□□ 2.44
SLC48A1-207ENST00000549243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.3■■■□□ 2.44
SLC48A1-207ENST00000549243 DEPDC5O75140 1603 aa30.3■■■□□ 2.44
SLC48A1-207ENST00000549243 NEURL4Q96JN8 1562 aa30.29■■■□□ 2.44
SLC48A1-207ENST00000549243 THEMISQ8N1K5 641 aaPredicted RBP30.27■■■□□ 2.44
SLC48A1-207ENST00000549243 ANKLE2Q86XL3 938 aa30.23■■■□□ 2.43
SLC48A1-207ENST00000549243 ADGRL2O95490 1459 aa30.23■■■□□ 2.43
SLC48A1-207ENST00000549243 KANK1Q14678 1352 aa30.22■■■□□ 2.43
SLC48A1-207ENST00000549243 IQSEC2Q5JU85 1478 aa30.21■■■□□ 2.43
SLC48A1-207ENST00000549243 PPARGC1BQ86YN6 1023 aaKnown RBP30.2■■■□□ 2.43
SLC48A1-207ENST00000549243 ARHGAP31Q2M1Z3 1444 aa30.2■■■□□ 2.42
SLC48A1-207ENST00000549243 UBR1Q8IWV7 1749 aa30.19■■■□□ 2.42
SLC48A1-207ENST00000549243 VWDEQ8N2E2 1590 aa30.15■■■□□ 2.42
SLC48A1-207ENST00000549243 NPHP4O75161 1426 aaPredicted RBP30.14■■■□□ 2.42
SLC48A1-207ENST00000549243 IQGAP1P46940 1657 aa30.14■■■□□ 2.41
SLC48A1-207ENST00000549243 LMTK2Q8IWU2 1503 aa30.12■■■□□ 2.41
SLC48A1-207ENST00000549243 ANKRD50Q9ULJ7 1429 aa30.12■■■□□ 2.41
SLC48A1-207ENST00000549243 MED14O60244 1454 aa30.12■■■□□ 2.41
SLC48A1-207ENST00000549243 PIK3C2BO00750 1634 aa30.11■■■□□ 2.41
SLC48A1-207ENST00000549243 EFCAB6Q5THR3 1501 aa30.07■■■□□ 2.4
SLC48A1-207ENST00000549243 UBAP1LF5GYI3 381 aa30.05■■■□□ 2.4
SLC48A1-207ENST00000549243 ITGAEP38570 1179 aa30.04■■■□□ 2.4
SLC48A1-207ENST00000549243 CPS1P31327 1500 aa30.04■■■□□ 2.4
SLC48A1-207ENST00000549243 SYNMO15061 1565 aa30.03■■■□□ 2.4
SLC48A1-207ENST00000549243 SCAF11Q99590 1463 aaKnown RBP30.02■■■□□ 2.4
SLC48A1-207ENST00000549243 STAG3Q9UJ98 1225 aa30.01■■■□□ 2.39
SLC48A1-207ENST00000549243 SLIT1O75093 1534 aa30.01■■■□□ 2.39
SLC48A1-207ENST00000549243 ARHGAP23Q9P227 1491 aa30■■■□□ 2.39
SLC48A1-207ENST00000549243 LTKP29376 864 aa29.99■■■□□ 2.39
SLC48A1-207ENST00000549243 TXNDC2Q86VQ3 553 aa29.99■■■□□ 2.39
SLC48A1-207ENST00000549243 STRCP1A6NGW2 1772 aa29.99■■■□□ 2.39
SLC48A1-207ENST00000549243 TET3O43151 1660 aa29.98■■■□□ 2.39
SLC48A1-207ENST00000549243 IDI1Q13907 227 aa29.98■■■□□ 2.39
SLC48A1-207ENST00000549243 UNC13BO14795 1591 aa29.98■■■□□ 2.39
SLC48A1-207ENST00000549243 NOS1P29475 1434 aa29.97■■■□□ 2.39
SLC48A1-207ENST00000549243 ROCK1Q13464 1354 aa29.97■■■□□ 2.39
SLC48A1-207ENST00000549243 KDM5AP29375 1690 aaKnown RBP29.96■■■□□ 2.39
SLC48A1-207ENST00000549243 GCC2Q8IWJ2 1684 aa29.95■■■□□ 2.39
SLC48A1-207ENST00000549243 EID1Q9Y6B2 187 aa29.94■■■□□ 2.38
SLC48A1-207ENST00000549243 TMEM2Q9UHN6 1383 aa29.93■■■□□ 2.38
SLC48A1-207ENST00000549243 RPRD2Q5VT52 1461 aaKnown RBP29.92■■■□□ 2.38
SLC48A1-207ENST00000549243 ADGRB3O60242 1522 aa29.91■■■□□ 2.38
SLC48A1-207ENST00000549243 MYO5BQ9ULV0 1848 aa29.9■■■□□ 2.38
SLC48A1-207ENST00000549243 SCAF1Q9H7N4 1312 aaKnown RBP29.89■■■□□ 2.38
SLC48A1-207ENST00000549243 E9PCH4 1651 aa29.88■■■□□ 2.37
SLC48A1-207ENST00000549243 IQGAP3Q86VI3 1631 aa29.86■■■□□ 2.37
SLC48A1-207ENST00000549243 PIP4K2BP78356 416 aa29.86■■■□□ 2.37
SLC48A1-207ENST00000549243 SLC52A1Q9NWF4 448 aa29.86■■■□□ 2.37
SLC48A1-207ENST00000549243 LRRC7Q96NW7 1537 aa29.85■■■□□ 2.37
SLC48A1-207ENST00000549243 TOM1O60784 492 aa29.84■■■□□ 2.37
SLC48A1-207ENST00000549243 NUP155O75694 1391 aa29.81■■■□□ 2.36
SLC48A1-207ENST00000549243 DISP3Q9P2K9 1392 aa29.81■■■□□ 2.36
SLC48A1-207ENST00000549243 RRBP1Q9P2E9 1410 aaKnown RBP29.79■■■□□ 2.36
SLC48A1-207ENST00000549243 ALKQ9UM73 1620 aa29.78■■■□□ 2.36
SLC48A1-207ENST00000549243 SENP3Q9H4L4 574 aaPredicted RBP29.77■■■□□ 2.36
SLC48A1-207ENST00000549243 TMEM131LA2VDJ0 1609 aa29.77■■■□□ 2.36
SLC48A1-207ENST00000549243 XIRP1Q702N8 1843 aaKnown RBP29.76■■■□□ 2.35
SLC48A1-207ENST00000549243 SLC26A8Q96RN1 970 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms