RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 TRAPPC8Q9Y2L5 1435 aa18.43■□□□□ 0.54
SMPDL3B-206ENST00000549094 TSPY4P0CV99 314 aa18.42■□□□□ 0.54
SMPDL3B-206ENST00000549094 TSPY10P0CW01 314 aa18.42■□□□□ 0.54
SMPDL3B-206ENST00000549094 MAGI2Q86UL8 1455 aa18.42■□□□□ 0.54
SMPDL3B-206ENST00000549094 ERICH6Q7L0X2 663 aa18.41■□□□□ 0.54
SMPDL3B-206ENST00000549094 AFAP1Q8N556 730 aa18.41■□□□□ 0.54
SMPDL3B-206ENST00000549094 ZNF518AQ6AHZ1 1483 aa18.41■□□□□ 0.54
SMPDL3B-206ENST00000549094 ZBED9Q6R2W3 1325 aa18.41■□□□□ 0.54
SMPDL3B-206ENST00000549094 RRP7BPQ9NSQ0 103 aa18.41■□□□□ 0.54
SMPDL3B-206ENST00000549094 MYT1LQ9UL68 1186 aa18.41■□□□□ 0.54
SMPDL3B-206ENST00000549094 CROCC2H7BZ55 1655 aa18.39■□□□□ 0.53
SMPDL3B-206ENST00000549094 MPHOSPH9Q99550 1183 aa18.38■□□□□ 0.53
SMPDL3B-206ENST00000549094 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
SMPDL3B-206ENST00000549094 KDM5CP41229 1560 aa18.38■□□□□ 0.53
SMPDL3B-206ENST00000549094 ZFYVE16Q7Z3T8 1539 aa18.38■□□□□ 0.53
SMPDL3B-206ENST00000549094 SHANK2Q9UPX8 1470 aa18.38■□□□□ 0.53
SMPDL3B-206ENST00000549094 ADGBQ8N7X0 1667 aa18.38■□□□□ 0.53
SMPDL3B-206ENST00000549094 SPAG9O60271 1321 aaKnown RBP18.38■□□□□ 0.53
SMPDL3B-206ENST00000549094 CHIC2Q9UKJ5 165 aa18.37■□□□□ 0.53
SMPDL3B-206ENST00000549094 C9orf84Q5VXU9 1444 aa18.37■□□□□ 0.53
SMPDL3B-206ENST00000549094 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
SMPDL3B-206ENST00000549094 ANKRD30BQ9BXX2 1392 aa18.36■□□□□ 0.53
SMPDL3B-206ENST00000549094 MAST1Q9Y2H9 1570 aa18.35■□□□□ 0.53
SMPDL3B-206ENST00000549094 BCORL1Q5H9F3 1711 aa18.34■□□□□ 0.53
SMPDL3B-206ENST00000549094 HECW2Q9P2P5 1572 aa18.34■□□□□ 0.53
SMPDL3B-206ENST00000549094 RTEL1-TNFRSF6BF6WH68 1400 aa18.34■□□□□ 0.53
SMPDL3B-206ENST00000549094 L3MBTL2Q969R5 705 aa18.34■□□□□ 0.53
SMPDL3B-206ENST00000549094 ADAMTSL3P82987 1691 aa18.33■□□□□ 0.52
SMPDL3B-206ENST00000549094 MSH5O43196 834 aa18.32■□□□□ 0.52
SMPDL3B-206ENST00000549094 MRS2Q9HD23 443 aa18.32■□□□□ 0.52
SMPDL3B-206ENST00000549094 ANKRD30AQ9BXX3 1397 aa18.32■□□□□ 0.52
SMPDL3B-206ENST00000549094 MLH3Q9UHC1 1453 aa18.32■□□□□ 0.52
SMPDL3B-206ENST00000549094 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
SMPDL3B-206ENST00000549094 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
SMPDL3B-206ENST00000549094 ADGRL2O95490 1459 aa18.31■□□□□ 0.52
SMPDL3B-206ENST00000549094 INO80Q9ULG1 1556 aaPredicted RBP18.31■□□□□ 0.52
SMPDL3B-206ENST00000549094 YEATS2Q9ULM3 1422 aa18.3■□□□□ 0.52
SMPDL3B-206ENST00000549094 IRX6P78412 446 aaPredicted RBP18.29■□□□□ 0.52
SMPDL3B-206ENST00000549094 KIDINS220Q9ULH0 1771 aa18.29■□□□□ 0.52
SMPDL3B-206ENST00000549094 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
SMPDL3B-206ENST00000549094 PLXNC1O60486 1568 aa18.27■□□□□ 0.52
SMPDL3B-206ENST00000549094 SIGLEC1Q9BZZ2 1709 aa18.27■□□□□ 0.52
SMPDL3B-206ENST00000549094 REREQ9P2R6 1566 aa18.27■□□□□ 0.52
SMPDL3B-206ENST00000549094 ATP10AO60312 1499 aa18.26■□□□□ 0.51
SMPDL3B-206ENST00000549094 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
SMPDL3B-206ENST00000549094 KIF7Q2M1P5 1343 aa18.26■□□□□ 0.51
SMPDL3B-206ENST00000549094 DIP2CQ9Y2E4 1556 aa18.25■□□□□ 0.51
SMPDL3B-206ENST00000549094 ARID4BQ4LE39 1312 aaPredicted RBP18.25■□□□□ 0.51
SMPDL3B-206ENST00000549094 ABCA6Q8N139 1617 aa18.25■□□□□ 0.51
SMPDL3B-206ENST00000549094 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
SMPDL3B-206ENST00000549094 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
SMPDL3B-206ENST00000549094 PZPP20742 1482 aa18.22■□□□□ 0.51
SMPDL3B-206ENST00000549094 DUOX2Q9NRD8 1548 aa18.22■□□□□ 0.51
SMPDL3B-206ENST00000549094 C11orf95C9JLR9 678 aaPredicted RBP18.21■□□□□ 0.51
SMPDL3B-206ENST00000549094 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
SMPDL3B-206ENST00000549094 ROCK2O75116 1388 aaKnown RBP18.21■□□□□ 0.51
SMPDL3B-206ENST00000549094 FER1L4A9Z1Z3 1794 aa18.2■□□□□ 0.5
SMPDL3B-206ENST00000549094 NBPF8Q3BBV2 869 aa18.2■□□□□ 0.5
SMPDL3B-206ENST00000549094 ANKRD50Q9ULJ7 1429 aa18.2■□□□□ 0.5
SMPDL3B-206ENST00000549094 SLC4A1APQ9BWU0 796 aaKnown RBP18.2■□□□□ 0.5
SMPDL3B-206ENST00000549094 RIMS1Q86UR5 1692 aaKnown RBP18.19■□□□□ 0.5
SMPDL3B-206ENST00000549094 A2MP01023 1474 aa18.19■□□□□ 0.5
SMPDL3B-206ENST00000549094 DHX29Q7Z478 1369 aaKnown RBP18.19■□□□□ 0.5
SMPDL3B-206ENST00000549094 PTPRMP28827 1452 aa18.18■□□□□ 0.5
SMPDL3B-206ENST00000549094 AGLP35573 1532 aa18.18■□□□□ 0.5
SMPDL3B-206ENST00000549094 ERBINQ96RT1 1412 aa18.17■□□□□ 0.5
SMPDL3B-206ENST00000549094 NUDCQ9Y266 331 aa18.16■□□□□ 0.5
SMPDL3B-206ENST00000549094 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
SMPDL3B-206ENST00000549094 FOXD1Q16676 465 aa18.16■□□□□ 0.5
SMPDL3B-206ENST00000549094 USP47Q96K76 1375 aa18.15■□□□□ 0.5
SMPDL3B-206ENST00000549094 RNF123Q5XPI4 1314 aa18.14■□□□□ 0.49
SMPDL3B-206ENST00000549094 UHRF1BP1Q6BDS2 1440 aa18.14■□□□□ 0.49
SMPDL3B-206ENST00000549094 B4GALNT3Q6L9W6 998 aa18.14■□□□□ 0.49
SMPDL3B-206ENST00000549094 KTN1Q86UP2 1357 aaKnown RBP18.14■□□□□ 0.49
SMPDL3B-206ENST00000549094 KDM5DQ9BY66 1539 aa18.12■□□□□ 0.49
SMPDL3B-206ENST00000549094 EIF2AK4Q9P2K8 1649 aaKnown RBP18.12■□□□□ 0.49
SMPDL3B-206ENST00000549094 KIF3BO15066 747 aa18.12■□□□□ 0.49
SMPDL3B-206ENST00000549094 E9PCH4 1651 aa18.1■□□□□ 0.49
SMPDL3B-206ENST00000549094 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
SMPDL3B-206ENST00000549094 MLECQ14165 292 aa18.05■□□□□ 0.48
SMPDL3B-206ENST00000549094 ANP32AP39687 249 aaKnown RBP18.05■□□□□ 0.48
SMPDL3B-206ENST00000549094 GGT6Q6P531 493 aa18.05■□□□□ 0.48
SMPDL3B-206ENST00000549094 CCDC136Q96JN2 1154 aa18.05■□□□□ 0.48
SMPDL3B-206ENST00000549094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.05■□□□□ 0.48
SMPDL3B-206ENST00000549094 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
SMPDL3B-206ENST00000549094 BRD4O60885 1362 aaPredicted RBP18.04■□□□□ 0.48
SMPDL3B-206ENST00000549094 UNC13BO14795 1591 aa18.04■□□□□ 0.48
SMPDL3B-206ENST00000549094 DEPDC5O75140 1603 aa18.04■□□□□ 0.48
SMPDL3B-206ENST00000549094 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
SMPDL3B-206ENST00000549094 NUP155O75694 1391 aa18.03■□□□□ 0.48
SMPDL3B-206ENST00000549094 KANK1Q14678 1352 aa18.03■□□□□ 0.48
SMPDL3B-206ENST00000549094 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.48
SMPDL3B-206ENST00000549094 LRPPRCP42704 1394 aaKnown RBP18.01■□□□□ 0.47
SMPDL3B-206ENST00000549094 C3P01024 1663 aa18.01■□□□□ 0.47
SMPDL3B-206ENST00000549094 PRDM15P57071 1507 aaPredicted RBP18.01■□□□□ 0.47
SMPDL3B-206ENST00000549094 MROH1Q8NDA8 1641 aa18■□□□□ 0.47
SMPDL3B-206ENST00000549094 PREX1Q8TCU6 1659 aa18■□□□□ 0.47
SMPDL3B-206ENST00000549094 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
SMPDL3B-206ENST00000549094 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
SMPDL3B-206ENST00000549094 PKD2Q13563 968 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms