RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 MLECQ14165 292 aa31.64■■■□□ 2.66
CACNB3-210ENST00000548874 PRDM15P57071 1507 aaPredicted RBP31.64■■■□□ 2.66
CACNB3-210ENST00000548874 GGT6Q6P531 493 aa31.63■■■□□ 2.65
CACNB3-210ENST00000548874 UNC13BO14795 1591 aa31.63■■■□□ 2.65
CACNB3-210ENST00000548874 PPP6R1Q9UPN7 881 aa31.6■■■□□ 2.65
CACNB3-210ENST00000548874 FAM135AQ9P2D6 1515 aa31.59■■■□□ 2.65
CACNB3-210ENST00000548874 KDM5DQ9BY66 1539 aa31.58■■■□□ 2.65
CACNB3-210ENST00000548874 VWDEQ8N2E2 1590 aa31.57■■■□□ 2.64
CACNB3-210ENST00000548874 MADDQ8WXG6 1647 aa31.57■■■□□ 2.64
CACNB3-210ENST00000548874 RAB3GAP2Q9H2M9 1393 aa31.56■■■□□ 2.64
CACNB3-210ENST00000548874 FER1L4A9Z1Z3 1794 aa31.55■■■□□ 2.64
CACNB3-210ENST00000548874 ABCC3O15438 1527 aa31.52■■■□□ 2.64
CACNB3-210ENST00000548874 ZC3H13Q5T200 1668 aaKnown RBP31.51■■■□□ 2.64
CACNB3-210ENST00000548874 CNTLNQ9NXG0 1405 aa31.51■■■□□ 2.64
CACNB3-210ENST00000548874 KDM4FA0A1W2PPD8 638 aa31.51■■■□□ 2.63
CACNB3-210ENST00000548874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.51■■■□□ 2.63
CACNB3-210ENST00000548874 KANK1Q14678 1352 aa31.51■■■□□ 2.63
CACNB3-210ENST00000548874 HRCP23327 699 aa31.49■■■□□ 2.63
CACNB3-210ENST00000548874 IQGAP3Q86VI3 1631 aa31.49■■■□□ 2.63
CACNB3-210ENST00000548874 LMTK2Q8IWU2 1503 aa31.49■■■□□ 2.63
CACNB3-210ENST00000548874 CLTCQ00610 1675 aaKnown RBP31.48■■■□□ 2.63
CACNB3-210ENST00000548874 WASHC2CQ9Y4E1 1318 aa31.48■■■□□ 2.63
CACNB3-210ENST00000548874 NUP155O75694 1391 aa31.47■■■□□ 2.63
CACNB3-210ENST00000548874 PCGF6Q9BYE7 350 aa31.47■■■□□ 2.63
CACNB3-210ENST00000548874 RIMS1Q86UR5 1692 aaKnown RBP31.47■■■□□ 2.63
CACNB3-210ENST00000548874 ACIN1Q9UKV3 1341 aaKnown RBP31.47■■■□□ 2.63
CACNB3-210ENST00000548874 CEP152O94986 1710 aa31.46■■■□□ 2.63
CACNB3-210ENST00000548874 MROH2AA6NES4 1674 aa31.46■■■□□ 2.63
CACNB3-210ENST00000548874 ESF1Q9H501 851 aaKnown RBP31.45■■■□□ 2.63
CACNB3-210ENST00000548874 CAMSAP1Q5T5Y3 1602 aa31.41■■■□□ 2.62
CACNB3-210ENST00000548874 TRIM52Q96A61 297 aa31.4■■■□□ 2.62
CACNB3-210ENST00000548874 PZPP20742 1482 aa31.4■■■□□ 2.62
CACNB3-210ENST00000548874 TET3O43151 1660 aa31.39■■■□□ 2.62
CACNB3-210ENST00000548874 ZMYM3Q14202 1370 aa31.39■■■□□ 2.62
CACNB3-210ENST00000548874 PTPRMP28827 1452 aa31.39■■■□□ 2.62
CACNB3-210ENST00000548874 EFCAB6Q5THR3 1501 aa31.38■■■□□ 2.61
CACNB3-210ENST00000548874 ARHGAP31Q2M1Z3 1444 aa31.37■■■□□ 2.61
CACNB3-210ENST00000548874 C3P01024 1663 aa31.35■■■□□ 2.61
CACNB3-210ENST00000548874 NPATQ14207 1427 aa31.32■■■□□ 2.61
CACNB3-210ENST00000548874 RPRD2Q5VT52 1461 aaKnown RBP31.29■■■□□ 2.6
CACNB3-210ENST00000548874 CEBPAP49715 358 aaPredicted RBP31.29■■■□□ 2.6
CACNB3-210ENST00000548874 E9PCH4 1651 aa31.29■■■□□ 2.6
CACNB3-210ENST00000548874 SLC4A1APQ9BWU0 796 aaKnown RBP31.27■■■□□ 2.6
CACNB3-210ENST00000548874 MPHOSPH9Q99550 1183 aa31.26■■■□□ 2.59
CACNB3-210ENST00000548874 ERVK-7P63135 1459 aa31.23■■■□□ 2.59
CACNB3-210ENST00000548874 SPATA31D1Q6ZQQ2 1576 aa31.22■■■□□ 2.59
CACNB3-210ENST00000548874 PKD2Q13563 968 aa31.22■■■□□ 2.59
CACNB3-210ENST00000548874 PREX1Q8TCU6 1659 aa31.22■■■□□ 2.59
CACNB3-210ENST00000548874 FBXO31Q5XUX0 539 aaPredicted RBP31.21■■■□□ 2.59
CACNB3-210ENST00000548874 NOS1P29475 1434 aa31.2■■■□□ 2.59
CACNB3-210ENST00000548874 PLPPR3Q6T4P5 718 aa31.18■■■□□ 2.58
CACNB3-210ENST00000548874 PTPRTO14522 1441 aa31.15■■■□□ 2.58
CACNB3-210ENST00000548874 CFAP65Q6ZU64 1925 aaKnown RBP31.14■■■□□ 2.57
CACNB3-210ENST00000548874 TNRQ92752 1358 aa31.13■■■□□ 2.57
CACNB3-210ENST00000548874 SYNMO15061 1565 aa31.13■■■□□ 2.57
CACNB3-210ENST00000548874 SPHKAPQ2M3C7 1700 aa31.11■■■□□ 2.57
CACNB3-210ENST00000548874 PLA2R1Q13018 1463 aa31.1■■■□□ 2.57
CACNB3-210ENST00000548874 FOXD1Q16676 465 aa31.1■■■□□ 2.57
CACNB3-210ENST00000548874 DHX57Q6P158 1386 aaKnown RBP31.09■■■□□ 2.57
CACNB3-210ENST00000548874 SETD1BQ9UPS6 1966 aaKnown RBP31.09■■■□□ 2.57
CACNB3-210ENST00000548874 TRPM2O94759 1503 aa31.08■■■□□ 2.57
CACNB3-210ENST00000548874 MYO3AQ8NEV4 1616 aa31.06■■■□□ 2.56
CACNB3-210ENST00000548874 NLRP1Q9C000 1473 aa31.04■■■□□ 2.56
CACNB3-210ENST00000548874 PIK3C2BO00750 1634 aa31.04■■■□□ 2.56
CACNB3-210ENST00000548874 SLC52A1Q9NWF4 448 aa31.01■■■□□ 2.55
CACNB3-210ENST00000548874 ANKRD30BQ9BXX2 1392 aa31.01■■■□□ 2.55
CACNB3-210ENST00000548874 UGGT1Q9NYU2 1555 aa31■■■□□ 2.55
CACNB3-210ENST00000548874 UHRF1BP1Q6BDS2 1440 aa30.99■■■□□ 2.55
CACNB3-210ENST00000548874 ZNF142P52746 1687 aaPredicted RBP30.99■■■□□ 2.55
CACNB3-210ENST00000548874 A2ML1A8K2U0 1454 aa30.97■■■□□ 2.55
CACNB3-210ENST00000548874 IDI1Q13907 227 aa30.97■■■□□ 2.55
CACNB3-210ENST00000548874 CLTCL1P53675 1640 aa30.97■■■□□ 2.55
CACNB3-210ENST00000548874 CEP170BQ9Y4F5 1589 aaPredicted RBP30.96■■■□□ 2.55
CACNB3-210ENST00000548874 CCDC144AA2RUR9 1427 aa30.92■■■□□ 2.54
CACNB3-210ENST00000548874 LMTK3Q96Q04 1460 aa30.92■■■□□ 2.54
CACNB3-210ENST00000548874 KDM5AP29375 1690 aaKnown RBP30.9■■■□□ 2.54
CACNB3-210ENST00000548874 ADGRB3O60242 1522 aa30.89■■■□□ 2.54
CACNB3-210ENST00000548874 AEBP2Q6ZN18 517 aaPredicted RBP30.89■■■□□ 2.54
CACNB3-210ENST00000548874 UBR1Q8IWV7 1749 aa30.89■■■□□ 2.54
CACNB3-210ENST00000548874 TMEM131LA2VDJ0 1609 aa30.87■■■□□ 2.53
CACNB3-210ENST00000548874 KIF1BO60333 1816 aa30.82■■■□□ 2.52
CACNB3-210ENST00000548874 NEURL4Q96JN8 1562 aa30.8■■■□□ 2.52
CACNB3-210ENST00000548874 SPATA31E1Q6ZUB1 1445 aa30.8■■■□□ 2.52
CACNB3-210ENST00000548874 THEMISQ8N1K5 641 aaPredicted RBP30.79■■■□□ 2.52
CACNB3-210ENST00000548874 STAG3Q9UJ98 1225 aa30.79■■■□□ 2.52
CACNB3-210ENST00000548874 MYO5BQ9ULV0 1848 aa30.79■■■□□ 2.52
CACNB3-210ENST00000548874 CHGAP10645 457 aaKnown RBP30.77■■■□□ 2.52
CACNB3-210ENST00000548874 CLSPNQ9HAW4 1339 aa30.76■■■□□ 2.52
CACNB3-210ENST00000548874 SLIT1O75093 1534 aa30.76■■■□□ 2.51
CACNB3-210ENST00000548874 ARHGAP23Q9P227 1491 aa30.76■■■□□ 2.51
CACNB3-210ENST00000548874 TMEM2Q9UHN6 1383 aa30.74■■■□□ 2.51
CACNB3-210ENST00000548874 HSPA2P54652 639 aa30.73■■■□□ 2.51
CACNB3-210ENST00000548874 CCER1Q8TC90 406 aaPredicted RBP30.72■■■□□ 2.51
CACNB3-210ENST00000548874 SIN3AQ96ST3 1273 aa30.72■■■□□ 2.51
CACNB3-210ENST00000548874 ZFYVE9O95405 1425 aa30.71■■■□□ 2.51
CACNB3-210ENST00000548874 RIMS2Q9UQ26 1411 aa30.67■■■□□ 2.5
CACNB3-210ENST00000548874 NEXMIFQ5QGS0 1516 aa30.67■■■□□ 2.5
CACNB3-210ENST00000548874 ZNF326Q5BKZ1 582 aaKnown RBP30.65■■■□□ 2.5
CACNB3-210ENST00000548874 RPGRIP1LQ68CZ1 1315 aa30.65■■■□□ 2.5
CACNB3-210ENST00000548874 RGL3Q3MIN7 710 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms