RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 MADDQ8WXG6 1647 aa10.58□□□□□ -0.72
CALCOCO1-211ENST00000548431 DEPDC5O75140 1603 aa10.58□□□□□ -0.72
CALCOCO1-211ENST00000548431 AGLP35573 1532 aa10.58□□□□□ -0.72
CALCOCO1-211ENST00000548431 ADAMTSL3P82987 1691 aa10.57□□□□□ -0.72
CALCOCO1-211ENST00000548431 KANK1Q14678 1352 aa10.57□□□□□ -0.72
CALCOCO1-211ENST00000548431 RNF17Q9BXT8 1623 aaKnown RBP10.57□□□□□ -0.72
CALCOCO1-211ENST00000548431 KDM5DQ9BY66 1539 aa10.57□□□□□ -0.72
CALCOCO1-211ENST00000548431 RIMS1Q86UR5 1692 aaKnown RBP10.57□□□□□ -0.72
CALCOCO1-211ENST00000548431 MROH1Q8NDA8 1641 aa10.56□□□□□ -0.72
CALCOCO1-211ENST00000548431 PRDM15P57071 1507 aaPredicted RBP10.55□□□□□ -0.72
CALCOCO1-211ENST00000548431 ZC3H13Q5T200 1668 aaKnown RBP10.55□□□□□ -0.72
CALCOCO1-211ENST00000548431 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
CALCOCO1-211ENST00000548431 CEP152O94986 1710 aa10.54□□□□□ -0.72
CALCOCO1-211ENST00000548431 IQGAP3Q86VI3 1631 aa10.54□□□□□ -0.72
CALCOCO1-211ENST00000548431 CLSPNQ9HAW4 1339 aa10.53□□□□□ -0.72
CALCOCO1-211ENST00000548431 NUP155O75694 1391 aa10.52□□□□□ -0.72
CALCOCO1-211ENST00000548431 KIF3BO15066 747 aa10.52□□□□□ -0.73
CALCOCO1-211ENST00000548431 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
CALCOCO1-211ENST00000548431 MROH2AA6NES4 1674 aa10.52□□□□□ -0.73
CALCOCO1-211ENST00000548431 CLTCQ00610 1675 aaKnown RBP10.51□□□□□ -0.73
CALCOCO1-211ENST00000548431 VWDEQ8N2E2 1590 aa10.51□□□□□ -0.73
CALCOCO1-211ENST00000548431 TET3O43151 1660 aa10.5□□□□□ -0.73
CALCOCO1-211ENST00000548431 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
CALCOCO1-211ENST00000548431 C3P01024 1663 aa10.5□□□□□ -0.73
CALCOCO1-211ENST00000548431 SLC4A1APQ9BWU0 796 aaKnown RBP10.49□□□□□ -0.73
CALCOCO1-211ENST00000548431 CNTLNQ9NXG0 1405 aa10.49□□□□□ -0.73
CALCOCO1-211ENST00000548431 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
CALCOCO1-211ENST00000548431 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO1-211ENST00000548431 MPHOSPH9Q99550 1183 aa10.48□□□□□ -0.73
CALCOCO1-211ENST00000548431 ESF1Q9H501 851 aaKnown RBP10.48□□□□□ -0.73
CALCOCO1-211ENST00000548431 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
CALCOCO1-211ENST00000548431 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
CALCOCO1-211ENST00000548431 ARID4BQ4LE39 1312 aaPredicted RBP10.47□□□□□ -0.73
CALCOCO1-211ENST00000548431 PZPP20742 1482 aa10.47□□□□□ -0.73
CALCOCO1-211ENST00000548431 EFCAB6Q5THR3 1501 aa10.47□□□□□ -0.73
CALCOCO1-211ENST00000548431 GGT6Q6P531 493 aa10.46□□□□□ -0.73
CALCOCO1-211ENST00000548431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.46□□□□□ -0.739e-8■□□□□ 8.3
CALCOCO1-211ENST00000548431 WASHC2CQ9Y4E1 1318 aa10.46□□□□□ -0.73
CALCOCO1-211ENST00000548431 ABCC3O15438 1527 aa10.46□□□□□ -0.74
CALCOCO1-211ENST00000548431 ARHGAP31Q2M1Z3 1444 aa10.45□□□□□ -0.74
CALCOCO1-211ENST00000548431 E9PCH4 1651 aa10.43□□□□□ -0.74
CALCOCO1-211ENST00000548431 ZNF142P52746 1687 aaPredicted RBP10.43□□□□□ -0.74
CALCOCO1-211ENST00000548431 MYO3AQ8NEV4 1616 aa10.43□□□□□ -0.74
CALCOCO1-211ENST00000548431 SPHKAPQ2M3C7 1700 aa10.42□□□□□ -0.74
CALCOCO1-211ENST00000548431 PREX1Q8TCU6 1659 aa10.42□□□□□ -0.74
CALCOCO1-211ENST00000548431 PKD2Q13563 968 aa10.42□□□□□ -0.74
CALCOCO1-211ENST00000548431 ZEB1P37275 1124 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO1-211ENST00000548431 TRPM2O94759 1503 aa10.4□□□□□ -0.74
CALCOCO1-211ENST00000548431 TIMELESSQ9UNS1 1208 aa10.4□□□□□ -0.74
CALCOCO1-211ENST00000548431 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
CALCOCO1-211ENST00000548431 NPATQ14207 1427 aa10.39□□□□□ -0.75
CALCOCO1-211ENST00000548431 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
CALCOCO1-211ENST00000548431 PTPRMP28827 1452 aa10.38□□□□□ -0.75
CALCOCO1-211ENST00000548431 MLECQ14165 292 aa10.38□□□□□ -0.75
CALCOCO1-211ENST00000548431 PTPRTO14522 1441 aa10.38□□□□□ -0.75
CALCOCO1-211ENST00000548431 NEURL4Q96JN8 1562 aa10.37□□□□□ -0.75
CALCOCO1-211ENST00000548431 SPATA31D1Q6ZQQ2 1576 aa10.36□□□□□ -0.75
CALCOCO1-211ENST00000548431 CFAP65Q6ZU64 1925 aaKnown RBP10.36□□□□□ -0.75
CALCOCO1-211ENST00000548431 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
CALCOCO1-211ENST00000548431 KIF1BO60333 1816 aa10.35□□□□□ -0.75
CALCOCO1-211ENST00000548431 NOS1P29475 1434 aa10.35□□□□□ -0.75
CALCOCO1-211ENST00000548431 SLC52A1Q9NWF4 448 aa10.35□□□□□ -0.75
CALCOCO1-211ENST00000548431 ERVK-7P63135 1459 aa10.35□□□□□ -0.75
CALCOCO1-211ENST00000548431 MYO5BQ9ULV0 1848 aa10.35□□□□□ -0.75
CALCOCO1-211ENST00000548431 SYNMO15061 1565 aa10.35□□□□□ -0.75
CALCOCO1-211ENST00000548431 PIK3C2BO00750 1634 aa10.34□□□□□ -0.75
CALCOCO1-211ENST00000548431 TONSLQ96HA7 1378 aa10.34□□□□□ -0.75
CALCOCO1-211ENST00000548431 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
CALCOCO1-211ENST00000548431 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
CALCOCO1-211ENST00000548431 STAC3Q96MF2 364 aa10.33□□□□□ -0.76
CALCOCO1-211ENST00000548431 PLA2R1Q13018 1463 aa10.32□□□□□ -0.76
CALCOCO1-211ENST00000548431 NLRP1Q9C000 1473 aa10.32□□□□□ -0.76
CALCOCO1-211ENST00000548431 FOXD1Q16676 465 aa10.32□□□□□ -0.76
CALCOCO1-211ENST00000548431 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
CALCOCO1-211ENST00000548431 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
CALCOCO1-211ENST00000548431 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
CALCOCO1-211ENST00000548431 SETD1BQ9UPS6 1966 aaKnown RBP10.31□□□□□ -0.76
CALCOCO1-211ENST00000548431 LMTK3Q96Q04 1460 aa10.3□□□□□ -0.76
CALCOCO1-211ENST00000548431 UBR1Q8IWV7 1749 aa10.3□□□□□ -0.76
CALCOCO1-211ENST00000548431 TNRQ92752 1358 aa10.3□□□□□ -0.76
CALCOCO1-211ENST00000548431 NEUROD1Q13562 356 aa10.29□□□□□ -0.76
CALCOCO1-211ENST00000548431 ADGRB3O60242 1522 aa10.28□□□□□ -0.76
CALCOCO1-211ENST00000548431 RPGRIP1LQ68CZ1 1315 aa10.28□□□□□ -0.76
CALCOCO1-211ENST00000548431 UGGT1Q9NYU2 1555 aa10.27□□□□□ -0.76
CALCOCO1-211ENST00000548431 SPATA31E1Q6ZUB1 1445 aa10.27□□□□□ -0.77
CALCOCO1-211ENST00000548431 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
CALCOCO1-211ENST00000548431 TMEM131LA2VDJ0 1609 aa10.26□□□□□ -0.77
CALCOCO1-211ENST00000548431 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
CALCOCO1-211ENST00000548431 STAG3Q9UJ98 1225 aa10.26□□□□□ -0.77
CALCOCO1-211ENST00000548431 STRCQ7RTU9 1775 aa10.25□□□□□ -0.77
CALCOCO1-211ENST00000548431 FBXO31Q5XUX0 539 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO1-211ENST00000548431 IFT172Q9UG01 1749 aa10.24□□□□□ -0.77
CALCOCO1-211ENST00000548431 A2ML1A8K2U0 1454 aa10.24□□□□□ -0.77
CALCOCO1-211ENST00000548431 MYOM2P54296 1465 aa10.24□□□□□ -0.77
CALCOCO1-211ENST00000548431 IDI1Q13907 227 aa10.24□□□□□ -0.77
CALCOCO1-211ENST00000548431 PPLO60437 1756 aa10.24□□□□□ -0.77
CALCOCO1-211ENST00000548431 UHRF1BP1Q6BDS2 1440 aa10.24□□□□□ -0.77
CALCOCO1-211ENST00000548431 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
CALCOCO1-211ENST00000548431 VGFO15240 615 aaPredicted RBP10.22□□□□□ -0.77
CALCOCO1-211ENST00000548431 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms