RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 ARID4BQ4LE39 1312 aaPredicted RBP26.11■■□□□ 1.77
LETMD1-216ENST00000548401 FAM135AQ9P2D6 1515 aa26.09■■□□□ 1.77
LETMD1-216ENST00000548401 KIF3BO15066 747 aa26.07■■□□□ 1.76
LETMD1-216ENST00000548401 VWDEQ8N2E2 1590 aa26.06■■□□□ 1.76
LETMD1-216ENST00000548401 ZC3H13Q5T200 1668 aaKnown RBP26.06■■□□□ 1.76
LETMD1-216ENST00000548401 KDM5DQ9BY66 1539 aa26.05■■□□□ 1.76
LETMD1-216ENST00000548401 RIMS1Q86UR5 1692 aaKnown RBP26.04■■□□□ 1.76
LETMD1-216ENST00000548401 TRIM26Q12899 539 aaPredicted RBP26.03■■□□□ 1.76
LETMD1-216ENST00000548401 MLECQ14165 292 aa26.02■■□□□ 1.76
LETMD1-216ENST00000548401 ABCC3O15438 1527 aa26.02■■□□□ 1.76
LETMD1-216ENST00000548401 MROH2AA6NES4 1674 aa26.02■■□□□ 1.76
LETMD1-216ENST00000548401 CLTCQ00610 1675 aaKnown RBP26.02■■□□□ 1.76
LETMD1-216ENST00000548401 CEP152O94986 1710 aa26.02■■□□□ 1.76
LETMD1-216ENST00000548401 KDM4FA0A1W2PPD8 638 aa25.99■■□□□ 1.75
LETMD1-216ENST00000548401 IQGAP3Q86VI3 1631 aa25.99■■□□□ 1.75
LETMD1-216ENST00000548401 SETD5Q9C0A6 1442 aa25.97■■□□□ 1.75
LETMD1-216ENST00000548401 GGT6Q6P531 493 aa25.97■■□□□ 1.75
LETMD1-216ENST00000548401 LMTK2Q8IWU2 1503 aa25.97■■□□□ 1.75
LETMD1-216ENST00000548401 CNTLNQ9NXG0 1405 aa25.97■■□□□ 1.75
LETMD1-216ENST00000548401 CAMSAP1Q5T5Y3 1602 aa25.96■■□□□ 1.75
LETMD1-216ENST00000548401 PPP6R1Q9UPN7 881 aa25.94■■□□□ 1.74
LETMD1-216ENST00000548401 C3P01024 1663 aa25.93■■□□□ 1.74
LETMD1-216ENST00000548401 RAB3GAP2Q9H2M9 1393 aa25.93■■□□□ 1.74
LETMD1-216ENST00000548401 PTPRMP28827 1452 aa25.91■■□□□ 1.74
LETMD1-216ENST00000548401 TET3O43151 1660 aa25.91■■□□□ 1.74
LETMD1-216ENST00000548401 EFCAB6Q5THR3 1501 aa25.91■■□□□ 1.74
LETMD1-216ENST00000548401 KANK1Q14678 1352 aa25.88■■□□□ 1.73
LETMD1-216ENST00000548401 PZPP20742 1482 aa25.86■■□□□ 1.73
LETMD1-216ENST00000548401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.86■■□□□ 1.73
LETMD1-216ENST00000548401 WASHC2CQ9Y4E1 1318 aa25.85■■□□□ 1.73
LETMD1-216ENST00000548401 NUP155O75694 1391 aa25.84■■□□□ 1.73
LETMD1-216ENST00000548401 ARHGAP31Q2M1Z3 1444 aa25.83■■□□□ 1.73
LETMD1-216ENST00000548401 E9PCH4 1651 aa25.83■■□□□ 1.73
LETMD1-216ENST00000548401 ZMYM3Q14202 1370 aa25.82■■□□□ 1.72
LETMD1-216ENST00000548401 NPATQ14207 1427 aa25.81■■□□□ 1.72
LETMD1-216ENST00000548401 ESF1Q9H501 851 aaKnown RBP25.8■■□□□ 1.72
LETMD1-216ENST00000548401 PREX1Q8TCU6 1659 aa25.79■■□□□ 1.72
LETMD1-216ENST00000548401 RPRD2Q5VT52 1461 aaKnown RBP25.79■■□□□ 1.72
LETMD1-216ENST00000548401 SPATA31D1Q6ZQQ2 1576 aa25.78■■□□□ 1.72
LETMD1-216ENST00000548401 HRCP23327 699 aa25.77■■□□□ 1.72
LETMD1-216ENST00000548401 ERVK-7P63135 1459 aa25.77■■□□□ 1.72
LETMD1-216ENST00000548401 ACIN1Q9UKV3 1341 aaKnown RBP25.74■■□□□ 1.71
LETMD1-216ENST00000548401 CEBPAP49715 358 aaPredicted RBP25.73■■□□□ 1.71
LETMD1-216ENST00000548401 TRIM52Q96A61 297 aa25.72■■□□□ 1.71
LETMD1-216ENST00000548401 SYNMO15061 1565 aa25.72■■□□□ 1.71
LETMD1-216ENST00000548401 MYO3AQ8NEV4 1616 aa25.71■■□□□ 1.71
LETMD1-216ENST00000548401 NOS1P29475 1434 aa25.71■■□□□ 1.71
LETMD1-216ENST00000548401 PCGF6Q9BYE7 350 aa25.7■■□□□ 1.7
LETMD1-216ENST00000548401 SPHKAPQ2M3C7 1700 aa25.7■■□□□ 1.7
LETMD1-216ENST00000548401 CFAP65Q6ZU64 1925 aaKnown RBP25.67■■□□□ 1.7
LETMD1-216ENST00000548401 ZNF142P52746 1687 aaPredicted RBP25.67■■□□□ 1.7
LETMD1-216ENST00000548401 FBXO31Q5XUX0 539 aaPredicted RBP25.66■■□□□ 1.7
LETMD1-216ENST00000548401 PIK3C2BO00750 1634 aa25.65■■□□□ 1.7
LETMD1-216ENST00000548401 SLC4A1APQ9BWU0 796 aaKnown RBP25.64■■□□□ 1.7
LETMD1-216ENST00000548401 TNRQ92752 1358 aa25.64■■□□□ 1.69
LETMD1-216ENST00000548401 PTPRTO14522 1441 aa25.63■■□□□ 1.69
LETMD1-216ENST00000548401 TRPM2O94759 1503 aa25.63■■□□□ 1.69
LETMD1-216ENST00000548401 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
LETMD1-216ENST00000548401 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
LETMD1-216ENST00000548401 MPHOSPH9Q99550 1183 aa25.62■■□□□ 1.69
LETMD1-216ENST00000548401 PKD2Q13563 968 aa25.61■■□□□ 1.69
LETMD1-216ENST00000548401 PLA2R1Q13018 1463 aa25.6■■□□□ 1.69
LETMD1-216ENST00000548401 UGGT1Q9NYU2 1555 aa25.6■■□□□ 1.69
LETMD1-216ENST00000548401 CEP170BQ9Y4F5 1589 aaPredicted RBP25.6■■□□□ 1.69
LETMD1-216ENST00000548401 NLRP1Q9C000 1473 aa25.6■■□□□ 1.69
LETMD1-216ENST00000548401 LMTK3Q96Q04 1460 aa25.58■■□□□ 1.69
LETMD1-216ENST00000548401 CLTCL1P53675 1640 aa25.57■■□□□ 1.68
LETMD1-216ENST00000548401 UHRF1BP1Q6BDS2 1440 aa25.56■■□□□ 1.68
LETMD1-216ENST00000548401 A2ML1A8K2U0 1454 aa25.54■■□□□ 1.68
LETMD1-216ENST00000548401 KDM5AP29375 1690 aaKnown RBP25.54■■□□□ 1.68
LETMD1-216ENST00000548401 FOXD1Q16676 465 aa25.53■■□□□ 1.68
LETMD1-216ENST00000548401 UBR1Q8IWV7 1749 aa25.53■■□□□ 1.68
LETMD1-216ENST00000548401 DHX57Q6P158 1386 aaKnown RBP25.53■■□□□ 1.68
LETMD1-216ENST00000548401 ADGRB3O60242 1522 aa25.53■■□□□ 1.68
LETMD1-216ENST00000548401 TMEM131LA2VDJ0 1609 aa25.48■■□□□ 1.67
LETMD1-216ENST00000548401 ANKRD30BQ9BXX2 1392 aa25.47■■□□□ 1.67
LETMD1-216ENST00000548401 MYO5BQ9ULV0 1848 aa25.46■■□□□ 1.67
LETMD1-216ENST00000548401 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
LETMD1-216ENST00000548401 IDI1Q13907 227 aa25.43■■□□□ 1.66
LETMD1-216ENST00000548401 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
LETMD1-216ENST00000548401 KIF1BO60333 1816 aa25.42■■□□□ 1.66
LETMD1-216ENST00000548401 CCDC144AA2RUR9 1427 aa25.42■■□□□ 1.66
LETMD1-216ENST00000548401 NEURL4Q96JN8 1562 aa25.4■■□□□ 1.66
LETMD1-216ENST00000548401 SLIT1O75093 1534 aa25.38■■□□□ 1.65
LETMD1-216ENST00000548401 ARHGAP23Q9P227 1491 aa25.38■■□□□ 1.65
LETMD1-216ENST00000548401 SPATA31E1Q6ZUB1 1445 aa25.36■■□□□ 1.65
LETMD1-216ENST00000548401 POLR1AO95602 1720 aaPredicted RBP25.34■■□□□ 1.65
LETMD1-216ENST00000548401 ZFYVE9O95405 1425 aa25.32■■□□□ 1.64
LETMD1-216ENST00000548401 STRCQ7RTU9 1775 aa25.32■■□□□ 1.64
LETMD1-216ENST00000548401 HSPA2P54652 639 aa25.31■■□□□ 1.64
LETMD1-216ENST00000548401 IFT172Q9UG01 1749 aa25.31■■□□□ 1.64
LETMD1-216ENST00000548401 NEXMIFQ5QGS0 1516 aa25.31■■□□□ 1.64
LETMD1-216ENST00000548401 TMEM2Q9UHN6 1383 aa25.31■■□□□ 1.64
LETMD1-216ENST00000548401 PPLO60437 1756 aa25.28■■□□□ 1.64
LETMD1-216ENST00000548401 THEMISQ8N1K5 641 aaPredicted RBP25.27■■□□□ 1.64
LETMD1-216ENST00000548401 STAG3Q9UJ98 1225 aa25.26■■□□□ 1.63
LETMD1-216ENST00000548401 SCAF11Q99590 1463 aaKnown RBP25.26■■□□□ 1.63
LETMD1-216ENST00000548401 RIMS2Q9UQ26 1411 aa25.25■■□□□ 1.63
LETMD1-216ENST00000548401 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
LETMD1-216ENST00000548401 MED14O60244 1454 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms