RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 SHANK2Q9UPX8 1470 aa23.74■■□□□ 1.39
C12orf49-204ENST00000548356 NEURL4Q96JN8 1562 aa23.74■■□□□ 1.39
C12orf49-204ENST00000548356 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
C12orf49-204ENST00000548356 ZNF644Q9H582 1327 aaPredicted RBP23.73■■□□□ 1.39
C12orf49-204ENST00000548356 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
C12orf49-204ENST00000548356 PIP4K2BP78356 416 aa23.72■■□□□ 1.39
C12orf49-204ENST00000548356 FAM135AQ9P2D6 1515 aa23.72■■□□□ 1.39
C12orf49-204ENST00000548356 TIAM1Q13009 1591 aa23.71■■□□□ 1.39
C12orf49-204ENST00000548356 PZPP20742 1482 aa23.71■■□□□ 1.39
C12orf49-204ENST00000548356 FBXO31Q5XUX0 539 aaPredicted RBP23.69■■□□□ 1.38
C12orf49-204ENST00000548356 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
C12orf49-204ENST00000548356 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
C12orf49-204ENST00000548356 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
C12orf49-204ENST00000548356 KIF3BO15066 747 aa23.66■■□□□ 1.38
C12orf49-204ENST00000548356 THEMISQ8N1K5 641 aaPredicted RBP23.65■■□□□ 1.38
C12orf49-204ENST00000548356 VWDEQ8N2E2 1590 aa23.65■■□□□ 1.38
C12orf49-204ENST00000548356 NLRP1Q9C000 1473 aa23.64■■□□□ 1.38
C12orf49-204ENST00000548356 CEP162Q5TB80 1403 aa23.64■■□□□ 1.37
C12orf49-204ENST00000548356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.64■■□□□ 1.37
C12orf49-204ENST00000548356 WASHC2CQ9Y4E1 1318 aa23.63■■□□□ 1.37
C12orf49-204ENST00000548356 MED14O60244 1454 aa23.63■■□□□ 1.37
C12orf49-204ENST00000548356 MIA2Q96PC5 1412 aa23.63■■□□□ 1.37
C12orf49-204ENST00000548356 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
C12orf49-204ENST00000548356 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
C12orf49-204ENST00000548356 RSPH4AQ5TD94 716 aa23.61■■□□□ 1.37
C12orf49-204ENST00000548356 DEPDC5O75140 1603 aa23.61■■□□□ 1.37
C12orf49-204ENST00000548356 UGGT1Q9NYU2 1555 aa23.6■■□□□ 1.37
C12orf49-204ENST00000548356 ALKQ9UM73 1620 aa23.59■■□□□ 1.37
C12orf49-204ENST00000548356 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
C12orf49-204ENST00000548356 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
C12orf49-204ENST00000548356 IQGAP1P46940 1657 aa23.53■■□□□ 1.36
C12orf49-204ENST00000548356 NCOA2Q15596 1464 aa23.5■■□□□ 1.35
C12orf49-204ENST00000548356 LRRC7Q96NW7 1537 aa23.5■■□□□ 1.35
C12orf49-204ENST00000548356 ARHGEF5Q12774 1597 aa23.49■■□□□ 1.35
C12orf49-204ENST00000548356 SYNMO15061 1565 aa23.48■■□□□ 1.35
C12orf49-204ENST00000548356 TSPY4P0CV99 314 aa23.48■■□□□ 1.35
C12orf49-204ENST00000548356 TSPY10P0CW01 314 aa23.48■■□□□ 1.35
C12orf49-204ENST00000548356 RNF17Q9BXT8 1623 aaKnown RBP23.48■■□□□ 1.35
C12orf49-204ENST00000548356 STRCP1A6NGW2 1772 aa23.46■■□□□ 1.35
C12orf49-204ENST00000548356 ABCC3O15438 1527 aa23.46■■□□□ 1.35
C12orf49-204ENST00000548356 ZC3H13Q5T200 1668 aaKnown RBP23.45■■□□□ 1.34
C12orf49-204ENST00000548356 ERVK-7P63135 1459 aa23.43■■□□□ 1.34
C12orf49-204ENST00000548356 MAST1Q9Y2H9 1570 aa23.4■■□□□ 1.34
C12orf49-204ENST00000548356 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
C12orf49-204ENST00000548356 EIF2AK4Q9P2K8 1649 aaKnown RBP23.39■■□□□ 1.33
C12orf49-204ENST00000548356 SCAF11Q99590 1463 aaKnown RBP23.37■■□□□ 1.33
C12orf49-204ENST00000548356 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
C12orf49-204ENST00000548356 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
C12orf49-204ENST00000548356 RGS17Q9UGC6 210 aaPredicted RBP23.34■■□□□ 1.33
C12orf49-204ENST00000548356 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
C12orf49-204ENST00000548356 SLIT1O75093 1534 aa23.33■■□□□ 1.33
C12orf49-204ENST00000548356 LTKP29376 864 aa23.32■■□□□ 1.32
C12orf49-204ENST00000548356 TXNDC2Q86VQ3 553 aa23.31■■□□□ 1.32
C12orf49-204ENST00000548356 CEP152O94986 1710 aa23.29■■□□□ 1.32
C12orf49-204ENST00000548356 ARHGAP31Q2M1Z3 1444 aa23.29■■□□□ 1.32
C12orf49-204ENST00000548356 FAM135BQ49AJ0 1406 aa23.28■■□□□ 1.32
C12orf49-204ENST00000548356 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
C12orf49-204ENST00000548356 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
C12orf49-204ENST00000548356 DUOX2Q9NRD8 1548 aa23.27■■□□□ 1.32
C12orf49-204ENST00000548356 XIRP1Q702N8 1843 aaKnown RBP23.26■■□□□ 1.31
C12orf49-204ENST00000548356 CFAP65Q6ZU64 1925 aaKnown RBP23.24■■□□□ 1.31
C12orf49-204ENST00000548356 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
C12orf49-204ENST00000548356 MYOM3Q5VTT5 1437 aa23.23■■□□□ 1.31
C12orf49-204ENST00000548356 TMEM2Q9UHN6 1383 aa23.22■■□□□ 1.31
C12orf49-204ENST00000548356 ERBINQ96RT1 1412 aa23.19■■□□□ 1.3
C12orf49-204ENST00000548356 TMEM94Q12767 1356 aa23.19■■□□□ 1.3
C12orf49-204ENST00000548356 KIF15Q9NS87 1388 aa23.18■■□□□ 1.3
C12orf49-204ENST00000548356 PIK3C2BO00750 1634 aa23.18■■□□□ 1.3
C12orf49-204ENST00000548356 VPS8Q8N3P4 1428 aa23.17■■□□□ 1.3
C12orf49-204ENST00000548356 KCNA6P17658 529 aa23.17■■□□□ 1.3
C12orf49-204ENST00000548356 POTEAQ6S8J7 498 aa23.17■■□□□ 1.3
C12orf49-204ENST00000548356 KDM5AP29375 1690 aaKnown RBP23.16■■□□□ 1.3
C12orf49-204ENST00000548356 MAP3K1Q13233 1512 aa23.15■■□□□ 1.3
C12orf49-204ENST00000548356 STAG3Q9UJ98 1225 aa23.15■■□□□ 1.3
C12orf49-204ENST00000548356 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
C12orf49-204ENST00000548356 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
C12orf49-204ENST00000548356 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
C12orf49-204ENST00000548356 TET3O43151 1660 aa23.12■■□□□ 1.29
C12orf49-204ENST00000548356 KANK1Q14678 1352 aa23.12■■□□□ 1.29
C12orf49-204ENST00000548356 PROSER2Q86WR7 435 aaPredicted RBP23.11■■□□□ 1.29
C12orf49-204ENST00000548356 RRP7BPQ9NSQ0 103 aa23.11■■□□□ 1.29
C12orf49-204ENST00000548356 ABCC5O15440 1437 aa23.1■■□□□ 1.29
C12orf49-204ENST00000548356 LMTK2Q8IWU2 1503 aa23.1■■□□□ 1.29
C12orf49-204ENST00000548356 IDI1Q13907 227 aa23.1■■□□□ 1.29
C12orf49-204ENST00000548356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.1■■□□□ 1.29
C12orf49-204ENST00000548356 NKTRP30414 1462 aaKnown RBP23.09■■□□□ 1.29
C12orf49-204ENST00000548356 CROCC2H7BZ55 1655 aa23.09■■□□□ 1.29
C12orf49-204ENST00000548356 SLC26A8Q96RN1 970 aa23.08■■□□□ 1.29
C12orf49-204ENST00000548356 NWD1Q149M9 1564 aa23.07■■□□□ 1.28
C12orf49-204ENST00000548356 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
C12orf49-204ENST00000548356 MSH6P52701 1360 aa23.04■■□□□ 1.28
C12orf49-204ENST00000548356 NOS1P29475 1434 aa23.04■■□□□ 1.28
C12orf49-204ENST00000548356 DAPK1P53355 1430 aa23.03■■□□□ 1.28
C12orf49-204ENST00000548356 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
C12orf49-204ENST00000548356 JCADQ9P266 1359 aa23.02■■□□□ 1.28
C12orf49-204ENST00000548356 SLAIN2Q9P270 581 aa23.02■■□□□ 1.28
C12orf49-204ENST00000548356 PTPN23Q9H3S7 1636 aa23.01■■□□□ 1.27
C12orf49-204ENST00000548356 SLC52A1Q9NWF4 448 aa23.01■■□□□ 1.27
C12orf49-204ENST00000548356 ANKRD30AQ9BXX3 1397 aa22.99■■□□□ 1.27
C12orf49-204ENST00000548356 PHLPP1O60346 1717 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms