RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PLA2R1Q13018 1463 aa19.08■□□□□ 0.64
TRAFD1-205ENST00000548277 NCOA2Q15596 1464 aa19.08■□□□□ 0.64
TRAFD1-205ENST00000548277 TCOF1Q13428 1488 aaKnown RBP19.07■□□□□ 0.64
TRAFD1-205ENST00000548277 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
TRAFD1-205ENST00000548277 A2ML1A8K2U0 1454 aa19.06■□□□□ 0.64
TRAFD1-205ENST00000548277 SOCS7O14512 581 aa19.06■□□□□ 0.64
TRAFD1-205ENST00000548277 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
TRAFD1-205ENST00000548277 CCDC141Q6ZP82 1450 aa19.05■□□□□ 0.64
TRAFD1-205ENST00000548277 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
TRAFD1-205ENST00000548277 TNRQ92752 1358 aa19.05■□□□□ 0.64
TRAFD1-205ENST00000548277 TSPY4P0CV99 314 aa19.04■□□□□ 0.64
TRAFD1-205ENST00000548277 TSPY10P0CW01 314 aa19.04■□□□□ 0.64
TRAFD1-205ENST00000548277 PIP4K2BP78356 416 aa19.03■□□□□ 0.64
TRAFD1-205ENST00000548277 RSPH4AQ5TD94 716 aa19.03■□□□□ 0.64
TRAFD1-205ENST00000548277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.01■□□□□ 0.63
TRAFD1-205ENST00000548277 KDM5DQ9BY66 1539 aa19■□□□□ 0.63
TRAFD1-205ENST00000548277 ANKLE2Q86XL3 938 aa18.99■□□□□ 0.63
TRAFD1-205ENST00000548277 PZPP20742 1482 aa18.98■□□□□ 0.63
TRAFD1-205ENST00000548277 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
TRAFD1-205ENST00000548277 NEURL4Q96JN8 1562 aa18.97■□□□□ 0.63
TRAFD1-205ENST00000548277 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
TRAFD1-205ENST00000548277 MIA2Q96PC5 1412 aa18.96■□□□□ 0.63
TRAFD1-205ENST00000548277 ARHGEF5Q12774 1597 aa18.96■□□□□ 0.63
TRAFD1-205ENST00000548277 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
TRAFD1-205ENST00000548277 UGGT1Q9NYU2 1555 aa18.94■□□□□ 0.62
TRAFD1-205ENST00000548277 TOM1O60784 492 aa18.94■□□□□ 0.62
TRAFD1-205ENST00000548277 HSPA1LP34931 641 aa18.94■□□□□ 0.62
TRAFD1-205ENST00000548277 SHANK2Q9UPX8 1470 aa18.94■□□□□ 0.62
TRAFD1-205ENST00000548277 LRRC9Q6ZRR7 1453 aa18.93■□□□□ 0.62
TRAFD1-205ENST00000548277 CEP152O94986 1710 aa18.92■□□□□ 0.62
TRAFD1-205ENST00000548277 FAM135AQ9P2D6 1515 aa18.9■□□□□ 0.62
TRAFD1-205ENST00000548277 NPHP4O75161 1426 aaPredicted RBP18.9■□□□□ 0.62
TRAFD1-205ENST00000548277 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
TRAFD1-205ENST00000548277 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
TRAFD1-205ENST00000548277 CPS1P31327 1500 aa18.9■□□□□ 0.62
TRAFD1-205ENST00000548277 IQGAP1P46940 1657 aa18.88■□□□□ 0.61
TRAFD1-205ENST00000548277 STRCP1A6NGW2 1772 aa18.88■□□□□ 0.61
TRAFD1-205ENST00000548277 ABCC3O15438 1527 aa18.87■□□□□ 0.61
TRAFD1-205ENST00000548277 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
TRAFD1-205ENST00000548277 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
TRAFD1-205ENST00000548277 MAST1Q9Y2H9 1570 aa18.86■□□□□ 0.61
TRAFD1-205ENST00000548277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRAFD1-205ENST00000548277 ZC3H13Q5T200 1668 aaKnown RBP18.85■□□□□ 0.61
TRAFD1-205ENST00000548277 DEPDC5O75140 1603 aa18.85■□□□□ 0.61
TRAFD1-205ENST00000548277 RRP7BPQ9NSQ0 103 aa18.84■□□□□ 0.61
TRAFD1-205ENST00000548277 EIF2AK4Q9P2K8 1649 aaKnown RBP18.83■□□□□ 0.61
TRAFD1-205ENST00000548277 MED14O60244 1454 aa18.83■□□□□ 0.6
TRAFD1-205ENST00000548277 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.6
TRAFD1-205ENST00000548277 MROH1Q8NDA8 1641 aa18.82■□□□□ 0.6
TRAFD1-205ENST00000548277 UBR1Q8IWV7 1749 aa18.82■□□□□ 0.6
TRAFD1-205ENST00000548277 ERVK-7P63135 1459 aa18.82■□□□□ 0.6
TRAFD1-205ENST00000548277 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
TRAFD1-205ENST00000548277 APLP2Q06481 763 aa18.79■□□□□ 0.6
TRAFD1-205ENST00000548277 TXNDC2Q86VQ3 553 aa18.79■□□□□ 0.6
TRAFD1-205ENST00000548277 DUOX2Q9NRD8 1548 aa18.79■□□□□ 0.6
TRAFD1-205ENST00000548277 LTKP29376 864 aa18.78■□□□□ 0.6
TRAFD1-205ENST00000548277 CHIC2Q9UKJ5 165 aa18.78■□□□□ 0.6
TRAFD1-205ENST00000548277 ALKQ9UM73 1620 aa18.78■□□□□ 0.6
TRAFD1-205ENST00000548277 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
TRAFD1-205ENST00000548277 LRRC7Q96NW7 1537 aa18.77■□□□□ 0.6
TRAFD1-205ENST00000548277 MAP3K1Q13233 1512 aa18.76■□□□□ 0.59
TRAFD1-205ENST00000548277 PTPN23Q9H3S7 1636 aa18.76■□□□□ 0.59
TRAFD1-205ENST00000548277 STAG3Q9UJ98 1225 aa18.76■□□□□ 0.59
TRAFD1-205ENST00000548277 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
TRAFD1-205ENST00000548277 CROCC2H7BZ55 1655 aa18.76■□□□□ 0.59
TRAFD1-205ENST00000548277 ABCC5O15440 1437 aa18.74■□□□□ 0.59
TRAFD1-205ENST00000548277 EID1Q9Y6B2 187 aa18.73■□□□□ 0.59
TRAFD1-205ENST00000548277 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
TRAFD1-205ENST00000548277 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
TRAFD1-205ENST00000548277 PIK3C2BO00750 1634 aa18.72■□□□□ 0.59
TRAFD1-205ENST00000548277 SYNMO15061 1565 aa18.69■□□□□ 0.58
TRAFD1-205ENST00000548277 DAPK1P53355 1430 aa18.69■□□□□ 0.58
TRAFD1-205ENST00000548277 PRDM15P57071 1507 aaPredicted RBP18.69■□□□□ 0.58
TRAFD1-205ENST00000548277 KANK1Q14678 1352 aa18.68■□□□□ 0.58
TRAFD1-205ENST00000548277 ERBINQ96RT1 1412 aa18.68■□□□□ 0.58
TRAFD1-205ENST00000548277 IDI1Q13907 227 aa18.68■□□□□ 0.58
TRAFD1-205ENST00000548277 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
TRAFD1-205ENST00000548277 ARHGAP31Q2M1Z3 1444 aa18.66■□□□□ 0.58
TRAFD1-205ENST00000548277 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
TRAFD1-205ENST00000548277 SLIT1O75093 1534 aa18.66■□□□□ 0.58
TRAFD1-205ENST00000548277 BCANQ96GW7 911 aa18.66■□□□□ 0.58
TRAFD1-205ENST00000548277 SLC26A8Q96RN1 970 aa18.66■□□□□ 0.58
TRAFD1-205ENST00000548277 FAM50AQ14320 339 aaKnown RBP18.64■□□□□ 0.57
TRAFD1-205ENST00000548277 ANKRD30AQ9BXX3 1397 aa18.64■□□□□ 0.57
TRAFD1-205ENST00000548277 TMEM2Q9UHN6 1383 aa18.64■□□□□ 0.57
TRAFD1-205ENST00000548277 FGD6Q6ZV73 1430 aa18.64■□□□□ 0.57
TRAFD1-205ENST00000548277 MYO5BQ9ULV0 1848 aa18.62■□□□□ 0.57
TRAFD1-205ENST00000548277 PROSER2Q86WR7 435 aaPredicted RBP18.61■□□□□ 0.57
TRAFD1-205ENST00000548277 EFCAB6Q5THR3 1501 aa18.6■□□□□ 0.57
TRAFD1-205ENST00000548277 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
TRAFD1-205ENST00000548277 KCNA6P17658 529 aa18.58■□□□□ 0.56
TRAFD1-205ENST00000548277 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
TRAFD1-205ENST00000548277 KDM5AP29375 1690 aaKnown RBP18.55■□□□□ 0.56
TRAFD1-205ENST00000548277 LMTK2Q8IWU2 1503 aa18.54■□□□□ 0.56
TRAFD1-205ENST00000548277 TET3O43151 1660 aa18.54■□□□□ 0.56
TRAFD1-205ENST00000548277 CHGAP10645 457 aaKnown RBP18.54■□□□□ 0.56
TRAFD1-205ENST00000548277 ROBO1Q9Y6N7 1651 aa18.54■□□□□ 0.56
TRAFD1-205ENST00000548277 NOS1P29475 1434 aa18.52■□□□□ 0.56
TRAFD1-205ENST00000548277 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.56
TRAFD1-205ENST00000548277 GCC2Q8IWJ2 1684 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms