RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
NR4A1-209ENST00000548232 PLA2R1Q13018 1463 aa20.7■□□□□ 0.9
NR4A1-209ENST00000548232 TNRQ92752 1358 aa20.7■□□□□ 0.9
NR4A1-209ENST00000548232 IQSEC2Q5JU85 1478 aa20.69■□□□□ 0.9
NR4A1-209ENST00000548232 A2ML1A8K2U0 1454 aa20.68■□□□□ 0.9
NR4A1-209ENST00000548232 TCOF1Q13428 1488 aaKnown RBP20.68■□□□□ 0.9
NR4A1-209ENST00000548232 ZNF142P52746 1687 aaPredicted RBP20.65■□□□□ 0.9
NR4A1-209ENST00000548232 KANK4Q5T7N3 995 aaPredicted RBP20.64■□□□□ 0.89
NR4A1-209ENST00000548232 ANKLE2Q86XL3 938 aa20.64■□□□□ 0.89
NR4A1-209ENST00000548232 THEMISQ8N1K5 641 aaPredicted RBP20.64■□□□□ 0.89
NR4A1-209ENST00000548232 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
NR4A1-209ENST00000548232 DNMT1P26358 1616 aaKnown RBP20.63■□□□□ 0.89
NR4A1-209ENST00000548232 KDM5DQ9BY66 1539 aa20.62■□□□□ 0.89
NR4A1-209ENST00000548232 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
NR4A1-209ENST00000548232 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
NR4A1-209ENST00000548232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.61■□□□□ 0.89
NR4A1-209ENST00000548232 PIP4K2BP78356 416 aa20.61■□□□□ 0.89
NR4A1-209ENST00000548232 PZPP20742 1482 aa20.61■□□□□ 0.89
NR4A1-209ENST00000548232 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
NR4A1-209ENST00000548232 SOCS7O14512 581 aa20.6■□□□□ 0.89
NR4A1-209ENST00000548232 ARHGEF5Q12774 1597 aa20.58■□□□□ 0.88
NR4A1-209ENST00000548232 SPATA31D1Q6ZQQ2 1576 aa20.55■□□□□ 0.88
NR4A1-209ENST00000548232 TOM1O60784 492 aa20.55■□□□□ 0.88
NR4A1-209ENST00000548232 APLP2Q06481 763 aa20.54■□□□□ 0.88
NR4A1-209ENST00000548232 SHANK2Q9UPX8 1470 aa20.53■□□□□ 0.88
NR4A1-209ENST00000548232 FAM135AQ9P2D6 1515 aa20.53■□□□□ 0.88
NR4A1-209ENST00000548232 NLRP1Q9C000 1473 aa20.52■□□□□ 0.88
NR4A1-209ENST00000548232 UGGT1Q9NYU2 1555 aa20.51■□□□□ 0.87
NR4A1-209ENST00000548232 HSPA1LP34931 641 aa20.51■□□□□ 0.87
NR4A1-209ENST00000548232 RRP7BPQ9NSQ0 103 aa20.51■□□□□ 0.87
NR4A1-209ENST00000548232 NPHP4O75161 1426 aaPredicted RBP20.51■□□□□ 0.87
NR4A1-209ENST00000548232 MYOM3Q5VTT5 1437 aa20.51■□□□□ 0.87
NR4A1-209ENST00000548232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.87
NR4A1-209ENST00000548232 NEURL4Q96JN8 1562 aa20.5■□□□□ 0.87
NR4A1-209ENST00000548232 ABCC3O15438 1527 aa20.48■□□□□ 0.87
NR4A1-209ENST00000548232 CPS1P31327 1500 aa20.48■□□□□ 0.87
NR4A1-209ENST00000548232 POLR1AO95602 1720 aaPredicted RBP20.47■□□□□ 0.87
NR4A1-209ENST00000548232 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
NR4A1-209ENST00000548232 MAP3K1Q13233 1512 aa20.46■□□□□ 0.87
NR4A1-209ENST00000548232 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
NR4A1-209ENST00000548232 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
NR4A1-209ENST00000548232 RNF17Q9BXT8 1623 aaKnown RBP20.43■□□□□ 0.86
NR4A1-209ENST00000548232 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
NR4A1-209ENST00000548232 KIF15Q9NS87 1388 aa20.43■□□□□ 0.86
NR4A1-209ENST00000548232 MED14O60244 1454 aa20.43■□□□□ 0.86
NR4A1-209ENST00000548232 TXNDC2Q86VQ3 553 aa20.42■□□□□ 0.86
NR4A1-209ENST00000548232 DUOX2Q9NRD8 1548 aa20.42■□□□□ 0.86
NR4A1-209ENST00000548232 VWDEQ8N2E2 1590 aa20.41■□□□□ 0.86
NR4A1-209ENST00000548232 ABCC5O15440 1437 aa20.4■□□□□ 0.86
NR4A1-209ENST00000548232 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
NR4A1-209ENST00000548232 LTKP29376 864 aa20.39■□□□□ 0.85
NR4A1-209ENST00000548232 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
NR4A1-209ENST00000548232 EIF2AK4Q9P2K8 1649 aaKnown RBP20.38■□□□□ 0.85
NR4A1-209ENST00000548232 EID1Q9Y6B2 187 aa20.38■□□□□ 0.85
NR4A1-209ENST00000548232 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
NR4A1-209ENST00000548232 MROH1Q8NDA8 1641 aa20.37■□□□□ 0.85
NR4A1-209ENST00000548232 KANK1Q14678 1352 aa20.36■□□□□ 0.85
NR4A1-209ENST00000548232 CFAP65Q6ZU64 1925 aaKnown RBP20.36■□□□□ 0.85
NR4A1-209ENST00000548232 IQGAP1P46940 1657 aa20.35■□□□□ 0.85
NR4A1-209ENST00000548232 CEP152O94986 1710 aa20.35■□□□□ 0.85
NR4A1-209ENST00000548232 LRRC7Q96NW7 1537 aa20.33■□□□□ 0.85
NR4A1-209ENST00000548232 PTPN23Q9H3S7 1636 aa20.33■□□□□ 0.84
NR4A1-209ENST00000548232 DAPK1P53355 1430 aa20.33■□□□□ 0.84
NR4A1-209ENST00000548232 ERBINQ96RT1 1412 aa20.33■□□□□ 0.84
NR4A1-209ENST00000548232 SCAF11Q99590 1463 aaKnown RBP20.32■□□□□ 0.84
NR4A1-209ENST00000548232 PHF23Q9BUL5 403 aaPredicted RBP20.32■□□□□ 0.84
NR4A1-209ENST00000548232 ANKRD30AQ9BXX3 1397 aa20.32■□□□□ 0.84
NR4A1-209ENST00000548232 ARHGAP31Q2M1Z3 1444 aa20.31■□□□□ 0.84
NR4A1-209ENST00000548232 FGD6Q6ZV73 1430 aa20.31■□□□□ 0.84
NR4A1-209ENST00000548232 IDI1Q13907 227 aa20.3■□□□□ 0.84
NR4A1-209ENST00000548232 FAM50AQ14320 339 aaKnown RBP20.3■□□□□ 0.84
NR4A1-209ENST00000548232 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
NR4A1-209ENST00000548232 BCANQ96GW7 911 aa20.28■□□□□ 0.84
NR4A1-209ENST00000548232 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.83
NR4A1-209ENST00000548232 STRCP1A6NGW2 1772 aa20.26■□□□□ 0.83
NR4A1-209ENST00000548232 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
NR4A1-209ENST00000548232 TMEM2Q9UHN6 1383 aa20.26■□□□□ 0.83
NR4A1-209ENST00000548232 SLC26A8Q96RN1 970 aa20.26■□□□□ 0.83
NR4A1-209ENST00000548232 ARHGAP23Q9P227 1491 aa20.25■□□□□ 0.83
NR4A1-209ENST00000548232 ALKQ9UM73 1620 aa20.25■□□□□ 0.83
NR4A1-209ENST00000548232 SLIT1O75093 1534 aa20.25■□□□□ 0.83
NR4A1-209ENST00000548232 CROCC2H7BZ55 1655 aa20.24■□□□□ 0.83
NR4A1-209ENST00000548232 RBM33Q96EV2 1170 aaKnown RBP20.22■□□□□ 0.83
NR4A1-209ENST00000548232 PIK3C2BO00750 1634 aa20.21■□□□□ 0.83
NR4A1-209ENST00000548232 PROSER2Q86WR7 435 aaPredicted RBP20.21■□□□□ 0.83
NR4A1-209ENST00000548232 KCNA6P17658 529 aa20.2■□□□□ 0.82
NR4A1-209ENST00000548232 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
NR4A1-209ENST00000548232 SYNMO15061 1565 aa20.19■□□□□ 0.82
NR4A1-209ENST00000548232 EFCAB6Q5THR3 1501 aa20.18■□□□□ 0.82
NR4A1-209ENST00000548232 TMEM94Q12767 1356 aa20.17■□□□□ 0.82
NR4A1-209ENST00000548232 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
NR4A1-209ENST00000548232 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
NR4A1-209ENST00000548232 NOS1P29475 1434 aa20.14■□□□□ 0.81
NR4A1-209ENST00000548232 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.81
NR4A1-209ENST00000548232 PPP1R15AO75807 674 aaPredicted RBP20.14■□□□□ 0.81
NR4A1-209ENST00000548232 HDGFP51858 240 aaKnown RBP20.12■□□□□ 0.81
NR4A1-209ENST00000548232 ADGRL2O95490 1459 aa20.11■□□□□ 0.81
NR4A1-209ENST00000548232 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
NR4A1-209ENST00000548232 ITGAEP38570 1179 aa20.09■□□□□ 0.81
NR4A1-209ENST00000548232 TET3O43151 1660 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms