RNA–Protein interactions for RNA: ENST00000548177.5

CALCOCO1-209, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-209ENST00000548177 SHANK2Q9UPX8 1470 aa16.53■□□□□ 0.24
CALCOCO1-209ENST00000548177 CPS1P31327 1500 aa16.52■□□□□ 0.24
CALCOCO1-209ENST00000548177 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
CALCOCO1-209ENST00000548177 ANKLE2Q86XL3 938 aa16.52■□□□□ 0.24
CALCOCO1-209ENST00000548177 KIF3BO15066 747 aa16.51■□□□□ 0.23
CALCOCO1-209ENST00000548177 TNRQ92752 1358 aa16.51■□□□□ 0.23
CALCOCO1-209ENST00000548177 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
CALCOCO1-209ENST00000548177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.5■□□□□ 0.23
CALCOCO1-209ENST00000548177 NEURL4Q96JN8 1562 aa16.49■□□□□ 0.23
CALCOCO1-209ENST00000548177 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
CALCOCO1-209ENST00000548177 WASHC2CQ9Y4E1 1318 aa16.47■□□□□ 0.23
CALCOCO1-209ENST00000548177 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.23
CALCOCO1-209ENST00000548177 VWDEQ8N2E2 1590 aa16.43■□□□□ 0.22
CALCOCO1-209ENST00000548177 RTEL1-TNFRSF6BF6WH68 1400 aa16.43■□□□□ 0.22
CALCOCO1-209ENST00000548177 NPHP4O75161 1426 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO1-209ENST00000548177 PZPP20742 1482 aa16.42■□□□□ 0.22
CALCOCO1-209ENST00000548177 MBD5Q9P267 1494 aa16.42■□□□□ 0.22
CALCOCO1-209ENST00000548177 UGGT1Q9NYU2 1555 aa16.42■□□□□ 0.22
CALCOCO1-209ENST00000548177 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-209ENST00000548177 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
CALCOCO1-209ENST00000548177 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
CALCOCO1-209ENST00000548177 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
CALCOCO1-209ENST00000548177 FAM135AQ9P2D6 1515 aa16.4■□□□□ 0.22
CALCOCO1-209ENST00000548177 ALKQ9UM73 1620 aa16.4■□□□□ 0.22
CALCOCO1-209ENST00000548177 STRCP1A6NGW2 1772 aa16.39■□□□□ 0.21
CALCOCO1-209ENST00000548177 IQGAP1P46940 1657 aa16.39■□□□□ 0.21
CALCOCO1-209ENST00000548177 DEPDC5O75140 1603 aa16.38■□□□□ 0.21
CALCOCO1-209ENST00000548177 NLRP1Q9C000 1473 aa16.38■□□□□ 0.21
CALCOCO1-209ENST00000548177 MED14O60244 1454 aa16.37■□□□□ 0.21
CALCOCO1-209ENST00000548177 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
CALCOCO1-209ENST00000548177 CCDC141Q6ZP82 1450 aa16.35■□□□□ 0.21
CALCOCO1-209ENST00000548177 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
CALCOCO1-209ENST00000548177 TSPY4P0CV99 314 aa16.34■□□□□ 0.21
CALCOCO1-209ENST00000548177 TSPY10P0CW01 314 aa16.34■□□□□ 0.21
CALCOCO1-209ENST00000548177 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
CALCOCO1-209ENST00000548177 CAMSAP2Q08AD1 1489 aa16.32■□□□□ 0.2
CALCOCO1-209ENST00000548177 RNF17Q9BXT8 1623 aaKnown RBP16.32■□□□□ 0.2
CALCOCO1-209ENST00000548177 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
CALCOCO1-209ENST00000548177 CEP162Q5TB80 1403 aa16.31■□□□□ 0.2
CALCOCO1-209ENST00000548177 SYNMO15061 1565 aa16.29■□□□□ 0.2
CALCOCO1-209ENST00000548177 TXNDC2Q86VQ3 553 aa16.28■□□□□ 0.2
CALCOCO1-209ENST00000548177 NCOA2Q15596 1464 aa16.27■□□□□ 0.19
CALCOCO1-209ENST00000548177 ZC3H13Q5T200 1668 aaKnown RBP16.27■□□□□ 0.19
CALCOCO1-209ENST00000548177 XIRP1Q702N8 1843 aaKnown RBP16.26■□□□□ 0.19
CALCOCO1-209ENST00000548177 UBR1Q8IWV7 1749 aa16.25■□□□□ 0.19
CALCOCO1-209ENST00000548177 ABCC3O15438 1527 aa16.25■□□□□ 0.19
CALCOCO1-209ENST00000548177 LTKP29376 864 aa16.25■□□□□ 0.19
CALCOCO1-209ENST00000548177 CEP152O94986 1710 aa16.25■□□□□ 0.19
CALCOCO1-209ENST00000548177 ERVK-7P63135 1459 aa16.24■□□□□ 0.19
CALCOCO1-209ENST00000548177 SCAF11Q99590 1463 aaKnown RBP16.24■□□□□ 0.19
CALCOCO1-209ENST00000548177 ARHGEF5Q12774 1597 aa16.23■□□□□ 0.19
CALCOCO1-209ENST00000548177 POTEAQ6S8J7 498 aa16.23■□□□□ 0.19
CALCOCO1-209ENST00000548177 EID1Q9Y6B2 187 aa16.23■□□□□ 0.19
CALCOCO1-209ENST00000548177 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
CALCOCO1-209ENST00000548177 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
CALCOCO1-209ENST00000548177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.183e-6■□□□□ 8.2
CALCOCO1-209ENST00000548177 EIF2AK4Q9P2K8 1649 aaKnown RBP16.18■□□□□ 0.18
CALCOCO1-209ENST00000548177 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
CALCOCO1-209ENST00000548177 FAM135BQ49AJ0 1406 aa16.17■□□□□ 0.18
CALCOCO1-209ENST00000548177 MROH1Q8NDA8 1641 aa16.16■□□□□ 0.18
CALCOCO1-209ENST00000548177 SLIT1O75093 1534 aa16.16■□□□□ 0.18
CALCOCO1-209ENST00000548177 TMEM94Q12767 1356 aa16.15■□□□□ 0.18
CALCOCO1-209ENST00000548177 ROBO1Q9Y6N7 1651 aa16.15■□□□□ 0.18
CALCOCO1-209ENST00000548177 SLC26A8Q96RN1 970 aa16.15■□□□□ 0.18
CALCOCO1-209ENST00000548177 MAST1Q9Y2H9 1570 aa16.15■□□□□ 0.18
CALCOCO1-209ENST00000548177 ARHGAP23Q9P227 1491 aa16.15■□□□□ 0.18
CALCOCO1-209ENST00000548177 BCANQ96GW7 911 aa16.14■□□□□ 0.17
CALCOCO1-209ENST00000548177 PIK3C2BO00750 1634 aa16.14■□□□□ 0.17
CALCOCO1-209ENST00000548177 KCNA6P17658 529 aa16.13■□□□□ 0.17
CALCOCO1-209ENST00000548177 SETD1AO15047 1707 aaKnown RBP16.13■□□□□ 0.17
CALCOCO1-209ENST00000548177 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
CALCOCO1-209ENST00000548177 TMEM2Q9UHN6 1383 aa16.12■□□□□ 0.17
CALCOCO1-209ENST00000548177 DUOX2Q9NRD8 1548 aa16.1■□□□□ 0.17
CALCOCO1-209ENST00000548177 IDI1Q13907 227 aa16.09■□□□□ 0.17
CALCOCO1-209ENST00000548177 ARHGAP31Q2M1Z3 1444 aa16.09■□□□□ 0.17
CALCOCO1-209ENST00000548177 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
CALCOCO1-209ENST00000548177 PHLPP1O60346 1717 aa16.08■□□□□ 0.17
CALCOCO1-209ENST00000548177 KANK4Q5T7N3 995 aaPredicted RBP16.07■□□□□ 0.16
CALCOCO1-209ENST00000548177 SLAIN2Q9P270 581 aa16.07■□□□□ 0.16
CALCOCO1-209ENST00000548177 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
CALCOCO1-209ENST00000548177 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
CALCOCO1-209ENST00000548177 EFCAB6Q5THR3 1501 aa16.07■□□□□ 0.16
CALCOCO1-209ENST00000548177 MSH6P52701 1360 aa16.06■□□□□ 0.16
CALCOCO1-209ENST00000548177 KANK1Q14678 1352 aa16.06■□□□□ 0.16
CALCOCO1-209ENST00000548177 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
CALCOCO1-209ENST00000548177 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
CALCOCO1-209ENST00000548177 JCADQ9P266 1359 aa16.04■□□□□ 0.16
CALCOCO1-209ENST00000548177 MEX3CQ5U5Q3 659 aaKnown RBP16.04■□□□□ 0.16
CALCOCO1-209ENST00000548177 TET3O43151 1660 aa16.03■□□□□ 0.16
CALCOCO1-209ENST00000548177 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
CALCOCO1-209ENST00000548177 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.16
CALCOCO1-209ENST00000548177 C14orf37Q86TY3 774 aa16.02■□□□□ 0.16
CALCOCO1-209ENST00000548177 ERBINQ96RT1 1412 aa16.02■□□□□ 0.15
CALCOCO1-209ENST00000548177 CHIC2Q9UKJ5 165 aa16.01■□□□□ 0.15
CALCOCO1-209ENST00000548177 CROCC2H7BZ55 1655 aa16■□□□□ 0.15
CALCOCO1-209ENST00000548177 UPF1Q92900 1129 aaKnown RBP eCLIP16■□□□□ 0.15
CALCOCO1-209ENST00000548177 NKTRP30414 1462 aaKnown RBP15.99■□□□□ 0.15
CALCOCO1-209ENST00000548177 ABCC5O15440 1437 aa15.99■□□□□ 0.15
CALCOCO1-209ENST00000548177 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
CALCOCO1-209ENST00000548177 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms