RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 ATP10AO60312 1499 aa16.27■□□□□ 0.19
SCN8A-205ENST00000548086 PZPP20742 1482 aa16.27■□□□□ 0.19
SCN8A-205ENST00000548086 EIF2AK4Q9P2K8 1649 aaKnown RBP16.26■□□□□ 0.19
SCN8A-205ENST00000548086 MROH1Q8NDA8 1641 aa16.25■□□□□ 0.19
SCN8A-205ENST00000548086 DEPDC5O75140 1603 aa16.24■□□□□ 0.19
SCN8A-205ENST00000548086 FOXD1Q16676 465 aa16.24■□□□□ 0.19
SCN8A-205ENST00000548086 MPHOSPH9Q99550 1183 aa16.24■□□□□ 0.19
SCN8A-205ENST00000548086 GGT6Q6P531 493 aa16.23■□□□□ 0.19
SCN8A-205ENST00000548086 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
SCN8A-205ENST00000548086 KDM5DQ9BY66 1539 aa16.22■□□□□ 0.19
SCN8A-205ENST00000548086 FAM135AQ9P2D6 1515 aa16.22■□□□□ 0.19
SCN8A-205ENST00000548086 RNF17Q9BXT8 1623 aaKnown RBP16.21■□□□□ 0.19
SCN8A-205ENST00000548086 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
SCN8A-205ENST00000548086 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.19
SCN8A-205ENST00000548086 PRDM15P57071 1507 aaPredicted RBP16.21■□□□□ 0.19
SCN8A-205ENST00000548086 IQGAP3Q86VI3 1631 aa16.2■□□□□ 0.18
SCN8A-205ENST00000548086 MLECQ14165 292 aa16.18■□□□□ 0.18
SCN8A-205ENST00000548086 CEP152O94986 1710 aa16.18■□□□□ 0.18
SCN8A-205ENST00000548086 PKD2Q13563 968 aa16.18■□□□□ 0.18
SCN8A-205ENST00000548086 VWDEQ8N2E2 1590 aa16.17■□□□□ 0.18
SCN8A-205ENST00000548086 AGLP35573 1532 aa16.17■□□□□ 0.18
SCN8A-205ENST00000548086 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
SCN8A-205ENST00000548086 KANK1Q14678 1352 aa16.15■□□□□ 0.18
SCN8A-205ENST00000548086 SIN3AQ96ST3 1273 aa16.15■□□□□ 0.18
SCN8A-205ENST00000548086 ACIN1Q9UKV3 1341 aaKnown RBP16.15■□□□□ 0.18
SCN8A-205ENST00000548086 E9PCH4 1651 aa16.13■□□□□ 0.17
SCN8A-205ENST00000548086 ABCC3O15438 1527 aa16.13■□□□□ 0.17
SCN8A-205ENST00000548086 TET3O43151 1660 aa16.12■□□□□ 0.17
SCN8A-205ENST00000548086 WASHC2CQ9Y4E1 1318 aa16.12■□□□□ 0.17
SCN8A-205ENST00000548086 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
SCN8A-205ENST00000548086 ANKRD30BQ9BXX2 1392 aa16.1■□□□□ 0.17
SCN8A-205ENST00000548086 EFCAB6Q5THR3 1501 aa16.1■□□□□ 0.17
SCN8A-205ENST00000548086 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
SCN8A-205ENST00000548086 LMTK2Q8IWU2 1503 aa16.09■□□□□ 0.17
SCN8A-205ENST00000548086 CLSPNQ9HAW4 1339 aa16.09■□□□□ 0.17
SCN8A-205ENST00000548086 CLTCQ00610 1675 aaKnown RBP16.08■□□□□ 0.17
SCN8A-205ENST00000548086 CFAP65Q6ZU64 1925 aaKnown RBP16.08■□□□□ 0.16
SCN8A-205ENST00000548086 ZC3H13Q5T200 1668 aaKnown RBP16.07■□□□□ 0.16
SCN8A-205ENST00000548086 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
SCN8A-205ENST00000548086 NPATQ14207 1427 aa16.06■□□□□ 0.16
SCN8A-205ENST00000548086 SPHKAPQ2M3C7 1700 aa16.03■□□□□ 0.16
SCN8A-205ENST00000548086 UGGT1Q9NYU2 1555 aa16.02■□□□□ 0.15
SCN8A-205ENST00000548086 FER1L4A9Z1Z3 1794 aa16.01■□□□□ 0.15
SCN8A-205ENST00000548086 FBXO31Q5XUX0 539 aaPredicted RBP16■□□□□ 0.15
SCN8A-205ENST00000548086 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
SCN8A-205ENST00000548086 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
SCN8A-205ENST00000548086 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
SCN8A-205ENST00000548086 PTPRTO14522 1441 aa15.99■□□□□ 0.15
SCN8A-205ENST00000548086 TRPM2O94759 1503 aa15.99■□□□□ 0.15
SCN8A-205ENST00000548086 CCDC144AA2RUR9 1427 aa15.99■□□□□ 0.15
SCN8A-205ENST00000548086 CLTCL1P53675 1640 aa15.99■□□□□ 0.15
SCN8A-205ENST00000548086 MADDQ8WXG6 1647 aa15.99■□□□□ 0.15
SCN8A-205ENST00000548086 ARHGAP31Q2M1Z3 1444 aa15.98■□□□□ 0.15
SCN8A-205ENST00000548086 PREX1Q8TCU6 1659 aa15.98■□□□□ 0.15
SCN8A-205ENST00000548086 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
SCN8A-205ENST00000548086 ZMYM3Q14202 1370 aa15.98■□□□□ 0.15
SCN8A-205ENST00000548086 SYNMO15061 1565 aa15.97■□□□□ 0.15
SCN8A-205ENST00000548086 CEBPAP49715 358 aaPredicted RBP15.96■□□□□ 0.15
SCN8A-205ENST00000548086 NOS1P29475 1434 aa15.95■□□□□ 0.14
SCN8A-205ENST00000548086 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
SCN8A-205ENST00000548086 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
SCN8A-205ENST00000548086 ADAMTSL3P82987 1691 aa15.95■□□□□ 0.14
SCN8A-205ENST00000548086 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
SCN8A-205ENST00000548086 MROH2AA6NES4 1674 aa15.94■□□□□ 0.14
SCN8A-205ENST00000548086 CNTLNQ9NXG0 1405 aa15.94■□□□□ 0.14
SCN8A-205ENST00000548086 C3P01024 1663 aa15.94■□□□□ 0.14
SCN8A-205ENST00000548086 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
SCN8A-205ENST00000548086 RGL3Q3MIN7 710 aa15.92■□□□□ 0.14
SCN8A-205ENST00000548086 L3MBTL2Q969R5 705 aa15.92■□□□□ 0.14
SCN8A-205ENST00000548086 SPATA31D1Q6ZQQ2 1576 aa15.91■□□□□ 0.14
SCN8A-205ENST00000548086 PIK3C2BO00750 1634 aa15.9■□□□□ 0.14
SCN8A-205ENST00000548086 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
SCN8A-205ENST00000548086 CHGAP10645 457 aaKnown RBP15.89■□□□□ 0.13
SCN8A-205ENST00000548086 IDI1Q13907 227 aa15.89■□□□□ 0.13
SCN8A-205ENST00000548086 SPATA31E1Q6ZUB1 1445 aa15.88■□□□□ 0.13
SCN8A-205ENST00000548086 KIF1BO60333 1816 aa15.88■□□□□ 0.13
SCN8A-205ENST00000548086 MYO5BQ9ULV0 1848 aa15.86■□□□□ 0.13
SCN8A-205ENST00000548086 TNRQ92752 1358 aa15.85■□□□□ 0.13
SCN8A-205ENST00000548086 PPP1R15AO75807 674 aaPredicted RBP15.85■□□□□ 0.13
SCN8A-205ENST00000548086 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
SCN8A-205ENST00000548086 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
SCN8A-205ENST00000548086 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
SCN8A-205ENST00000548086 DCAF11Q8TEB1 546 aa15.84■□□□□ 0.13
SCN8A-205ENST00000548086 ZNF326Q5BKZ1 582 aaKnown RBP15.83■□□□□ 0.12
SCN8A-205ENST00000548086 SLC52A1Q9NWF4 448 aa15.83■□□□□ 0.12
SCN8A-205ENST00000548086 TMEM131LA2VDJ0 1609 aa15.82■□□□□ 0.12
SCN8A-205ENST00000548086 ZNF316A6NFI3 1004 aaPredicted RBP15.82■□□□□ 0.12
SCN8A-205ENST00000548086 PTPRMP28827 1452 aa15.82■□□□□ 0.12
SCN8A-205ENST00000548086 NBPF8Q3BBV2 869 aa15.82■□□□□ 0.12
SCN8A-205ENST00000548086 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
SCN8A-205ENST00000548086 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
SCN8A-205ENST00000548086 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
SCN8A-205ENST00000548086 IFT172Q9UG01 1749 aa15.78■□□□□ 0.12
SCN8A-205ENST00000548086 MYO3AQ8NEV4 1616 aa15.78■□□□□ 0.12
SCN8A-205ENST00000548086 NEURL4Q96JN8 1562 aa15.78■□□□□ 0.12
SCN8A-205ENST00000548086 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
SCN8A-205ENST00000548086 A2ML1A8K2U0 1454 aa15.77■□□□□ 0.12
SCN8A-205ENST00000548086 PPLO60437 1756 aa15.77■□□□□ 0.11
SCN8A-205ENST00000548086 UBR1Q8IWV7 1749 aa15.77■□□□□ 0.11
SCN8A-205ENST00000548086 NEXMIFQ5QGS0 1516 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms