RNA–Protein interactions for RNA: ENST00000548031.1

SCRN3-211, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-211ENST00000548031 CEP170BQ9Y4F5 1589 aaPredicted RBP18.42■□□□□ 0.54
SCRN3-211ENST00000548031 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
SCRN3-211ENST00000548031 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
SCRN3-211ENST00000548031 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
SCRN3-211ENST00000548031 SYCP2Q9BX26 1530 aa18.41■□□□□ 0.54
SCRN3-211ENST00000548031 PLXNC1O60486 1568 aa18.41■□□□□ 0.54
SCRN3-211ENST00000548031 ATP7AQ04656 1500 aa18.4■□□□□ 0.54
SCRN3-211ENST00000548031 ZNF777Q9ULD5 760 aaPredicted RBP18.39■□□□□ 0.53
SCRN3-211ENST00000548031 PTPRKQ15262 1439 aa18.39■□□□□ 0.53
SCRN3-211ENST00000548031 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.53
SCRN3-211ENST00000548031 PLEKHH2Q8IVE3 1493 aa18.39■□□□□ 0.53
SCRN3-211ENST00000548031 A2MP01023 1474 aa18.38■□□□□ 0.53
SCRN3-211ENST00000548031 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
SCRN3-211ENST00000548031 FYCO1Q9BQS8 1478 aa18.37■□□□□ 0.53
SCRN3-211ENST00000548031 GPATCH8Q9UKJ3 1502 aaKnown RBP18.37■□□□□ 0.53
SCRN3-211ENST00000548031 HNRNPMP52272 730 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCRN3-211ENST00000548031 ABCB7O75027 752 aa18.34■□□□□ 0.53
SCRN3-211ENST00000548031 GGT6Q6P531 493 aa18.33■□□□□ 0.52
SCRN3-211ENST00000548031 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.52
SCRN3-211ENST00000548031 ADGBQ8N7X0 1667 aa18.32■□□□□ 0.52
SCRN3-211ENST00000548031 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
SCRN3-211ENST00000548031 CFDP1Q9UEE9 299 aaPredicted RBP18.32■□□□□ 0.52
SCRN3-211ENST00000548031 CPS1P31327 1500 aa18.32■□□□□ 0.52
SCRN3-211ENST00000548031 DNMT1P26358 1616 aaKnown RBP18.31■□□□□ 0.52
SCRN3-211ENST00000548031 TOM1O60784 492 aa18.3■□□□□ 0.52
SCRN3-211ENST00000548031 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
SCRN3-211ENST00000548031 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
SCRN3-211ENST00000548031 APLP2Q06481 763 aa18.29■□□□□ 0.52
SCRN3-211ENST00000548031 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
SCRN3-211ENST00000548031 POLR1AO95602 1720 aaPredicted RBP18.28■□□□□ 0.52
SCRN3-211ENST00000548031 HSPA1LP34931 641 aa18.26■□□□□ 0.51
SCRN3-211ENST00000548031 FAM135AQ9P2D6 1515 aa18.25■□□□□ 0.51
SCRN3-211ENST00000548031 SHANK2Q9UPX8 1470 aa18.25■□□□□ 0.51
SCRN3-211ENST00000548031 RTEL1-TNFRSF6BF6WH68 1400 aa18.24■□□□□ 0.51
SCRN3-211ENST00000548031 PIP4K2BP78356 416 aa18.24■□□□□ 0.51
SCRN3-211ENST00000548031 NEURL4Q96JN8 1562 aa18.23■□□□□ 0.51
SCRN3-211ENST00000548031 MTUS2Q5JR59 1369 aa18.21■□□□□ 0.51
SCRN3-211ENST00000548031 DHX29Q7Z478 1369 aaKnown RBP18.21■□□□□ 0.51
SCRN3-211ENST00000548031 TNRQ92752 1358 aa18.21■□□□□ 0.51
SCRN3-211ENST00000548031 PZPP20742 1482 aa18.2■□□□□ 0.5
SCRN3-211ENST00000548031 KDM5DQ9BY66 1539 aa18.2■□□□□ 0.5
SCRN3-211ENST00000548031 MBD5Q9P267 1494 aa18.2■□□□□ 0.5
SCRN3-211ENST00000548031 ANKLE2Q86XL3 938 aa18.19■□□□□ 0.5
SCRN3-211ENST00000548031 THEMISQ8N1K5 641 aaPredicted RBP18.18■□□□□ 0.5
SCRN3-211ENST00000548031 DEPDC5O75140 1603 aa18.17■□□□□ 0.5
SCRN3-211ENST00000548031 MED14O60244 1454 aa18.17■□□□□ 0.5
SCRN3-211ENST00000548031 NLRP1Q9C000 1473 aa18.17■□□□□ 0.5
SCRN3-211ENST00000548031 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
SCRN3-211ENST00000548031 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
SCRN3-211ENST00000548031 FBXO31Q5XUX0 539 aaPredicted RBP18.15■□□□□ 0.5
SCRN3-211ENST00000548031 UGGT1Q9NYU2 1555 aa18.15■□□□□ 0.5
SCRN3-211ENST00000548031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.15■□□□□ 0.5
SCRN3-211ENST00000548031 EHBP1L1Q8N3D4 1523 aa18.14■□□□□ 0.49
SCRN3-211ENST00000548031 KIF3BO15066 747 aa18.14■□□□□ 0.49
SCRN3-211ENST00000548031 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
SCRN3-211ENST00000548031 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
SCRN3-211ENST00000548031 NPHP4O75161 1426 aaPredicted RBP18.14■□□□□ 0.49
SCRN3-211ENST00000548031 MIA2Q96PC5 1412 aa18.14■□□□□ 0.49
SCRN3-211ENST00000548031 RSPH4AQ5TD94 716 aa18.12■□□□□ 0.49
SCRN3-211ENST00000548031 ATF5Q9Y2D1 282 aaPredicted RBP18.12■□□□□ 0.49
SCRN3-211ENST00000548031 CCDC141Q6ZP82 1450 aa18.12■□□□□ 0.49
SCRN3-211ENST00000548031 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
SCRN3-211ENST00000548031 ALKQ9UM73 1620 aa18.11■□□□□ 0.49
SCRN3-211ENST00000548031 IQGAP1P46940 1657 aa18.1■□□□□ 0.49
SCRN3-211ENST00000548031 CEP162Q5TB80 1403 aa18.1■□□□□ 0.49
SCRN3-211ENST00000548031 SYNMO15061 1565 aa18.09■□□□□ 0.49
SCRN3-211ENST00000548031 RNF17Q9BXT8 1623 aaKnown RBP18.09■□□□□ 0.49
SCRN3-211ENST00000548031 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
SCRN3-211ENST00000548031 CAMSAP2Q08AD1 1489 aa18.05■□□□□ 0.48
SCRN3-211ENST00000548031 ZC3H13Q5T200 1668 aaKnown RBP18.05■□□□□ 0.48
SCRN3-211ENST00000548031 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.48
SCRN3-211ENST00000548031 ARHGEF5Q12774 1597 aa18.02■□□□□ 0.48
SCRN3-211ENST00000548031 TSPY4P0CV99 314 aa18.01■□□□□ 0.47
SCRN3-211ENST00000548031 TSPY10P0CW01 314 aa18.01■□□□□ 0.47
SCRN3-211ENST00000548031 ABCC3O15438 1527 aa17.99■□□□□ 0.47
SCRN3-211ENST00000548031 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
SCRN3-211ENST00000548031 NCOA2Q15596 1464 aa17.99■□□□□ 0.47
SCRN3-211ENST00000548031 ERVK-7P63135 1459 aa17.98■□□□□ 0.47
SCRN3-211ENST00000548031 EIF2AK4Q9P2K8 1649 aaKnown RBP17.98■□□□□ 0.47
SCRN3-211ENST00000548031 SCAF11Q99590 1463 aaKnown RBP17.96■□□□□ 0.47
SCRN3-211ENST00000548031 UBR1Q8IWV7 1749 aa17.95■□□□□ 0.46
SCRN3-211ENST00000548031 MAST1Q9Y2H9 1570 aa17.95■□□□□ 0.46
SCRN3-211ENST00000548031 SLIT1O75093 1534 aa17.93■□□□□ 0.46
SCRN3-211ENST00000548031 RGS17Q9UGC6 210 aaPredicted RBP17.92■□□□□ 0.46
SCRN3-211ENST00000548031 ARHGAP23Q9P227 1491 aa17.92■□□□□ 0.46
SCRN3-211ENST00000548031 FAM135BQ49AJ0 1406 aa17.9■□□□□ 0.46
SCRN3-211ENST00000548031 MROH1Q8NDA8 1641 aa17.9■□□□□ 0.46
SCRN3-211ENST00000548031 TXNDC2Q86VQ3 553 aa17.89■□□□□ 0.45
SCRN3-211ENST00000548031 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
SCRN3-211ENST00000548031 CEP152O94986 1710 aa17.88■□□□□ 0.45
SCRN3-211ENST00000548031 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
SCRN3-211ENST00000548031 ARHGAP31Q2M1Z3 1444 aa17.88■□□□□ 0.45
SCRN3-211ENST00000548031 LTKP29376 864 aa17.86■□□□□ 0.45
SCRN3-211ENST00000548031 CHRDL2Q6WN34 429 aa17.85■□□□□ 0.45
SCRN3-211ENST00000548031 DUOX2Q9NRD8 1548 aa17.85■□□□□ 0.45
SCRN3-211ENST00000548031 PRDM15P57071 1507 aaPredicted RBP17.83■□□□□ 0.45
SCRN3-211ENST00000548031 KDM5AP29375 1690 aaKnown RBP17.82■□□□□ 0.44
SCRN3-211ENST00000548031 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
SCRN3-211ENST00000548031 LRRC9Q6ZRR7 1453 aa17.82■□□□□ 0.44
SCRN3-211ENST00000548031 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms