RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
CALCOCO1-208ENST00000547988 MROH1Q8NDA8 1641 aa17.27■□□□□ 0.36
CALCOCO1-208ENST00000547988 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO1-208ENST00000547988 MLECQ14165 292 aa17.26■□□□□ 0.35
CALCOCO1-208ENST00000547988 CEP152O94986 1710 aa17.26■□□□□ 0.35
CALCOCO1-208ENST00000547988 C3P01024 1663 aa17.26■□□□□ 0.35
CALCOCO1-208ENST00000547988 KIF3BO15066 747 aa17.25■□□□□ 0.35
CALCOCO1-208ENST00000547988 CNTLNQ9NXG0 1405 aa17.24■□□□□ 0.35
CALCOCO1-208ENST00000547988 ANKRD50Q9ULJ7 1429 aa17.24■□□□□ 0.35
CALCOCO1-208ENST00000547988 KDM5DQ9BY66 1539 aa17.24■□□□□ 0.35
CALCOCO1-208ENST00000547988 UNC13BO14795 1591 aa17.23■□□□□ 0.35
CALCOCO1-208ENST00000547988 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
CALCOCO1-208ENST00000547988 PTPRMP28827 1452 aa17.23■□□□□ 0.35
CALCOCO1-208ENST00000547988 GGT6Q6P531 493 aa17.21■□□□□ 0.35
CALCOCO1-208ENST00000547988 CAMSAP1Q5T5Y3 1602 aa17.21■□□□□ 0.35
CALCOCO1-208ENST00000547988 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
CALCOCO1-208ENST00000547988 SETD1BQ9UPS6 1966 aaKnown RBP17.19■□□□□ 0.34
CALCOCO1-208ENST00000547988 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
CALCOCO1-208ENST00000547988 NAIPQ13075 1403 aa17.19■□□□□ 0.34
CALCOCO1-208ENST00000547988 VWDEQ8N2E2 1590 aa17.19■□□□□ 0.34
CALCOCO1-208ENST00000547988 ABCC3O15438 1527 aa17.18■□□□□ 0.34
CALCOCO1-208ENST00000547988 CFAP65Q6ZU64 1925 aaKnown RBP17.17■□□□□ 0.34
CALCOCO1-208ENST00000547988 IQGAP3Q86VI3 1631 aa17.17■□□□□ 0.34
CALCOCO1-208ENST00000547988 TET3O43151 1660 aa17.15■□□□□ 0.34
CALCOCO1-208ENST00000547988 KANK1Q14678 1352 aa17.15■□□□□ 0.34
CALCOCO1-208ENST00000547988 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
CALCOCO1-208ENST00000547988 LMTK2Q8IWU2 1503 aa17.14■□□□□ 0.33
CALCOCO1-208ENST00000547988 WASHC2CQ9Y4E1 1318 aa17.13■□□□□ 0.33
CALCOCO1-208ENST00000547988 ZMYM3Q14202 1370 aa17.12■□□□□ 0.33
CALCOCO1-208ENST00000547988 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
CALCOCO1-208ENST00000547988 PZPP20742 1482 aa17.11■□□□□ 0.33
CALCOCO1-208ENST00000547988 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
CALCOCO1-208ENST00000547988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.333e-6■□□□□ 8.2
CALCOCO1-208ENST00000547988 NPATQ14207 1427 aa17.09■□□□□ 0.33
CALCOCO1-208ENST00000547988 E9PCH4 1651 aa17.09■□□□□ 0.33
CALCOCO1-208ENST00000547988 MYO3AQ8NEV4 1616 aa17.07■□□□□ 0.32
CALCOCO1-208ENST00000547988 ARHGAP31Q2M1Z3 1444 aa17.07■□□□□ 0.32
CALCOCO1-208ENST00000547988 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
CALCOCO1-208ENST00000547988 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
CALCOCO1-208ENST00000547988 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
CALCOCO1-208ENST00000547988 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
CALCOCO1-208ENST00000547988 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
CALCOCO1-208ENST00000547988 NUP155O75694 1391 aa17.04■□□□□ 0.32
CALCOCO1-208ENST00000547988 ACIN1Q9UKV3 1341 aaKnown RBP17.04■□□□□ 0.32
CALCOCO1-208ENST00000547988 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
CALCOCO1-208ENST00000547988 SPHKAPQ2M3C7 1700 aa17.03■□□□□ 0.32
CALCOCO1-208ENST00000547988 ERVK-7P63135 1459 aa17.02■□□□□ 0.32
CALCOCO1-208ENST00000547988 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
CALCOCO1-208ENST00000547988 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
CALCOCO1-208ENST00000547988 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
CALCOCO1-208ENST00000547988 CEP170BQ9Y4F5 1589 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO1-208ENST00000547988 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
CALCOCO1-208ENST00000547988 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
CALCOCO1-208ENST00000547988 TNRQ92752 1358 aa16.98■□□□□ 0.31
CALCOCO1-208ENST00000547988 SYNMO15061 1565 aa16.98■□□□□ 0.31
CALCOCO1-208ENST00000547988 NLRP1Q9C000 1473 aa16.97■□□□□ 0.31
CALCOCO1-208ENST00000547988 PIK3C2BO00750 1634 aa16.96■□□□□ 0.31
CALCOCO1-208ENST00000547988 FBXO31Q5XUX0 539 aaPredicted RBP16.96■□□□□ 0.31
CALCOCO1-208ENST00000547988 TRIM52Q96A61 297 aa16.96■□□□□ 0.31
CALCOCO1-208ENST00000547988 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.3
CALCOCO1-208ENST00000547988 NOS1P29475 1434 aa16.96■□□□□ 0.3
CALCOCO1-208ENST00000547988 HRCP23327 699 aa16.95■□□□□ 0.3
CALCOCO1-208ENST00000547988 A2ML1A8K2U0 1454 aa16.94■□□□□ 0.3
CALCOCO1-208ENST00000547988 MYO5BQ9ULV0 1848 aa16.94■□□□□ 0.3
CALCOCO1-208ENST00000547988 KIF1BO60333 1816 aa16.92■□□□□ 0.3
CALCOCO1-208ENST00000547988 POLR1AO95602 1720 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO1-208ENST00000547988 TRPM2O94759 1503 aa16.91■□□□□ 0.3
CALCOCO1-208ENST00000547988 UGGT1Q9NYU2 1555 aa16.9■□□□□ 0.3
CALCOCO1-208ENST00000547988 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
CALCOCO1-208ENST00000547988 STRCQ7RTU9 1775 aa16.89■□□□□ 0.29
CALCOCO1-208ENST00000547988 PTPRTO14522 1441 aa16.88■□□□□ 0.29
CALCOCO1-208ENST00000547988 ADGRB3O60242 1522 aa16.88■□□□□ 0.29
CALCOCO1-208ENST00000547988 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
CALCOCO1-208ENST00000547988 CLTCL1P53675 1640 aa16.87■□□□□ 0.29
CALCOCO1-208ENST00000547988 TMEM131LA2VDJ0 1609 aa16.86■□□□□ 0.29
CALCOCO1-208ENST00000547988 PKD2Q13563 968 aa16.86■□□□□ 0.29
CALCOCO1-208ENST00000547988 SLC52A1Q9NWF4 448 aa16.86■□□□□ 0.29
CALCOCO1-208ENST00000547988 PLA2R1Q13018 1463 aa16.85■□□□□ 0.29
CALCOCO1-208ENST00000547988 HSPA2P54652 639 aa16.81■□□□□ 0.28
CALCOCO1-208ENST00000547988 IDI1Q13907 227 aa16.81■□□□□ 0.28
CALCOCO1-208ENST00000547988 SLIT1O75093 1534 aa16.8■□□□□ 0.28
CALCOCO1-208ENST00000547988 THEMISQ8N1K5 641 aaPredicted RBP16.8■□□□□ 0.28
CALCOCO1-208ENST00000547988 ARHGAP23Q9P227 1491 aa16.79■□□□□ 0.28
CALCOCO1-208ENST00000547988 FOXD1Q16676 465 aa16.77■□□□□ 0.28
CALCOCO1-208ENST00000547988 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
CALCOCO1-208ENST00000547988 CCDC144AA2RUR9 1427 aa16.77■□□□□ 0.27
CALCOCO1-208ENST00000547988 NEURL4Q96JN8 1562 aa16.77■□□□□ 0.27
CALCOCO1-208ENST00000547988 IQGAP1P46940 1657 aa16.76■□□□□ 0.27
CALCOCO1-208ENST00000547988 PPLO60437 1756 aa16.76■□□□□ 0.27
CALCOCO1-208ENST00000547988 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
CALCOCO1-208ENST00000547988 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
CALCOCO1-208ENST00000547988 TMEM2Q9UHN6 1383 aa16.74■□□□□ 0.27
CALCOCO1-208ENST00000547988 ANKRD30BQ9BXX2 1392 aa16.73■□□□□ 0.27
CALCOCO1-208ENST00000547988 MED14O60244 1454 aa16.73■□□□□ 0.27
CALCOCO1-208ENST00000547988 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
CALCOCO1-208ENST00000547988 ZFYVE9O95405 1425 aa16.71■□□□□ 0.27
CALCOCO1-208ENST00000547988 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.27
CALCOCO1-208ENST00000547988 ANKLE2Q86XL3 938 aa16.71■□□□□ 0.27
CALCOCO1-208ENST00000547988 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
CALCOCO1-208ENST00000547988 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms