RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 EIF2AK4Q9P2K8 1649 aaKnown RBP28.69■■■□□ 2.18
PRPF40B-206ENST00000547764 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.69■■■□□ 2.18
PRPF40B-206ENST00000547764 ADGRL2O95490 1459 aa28.69■■■□□ 2.18
PRPF40B-206ENST00000547764 LMTK3Q96Q04 1460 aa28.69■■■□□ 2.18
PRPF40B-206ENST00000547764 PTPRKQ15262 1439 aa28.69■■■□□ 2.18
PRPF40B-206ENST00000547764 ERBINQ96RT1 1412 aa28.68■■■□□ 2.18
PRPF40B-206ENST00000547764 WASHC2CQ9Y4E1 1318 aa28.67■■■□□ 2.18
PRPF40B-206ENST00000547764 RNF17Q9BXT8 1623 aaKnown RBP28.66■■■□□ 2.18
PRPF40B-206ENST00000547764 RRBP1Q9P2E9 1410 aaKnown RBP28.64■■■□□ 2.18
PRPF40B-206ENST00000547764 SETD1BQ9UPS6 1966 aaKnown RBP28.64■■■□□ 2.17
PRPF40B-206ENST00000547764 KDM5DQ9BY66 1539 aa28.64■■■□□ 2.17
PRPF40B-206ENST00000547764 FAM135AQ9P2D6 1515 aa28.64■■■□□ 2.17
PRPF40B-206ENST00000547764 ITGAEP38570 1179 aa28.63■■■□□ 2.17
PRPF40B-206ENST00000547764 NPATQ14207 1427 aa28.6■■■□□ 2.17
PRPF40B-206ENST00000547764 MROH1Q8NDA8 1641 aa28.6■■■□□ 2.17
PRPF40B-206ENST00000547764 PREX1Q8TCU6 1659 aa28.6■■■□□ 2.17
PRPF40B-206ENST00000547764 HSPA2P54652 639 aa28.59■■■□□ 2.17
PRPF40B-206ENST00000547764 UHRF1BP1Q6BDS2 1440 aa28.58■■■□□ 2.17
PRPF40B-206ENST00000547764 ROCK1Q13464 1354 aa28.57■■■□□ 2.16
PRPF40B-206ENST00000547764 ABCC3O15438 1527 aa28.55■■■□□ 2.16
PRPF40B-206ENST00000547764 ANKRD50Q9ULJ7 1429 aa28.54■■■□□ 2.16
PRPF40B-206ENST00000547764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.54■■■□□ 2.16
PRPF40B-206ENST00000547764 PRDM15P57071 1507 aaPredicted RBP28.53■■■□□ 2.16
PRPF40B-206ENST00000547764 FBXO31Q5XUX0 539 aaPredicted RBP28.52■■■□□ 2.16
PRPF40B-206ENST00000547764 PZPP20742 1482 aa28.52■■■□□ 2.16
PRPF40B-206ENST00000547764 ZC3H13Q5T200 1668 aaKnown RBP28.51■■■□□ 2.16
PRPF40B-206ENST00000547764 DEPDC5O75140 1603 aa28.51■■■□□ 2.15
PRPF40B-206ENST00000547764 CEP152O94986 1710 aa28.48■■■□□ 2.15
PRPF40B-206ENST00000547764 KANK1Q14678 1352 aa28.48■■■□□ 2.15
PRPF40B-206ENST00000547764 CAMSAP1Q5T5Y3 1602 aa28.43■■■□□ 2.14
PRPF40B-206ENST00000547764 TNRQ92752 1358 aa28.43■■■□□ 2.14
PRPF40B-206ENST00000547764 MYO3AQ8NEV4 1616 aa28.43■■■□□ 2.14
PRPF40B-206ENST00000547764 VWDEQ8N2E2 1590 aa28.42■■■□□ 2.14
PRPF40B-206ENST00000547764 ARHGAP31Q2M1Z3 1444 aa28.39■■■□□ 2.14
PRPF40B-206ENST00000547764 LMTK2Q8IWU2 1503 aa28.38■■■□□ 2.13
PRPF40B-206ENST00000547764 CEP170BQ9Y4F5 1589 aaPredicted RBP28.37■■■□□ 2.13
PRPF40B-206ENST00000547764 ZNF142P52746 1687 aaPredicted RBP28.36■■■□□ 2.13
PRPF40B-206ENST00000547764 ERVK-7P63135 1459 aa28.36■■■□□ 2.13
PRPF40B-206ENST00000547764 SPATA31D1Q6ZQQ2 1576 aa28.36■■■□□ 2.13
PRPF40B-206ENST00000547764 A2ML1A8K2U0 1454 aa28.34■■■□□ 2.13
PRPF40B-206ENST00000547764 CFAP65Q6ZU64 1925 aaKnown RBP28.34■■■□□ 2.13
PRPF40B-206ENST00000547764 UNC13BO14795 1591 aa28.33■■■□□ 2.13
PRPF40B-206ENST00000547764 NAIPQ13075 1403 aa28.31■■■□□ 2.12
PRPF40B-206ENST00000547764 NLRP1Q9C000 1473 aa28.31■■■□□ 2.12
PRPF40B-206ENST00000547764 STRCQ7RTU9 1775 aa28.31■■■□□ 2.12
PRPF40B-206ENST00000547764 EFCAB6Q5THR3 1501 aa28.28■■■□□ 2.12
PRPF40B-206ENST00000547764 HFM1A2PYH4 1435 aa28.26■■■□□ 2.12
PRPF40B-206ENST00000547764 NUP155O75694 1391 aa28.26■■■□□ 2.12
PRPF40B-206ENST00000547764 GCC2Q8IWJ2 1684 aa28.24■■■□□ 2.11
PRPF40B-206ENST00000547764 DMRT2Q9Y5R5 561 aa28.24■■■□□ 2.11
PRPF40B-206ENST00000547764 TET3O43151 1660 aa28.23■■■□□ 2.11
PRPF40B-206ENST00000547764 PLA2R1Q13018 1463 aa28.23■■■□□ 2.11
PRPF40B-206ENST00000547764 IQGAP3Q86VI3 1631 aa28.22■■■□□ 2.11
PRPF40B-206ENST00000547764 UGGT1Q9NYU2 1555 aa28.22■■■□□ 2.11
PRPF40B-206ENST00000547764 NCKAP5LQ9HCH0 1330 aa28.21■■■□□ 2.11
PRPF40B-206ENST00000547764 THEMISQ8N1K5 641 aaPredicted RBP28.21■■■□□ 2.11
PRPF40B-206ENST00000547764 RPRD2Q5VT52 1461 aaKnown RBP28.21■■■□□ 2.11
PRPF40B-206ENST00000547764 NOS1P29475 1434 aa28.19■■■□□ 2.1
PRPF40B-206ENST00000547764 PKD2Q13563 968 aa28.18■■■□□ 2.1
PRPF40B-206ENST00000547764 PTPRTO14522 1441 aa28.17■■■□□ 2.1
PRPF40B-206ENST00000547764 SYNMO15061 1565 aa28.16■■■□□ 2.1
PRPF40B-206ENST00000547764 IDI1Q13907 227 aa28.15■■■□□ 2.1
PRPF40B-206ENST00000547764 E9PCH4 1651 aa28.13■■■□□ 2.09
PRPF40B-206ENST00000547764 SLC52A1Q9NWF4 448 aa28.11■■■□□ 2.09
PRPF40B-206ENST00000547764 UBR1Q8IWV7 1749 aa28.11■■■□□ 2.09
PRPF40B-206ENST00000547764 ANKLE2Q86XL3 938 aa28.1■■■□□ 2.09
PRPF40B-206ENST00000547764 TRIM52Q96A61 297 aa28.1■■■□□ 2.09
PRPF40B-206ENST00000547764 PIK3C2BO00750 1634 aa28.1■■■□□ 2.09
PRPF40B-206ENST00000547764 STAG3Q9UJ98 1225 aa28.08■■■□□ 2.09
PRPF40B-206ENST00000547764 POLR1AO95602 1720 aaPredicted RBP28.05■■■□□ 2.08
PRPF40B-206ENST00000547764 NEURL4Q96JN8 1562 aa28.04■■■□□ 2.08
PRPF40B-206ENST00000547764 KDM5AP29375 1690 aaKnown RBP28.01■■■□□ 2.07
PRPF40B-206ENST00000547764 SLIT1O75093 1534 aa28.01■■■□□ 2.07
PRPF40B-206ENST00000547764 ARHGAP23Q9P227 1491 aa28.01■■■□□ 2.07
PRPF40B-206ENST00000547764 SETD5Q9C0A6 1442 aa28.01■■■□□ 2.07
PRPF40B-206ENST00000547764 TMEM2Q9UHN6 1383 aa27.99■■■□□ 2.07
PRPF40B-206ENST00000547764 ADGRB3O60242 1522 aa27.99■■■□□ 2.07
PRPF40B-206ENST00000547764 MED14O60244 1454 aa27.99■■■□□ 2.07
PRPF40B-206ENST00000547764 LTKP29376 864 aa27.98■■■□□ 2.07
PRPF40B-206ENST00000547764 TXNDC2Q86VQ3 553 aa27.98■■■□□ 2.07
PRPF40B-206ENST00000547764 SLC4A1APQ9BWU0 796 aaKnown RBP27.98■■■□□ 2.07
PRPF40B-206ENST00000547764 NPHP4O75161 1426 aaPredicted RBP27.98■■■□□ 2.07
PRPF40B-206ENST00000547764 SCAF11Q99590 1463 aaKnown RBP27.96■■■□□ 2.07
PRPF40B-206ENST00000547764 EID1Q9Y6B2 187 aa27.95■■■□□ 2.06
PRPF40B-206ENST00000547764 SPHKAPQ2M3C7 1700 aa27.94■■■□□ 2.06
PRPF40B-206ENST00000547764 CHGAP10645 457 aaKnown RBP27.93■■■□□ 2.06
PRPF40B-206ENST00000547764 CERKQ8TCT0 537 aa27.93■■■□□ 2.06
PRPF40B-206ENST00000547764 ZNF335Q9H4Z2 1342 aaPredicted RBP27.92■■■□□ 2.06
PRPF40B-206ENST00000547764 TMEM131LA2VDJ0 1609 aa27.92■■■□□ 2.06
PRPF40B-206ENST00000547764 RAB3GAP2Q9H2M9 1393 aa27.91■■■□□ 2.06
PRPF40B-206ENST00000547764 IQGAP1P46940 1657 aa27.91■■■□□ 2.06
PRPF40B-206ENST00000547764 LTBP4Q8N2S1 1624 aa27.9■■■□□ 2.06
PRPF40B-206ENST00000547764 MYO5BQ9ULV0 1848 aa27.9■■■□□ 2.06
PRPF40B-206ENST00000547764 ACIN1Q9UKV3 1341 aaKnown RBP27.9■■■□□ 2.06
PRPF40B-206ENST00000547764 MPHOSPH9Q99550 1183 aa27.89■■■□□ 2.06
PRPF40B-206ENST00000547764 TRPM2O94759 1503 aa27.87■■■□□ 2.05
PRPF40B-206ENST00000547764 FOXD1Q16676 465 aa27.86■■■□□ 2.05
PRPF40B-206ENST00000547764 ZFYVE9O95405 1425 aa27.84■■■□□ 2.05
PRPF40B-206ENST00000547764 RIMS2Q9UQ26 1411 aa27.84■■■□□ 2.05
PRPF40B-206ENST00000547764 CLTCL1P53675 1640 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms