RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 PREX1Q8TCU6 1659 aa35.9■■■■□ 3.34
CTDSP2-203ENST00000547701 NCOA1Q15788 1441 aa35.88■■■■□ 3.33
CTDSP2-203ENST00000547701 ERBINQ96RT1 1412 aa35.88■■■■□ 3.33
CTDSP2-203ENST00000547701 KIF15Q9NS87 1388 aa35.88■■■■□ 3.33
CTDSP2-203ENST00000547701 ANKRD30AQ9BXX3 1397 aa35.87■■■■□ 3.33
CTDSP2-203ENST00000547701 KDM5DQ9BY66 1539 aa35.84■■■■□ 3.33
CTDSP2-203ENST00000547701 FAM50AQ14320 339 aaKnown RBP35.83■■■■□ 3.33
CTDSP2-203ENST00000547701 MROH1Q8NDA8 1641 aa35.79■■■■□ 3.32
CTDSP2-203ENST00000547701 PTPRKQ15262 1439 aa35.78■■■■□ 3.32
CTDSP2-203ENST00000547701 UHRF1BP1Q6BDS2 1440 aa35.78■■■■□ 3.32
CTDSP2-203ENST00000547701 ZC3H13Q5T200 1668 aaKnown RBP35.78■■■■□ 3.32
CTDSP2-203ENST00000547701 PLPPR3Q6T4P5 718 aa35.77■■■■□ 3.32
CTDSP2-203ENST00000547701 RRP7BPQ9NSQ0 103 aa35.77■■■■□ 3.32
CTDSP2-203ENST00000547701 RRBP1Q9P2E9 1410 aaKnown RBP35.76■■■■□ 3.32
CTDSP2-203ENST00000547701 WASHC2CQ9Y4E1 1318 aa35.75■■■■□ 3.31
CTDSP2-203ENST00000547701 DEPDC5O75140 1603 aa35.74■■■■□ 3.31
CTDSP2-203ENST00000547701 ROCK1Q13464 1354 aa35.74■■■■□ 3.31
CTDSP2-203ENST00000547701 PZPP20742 1482 aa35.73■■■■□ 3.31
CTDSP2-203ENST00000547701 PRDM15P57071 1507 aaPredicted RBP35.73■■■■□ 3.31
CTDSP2-203ENST00000547701 CHIC2Q9UKJ5 165 aa35.71■■■■□ 3.31
CTDSP2-203ENST00000547701 ABCC3O15438 1527 aa35.7■■■■□ 3.31
CTDSP2-203ENST00000547701 PPARGC1BQ86YN6 1023 aaKnown RBP35.7■■■■□ 3.31
CTDSP2-203ENST00000547701 ZNF142P52746 1687 aaPredicted RBP35.62■■■■□ 3.29
CTDSP2-203ENST00000547701 HSPA2P54652 639 aa35.62■■■■□ 3.29
CTDSP2-203ENST00000547701 ANKRD50Q9ULJ7 1429 aa35.62■■■■□ 3.29
CTDSP2-203ENST00000547701 VWDEQ8N2E2 1590 aa35.62■■■■□ 3.29
CTDSP2-203ENST00000547701 ARHGAP31Q2M1Z3 1444 aa35.61■■■■□ 3.29
CTDSP2-203ENST00000547701 LMTK2Q8IWU2 1503 aa35.58■■■■□ 3.29
CTDSP2-203ENST00000547701 MYO3AQ8NEV4 1616 aa35.58■■■■□ 3.29
CTDSP2-203ENST00000547701 CEP152O94986 1710 aa35.56■■■■□ 3.28
CTDSP2-203ENST00000547701 CAMSAP1Q5T5Y3 1602 aa35.56■■■■□ 3.28
CTDSP2-203ENST00000547701 SPATA31D1Q6ZQQ2 1576 aa35.55■■■■□ 3.28
CTDSP2-203ENST00000547701 KANK1Q14678 1352 aa35.54■■■■□ 3.28
CTDSP2-203ENST00000547701 CEP170BQ9Y4F5 1589 aaPredicted RBP35.53■■■■□ 3.28
CTDSP2-203ENST00000547701 TNRQ92752 1358 aa35.52■■■■□ 3.28
CTDSP2-203ENST00000547701 STRCQ7RTU9 1775 aa35.52■■■■□ 3.28
CTDSP2-203ENST00000547701 FBXO31Q5XUX0 539 aaPredicted RBP35.52■■■■□ 3.28
CTDSP2-203ENST00000547701 A2ML1A8K2U0 1454 aa35.51■■■■□ 3.28
CTDSP2-203ENST00000547701 NLRP1Q9C000 1473 aa35.49■■■■□ 3.27
CTDSP2-203ENST00000547701 ERVK-7P63135 1459 aa35.47■■■■□ 3.27
CTDSP2-203ENST00000547701 PLA2R1Q13018 1463 aa35.47■■■■□ 3.27
CTDSP2-203ENST00000547701 DMRT2Q9Y5R5 561 aa35.45■■■■□ 3.27
CTDSP2-203ENST00000547701 UNC13BO14795 1591 aa35.45■■■■□ 3.27
CTDSP2-203ENST00000547701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.41■■■■□ 3.26
CTDSP2-203ENST00000547701 PTPRTO14522 1441 aa35.4■■■■□ 3.26
CTDSP2-203ENST00000547701 CFAP65Q6ZU64 1925 aaKnown RBP35.38■■■■□ 3.25
CTDSP2-203ENST00000547701 EFCAB6Q5THR3 1501 aa35.37■■■■□ 3.25
CTDSP2-203ENST00000547701 RPRD2Q5VT52 1461 aaKnown RBP35.37■■■■□ 3.25
CTDSP2-203ENST00000547701 ITGAEP38570 1179 aa35.37■■■■□ 3.25
CTDSP2-203ENST00000547701 PKD2Q13563 968 aa35.34■■■■□ 3.25
CTDSP2-203ENST00000547701 TET3O43151 1660 aa35.33■■■■□ 3.25
CTDSP2-203ENST00000547701 IQGAP3Q86VI3 1631 aa35.31■■■■□ 3.24
CTDSP2-203ENST00000547701 NOS1P29475 1434 aa35.31■■■■□ 3.24
CTDSP2-203ENST00000547701 UGGT1Q9NYU2 1555 aa35.3■■■■□ 3.24
CTDSP2-203ENST00000547701 THEMISQ8N1K5 641 aaPredicted RBP35.3■■■■□ 3.24
CTDSP2-203ENST00000547701 NAIPQ13075 1403 aa35.3■■■■□ 3.24
CTDSP2-203ENST00000547701 GCC2Q8IWJ2 1684 aa35.29■■■■□ 3.24
CTDSP2-203ENST00000547701 HFM1A2PYH4 1435 aa35.28■■■■□ 3.24
CTDSP2-203ENST00000547701 KDM5AP29375 1690 aaKnown RBP35.25■■■■□ 3.23
CTDSP2-203ENST00000547701 UBR1Q8IWV7 1749 aa35.21■■■■□ 3.23
CTDSP2-203ENST00000547701 NUP155O75694 1391 aa35.2■■■■□ 3.23
CTDSP2-203ENST00000547701 SYNMO15061 1565 aa35.19■■■■□ 3.22
CTDSP2-203ENST00000547701 SLC52A1Q9NWF4 448 aa35.18■■■■□ 3.22
CTDSP2-203ENST00000547701 POLR1AO95602 1720 aaPredicted RBP35.18■■■■□ 3.22
CTDSP2-203ENST00000547701 NCKAP5LQ9HCH0 1330 aa35.16■■■■□ 3.22
CTDSP2-203ENST00000547701 MED14O60244 1454 aa35.16■■■■□ 3.22
CTDSP2-203ENST00000547701 E9PCH4 1651 aa35.15■■■■□ 3.22
CTDSP2-203ENST00000547701 ANKLE2Q86XL3 938 aa35.14■■■■□ 3.22
CTDSP2-203ENST00000547701 SLIT1O75093 1534 aa35.13■■■■□ 3.21
CTDSP2-203ENST00000547701 ARHGAP23Q9P227 1491 aa35.13■■■■□ 3.21
CTDSP2-203ENST00000547701 NEURL4Q96JN8 1562 aa35.13■■■■□ 3.21
CTDSP2-203ENST00000547701 IDI1Q13907 227 aa35.12■■■■□ 3.21
CTDSP2-203ENST00000547701 PIK3C2BO00750 1634 aa35.12■■■■□ 3.21
CTDSP2-203ENST00000547701 ACIN1Q9UKV3 1341 aaKnown RBP35.05■■■■□ 3.2
CTDSP2-203ENST00000547701 LTBP4Q8N2S1 1624 aa35.03■■■■□ 3.2
CTDSP2-203ENST00000547701 ADGRB3O60242 1522 aa35.01■■■■□ 3.2
CTDSP2-203ENST00000547701 TMEM2Q9UHN6 1383 aa35.01■■■■□ 3.2
CTDSP2-203ENST00000547701 NPHP4O75161 1426 aaPredicted RBP34.98■■■■□ 3.19
CTDSP2-203ENST00000547701 SCAF11Q99590 1463 aaKnown RBP34.98■■■■□ 3.19
CTDSP2-203ENST00000547701 CERKQ8TCT0 537 aa34.98■■■■□ 3.19
CTDSP2-203ENST00000547701 IQGAP1P46940 1657 aa34.95■■■■□ 3.19
CTDSP2-203ENST00000547701 STAG3Q9UJ98 1225 aa34.94■■■■□ 3.18
CTDSP2-203ENST00000547701 TMEM131LA2VDJ0 1609 aa34.94■■■■□ 3.18
CTDSP2-203ENST00000547701 SPHKAPQ2M3C7 1700 aa34.93■■■■□ 3.18
CTDSP2-203ENST00000547701 IQSEC2Q5JU85 1478 aa34.93■■■■□ 3.18
CTDSP2-203ENST00000547701 LTKP29376 864 aa34.93■■■■□ 3.18
CTDSP2-203ENST00000547701 TXNDC2Q86VQ3 553 aa34.91■■■■□ 3.18
CTDSP2-203ENST00000547701 EID1Q9Y6B2 187 aa34.91■■■■□ 3.18
CTDSP2-203ENST00000547701 FBXO41Q8TF61 875 aa34.9■■■■□ 3.18
CTDSP2-203ENST00000547701 ZNF335Q9H4Z2 1342 aaPredicted RBP34.86■■■■□ 3.17
CTDSP2-203ENST00000547701 MYO5BQ9ULV0 1848 aa34.86■■■■□ 3.17
CTDSP2-203ENST00000547701 ZFYVE9O95405 1425 aa34.86■■■■□ 3.17
CTDSP2-203ENST00000547701 SETD5Q9C0A6 1442 aa34.86■■■■□ 3.17
CTDSP2-203ENST00000547701 ILDR1Q86SU0 546 aaPredicted RBP34.84■■■■□ 3.17
CTDSP2-203ENST00000547701 TRIM52Q96A61 297 aa34.84■■■■□ 3.17
CTDSP2-203ENST00000547701 TRPM2O94759 1503 aa34.84■■■■□ 3.17
CTDSP2-203ENST00000547701 HDGFP51858 240 aaKnown RBP34.82■■■■□ 3.16
CTDSP2-203ENST00000547701 CPS1P31327 1500 aa34.81■■■■□ 3.16
CTDSP2-203ENST00000547701 SLC4A1APQ9BWU0 796 aaKnown RBP34.8■■■■□ 3.16
CTDSP2-203ENST00000547701 HRCP23327 699 aa34.78■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms