RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 PLPPR3Q6T4P5 718 aa31.15■■■□□ 2.58
C12orf49-203ENST00000547630 PPP6R1Q9UPN7 881 aa31.13■■■□□ 2.57
C12orf49-203ENST00000547630 RNF17Q9BXT8 1623 aaKnown RBP31.12■■■□□ 2.57
C12orf49-203ENST00000547630 CNTLNQ9NXG0 1405 aa31.11■■■□□ 2.57
C12orf49-203ENST00000547630 ANKRD50Q9ULJ7 1429 aa31.11■■■□□ 2.57
C12orf49-203ENST00000547630 CLTCQ00610 1675 aaKnown RBP31.1■■■□□ 2.57
C12orf49-203ENST00000547630 CEBPAP49715 358 aaPredicted RBP31.08■■■□□ 2.57
C12orf49-203ENST00000547630 MROH1Q8NDA8 1641 aa31.07■■■□□ 2.56
C12orf49-203ENST00000547630 WASHC2CQ9Y4E1 1318 aa31.05■■■□□ 2.56
C12orf49-203ENST00000547630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.05■■■□□ 2.56
C12orf49-203ENST00000547630 KDM5DQ9BY66 1539 aa31.04■■■□□ 2.56
C12orf49-203ENST00000547630 MROH2AA6NES4 1674 aa31.04■■■□□ 2.56
C12orf49-203ENST00000547630 ZMYM3Q14202 1370 aa31.03■■■□□ 2.56
C12orf49-203ENST00000547630 C3P01024 1663 aa31.03■■■□□ 2.56
C12orf49-203ENST00000547630 FAM135AQ9P2D6 1515 aa31.02■■■□□ 2.56
C12orf49-203ENST00000547630 DEPDC5O75140 1603 aa31.02■■■□□ 2.56
C12orf49-203ENST00000547630 PRDM15P57071 1507 aaPredicted RBP31■■■□□ 2.55
C12orf49-203ENST00000547630 NAIPQ13075 1403 aa30.98■■■□□ 2.55
C12orf49-203ENST00000547630 ABCC3O15438 1527 aa30.98■■■□□ 2.55
C12orf49-203ENST00000547630 KANK1Q14678 1352 aa30.96■■■□□ 2.55
C12orf49-203ENST00000547630 ZC3H13Q5T200 1668 aaKnown RBP30.96■■■□□ 2.55
C12orf49-203ENST00000547630 CEP152O94986 1710 aa30.95■■■□□ 2.55
C12orf49-203ENST00000547630 GCC2Q8IWJ2 1684 aa30.95■■■□□ 2.55
C12orf49-203ENST00000547630 HFM1A2PYH4 1435 aa30.95■■■□□ 2.54
C12orf49-203ENST00000547630 VWDEQ8N2E2 1590 aa30.9■■■□□ 2.54
C12orf49-203ENST00000547630 UNC13BO14795 1591 aa30.9■■■□□ 2.54
C12orf49-203ENST00000547630 CAMSAP1Q5T5Y3 1602 aa30.88■■■□□ 2.53
C12orf49-203ENST00000547630 PZPP20742 1482 aa30.86■■■□□ 2.53
C12orf49-203ENST00000547630 FBXO31Q5XUX0 539 aaPredicted RBP30.85■■■□□ 2.53
C12orf49-203ENST00000547630 LMTK2Q8IWU2 1503 aa30.85■■■□□ 2.53
C12orf49-203ENST00000547630 NPATQ14207 1427 aa30.85■■■□□ 2.53
C12orf49-203ENST00000547630 NUP155O75694 1391 aa30.83■■■□□ 2.53
C12orf49-203ENST00000547630 SETD1BQ9UPS6 1966 aaKnown RBP30.82■■■□□ 2.52
C12orf49-203ENST00000547630 PREX1Q8TCU6 1659 aa30.8■■■□□ 2.52
C12orf49-203ENST00000547630 ARHGAP31Q2M1Z3 1444 aa30.79■■■□□ 2.52
C12orf49-203ENST00000547630 IQGAP3Q86VI3 1631 aa30.78■■■□□ 2.52
C12orf49-203ENST00000547630 UHRF1BP1Q6BDS2 1440 aa30.76■■■□□ 2.52
C12orf49-203ENST00000547630 LMTK3Q96Q04 1460 aa30.76■■■□□ 2.52
C12orf49-203ENST00000547630 CFAP65Q6ZU64 1925 aaKnown RBP30.76■■■□□ 2.51
C12orf49-203ENST00000547630 SETD5Q9C0A6 1442 aa30.76■■■□□ 2.51
C12orf49-203ENST00000547630 EFCAB6Q5THR3 1501 aa30.75■■■□□ 2.51
C12orf49-203ENST00000547630 TRIM52Q96A61 297 aa30.75■■■□□ 2.51
C12orf49-203ENST00000547630 TNRQ92752 1358 aa30.75■■■□□ 2.51
C12orf49-203ENST00000547630 TET3O43151 1660 aa30.75■■■□□ 2.51
C12orf49-203ENST00000547630 ERVK-7P63135 1459 aa30.73■■■□□ 2.51
C12orf49-203ENST00000547630 SPATA31D1Q6ZQQ2 1576 aa30.72■■■□□ 2.51
C12orf49-203ENST00000547630 MYO3AQ8NEV4 1616 aa30.7■■■□□ 2.5
C12orf49-203ENST00000547630 HSPA2P54652 639 aa30.67■■■□□ 2.5
C12orf49-203ENST00000547630 RAB3GAP2Q9H2M9 1393 aa30.65■■■□□ 2.5
C12orf49-203ENST00000547630 RPRD2Q5VT52 1461 aaKnown RBP30.65■■■□□ 2.5
C12orf49-203ENST00000547630 E9PCH4 1651 aa30.65■■■□□ 2.5
C12orf49-203ENST00000547630 CEP170BQ9Y4F5 1589 aaPredicted RBP30.62■■■□□ 2.49
C12orf49-203ENST00000547630 ZNF142P52746 1687 aaPredicted RBP30.61■■■□□ 2.49
C12orf49-203ENST00000547630 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
C12orf49-203ENST00000547630 NOS1P29475 1434 aa30.61■■■□□ 2.49
C12orf49-203ENST00000547630 A2ML1A8K2U0 1454 aa30.6■■■□□ 2.49
C12orf49-203ENST00000547630 NLRP1Q9C000 1473 aa30.6■■■□□ 2.49
C12orf49-203ENST00000547630 SLC4A1APQ9BWU0 796 aaKnown RBP30.58■■■□□ 2.49
C12orf49-203ENST00000547630 SYNMO15061 1565 aa30.57■■■□□ 2.48
C12orf49-203ENST00000547630 ACIN1Q9UKV3 1341 aaKnown RBP30.56■■■□□ 2.48
C12orf49-203ENST00000547630 PKD2Q13563 968 aa30.54■■■□□ 2.48
C12orf49-203ENST00000547630 UGGT1Q9NYU2 1555 aa30.51■■■□□ 2.48
C12orf49-203ENST00000547630 IDI1Q13907 227 aa30.51■■■□□ 2.47
C12orf49-203ENST00000547630 MPHOSPH9Q99550 1183 aa30.51■■■□□ 2.47
C12orf49-203ENST00000547630 HRCP23327 699 aa30.5■■■□□ 2.47
C12orf49-203ENST00000547630 SLC52A1Q9NWF4 448 aa30.48■■■□□ 2.47
C12orf49-203ENST00000547630 PIK3C2BO00750 1634 aa30.48■■■□□ 2.47
C12orf49-203ENST00000547630 SPHKAPQ2M3C7 1700 aa30.46■■■□□ 2.47
C12orf49-203ENST00000547630 THEMISQ8N1K5 641 aaPredicted RBP30.46■■■□□ 2.47
C12orf49-203ENST00000547630 PTPRTO14522 1441 aa30.45■■■□□ 2.46
C12orf49-203ENST00000547630 UBR1Q8IWV7 1749 aa30.44■■■□□ 2.46
C12orf49-203ENST00000547630 FOXD1Q16676 465 aa30.44■■■□□ 2.46
C12orf49-203ENST00000547630 STAG3Q9UJ98 1225 aa30.44■■■□□ 2.46
C12orf49-203ENST00000547630 PLA2R1Q13018 1463 aa30.41■■■□□ 2.46
C12orf49-203ENST00000547630 STRCQ7RTU9 1775 aa30.41■■■□□ 2.46
C12orf49-203ENST00000547630 NCKAP5LQ9HCH0 1330 aa30.38■■■□□ 2.45
C12orf49-203ENST00000547630 ADGRB3O60242 1522 aa30.37■■■□□ 2.45
C12orf49-203ENST00000547630 TRPM2O94759 1503 aa30.37■■■□□ 2.45
C12orf49-203ENST00000547630 CHGAP10645 457 aaKnown RBP30.36■■■□□ 2.45
C12orf49-203ENST00000547630 KDM5AP29375 1690 aaKnown RBP30.36■■■□□ 2.45
C12orf49-203ENST00000547630 CLTCL1P53675 1640 aa30.32■■■□□ 2.44
C12orf49-203ENST00000547630 ANKLE2Q86XL3 938 aa30.32■■■□□ 2.44
C12orf49-203ENST00000547630 TMEM131LA2VDJ0 1609 aa30.32■■■□□ 2.44
C12orf49-203ENST00000547630 MYO5BQ9ULV0 1848 aa30.31■■■□□ 2.44
C12orf49-203ENST00000547630 TMEM2Q9UHN6 1383 aa30.29■■■□□ 2.44
C12orf49-203ENST00000547630 ARHGAP23Q9P227 1491 aa30.29■■■□□ 2.44
C12orf49-203ENST00000547630 SLIT1O75093 1534 aa30.29■■■□□ 2.44
C12orf49-203ENST00000547630 DMRT2Q9Y5R5 561 aa30.28■■■□□ 2.44
C12orf49-203ENST00000547630 POLR1AO95602 1720 aaPredicted RBP30.28■■■□□ 2.44
C12orf49-203ENST00000547630 LTKP29376 864 aa30.25■■■□□ 2.43
C12orf49-203ENST00000547630 TXNDC2Q86VQ3 553 aa30.25■■■□□ 2.43
C12orf49-203ENST00000547630 NEURL4Q96JN8 1562 aa30.24■■■□□ 2.43
C12orf49-203ENST00000547630 EID1Q9Y6B2 187 aa30.24■■■□□ 2.43
C12orf49-203ENST00000547630 PCGF6Q9BYE7 350 aa30.23■■■□□ 2.43
C12orf49-203ENST00000547630 CCDC144AA2RUR9 1427 aa30.22■■■□□ 2.43
C12orf49-203ENST00000547630 KIF1BO60333 1816 aa30.22■■■□□ 2.43
C12orf49-203ENST00000547630 SCAF11Q99590 1463 aaKnown RBP30.22■■■□□ 2.43
C12orf49-203ENST00000547630 RIMS2Q9UQ26 1411 aa30.2■■■□□ 2.43
C12orf49-203ENST00000547630 ZNF326Q5BKZ1 582 aaKnown RBP30.19■■■□□ 2.42
C12orf49-203ENST00000547630 MED14O60244 1454 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms