RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 TCOF1Q13428 1488 aaKnown RBP29.03■■■□□ 2.24
CHMP1A-203ENST00000547614 ABCC5O15440 1437 aa29.03■■■□□ 2.24
CHMP1A-203ENST00000547614 SHANK2Q9UPX8 1470 aa29.02■■■□□ 2.24
CHMP1A-203ENST00000547614 EIF2AK4Q9P2K8 1649 aaKnown RBP28.99■■■□□ 2.23
CHMP1A-203ENST00000547614 PTPRTO14522 1441 aa28.99■■■□□ 2.23
CHMP1A-203ENST00000547614 NCOA1Q15788 1441 aa28.99■■■□□ 2.23
CHMP1A-203ENST00000547614 DUOX2Q9NRD8 1548 aa28.99■■■□□ 2.23
CHMP1A-203ENST00000547614 MYO3AQ8NEV4 1616 aa28.98■■■□□ 2.23
CHMP1A-203ENST00000547614 RNF17Q9BXT8 1623 aaKnown RBP28.98■■■□□ 2.23
CHMP1A-203ENST00000547614 PZPP20742 1482 aa28.97■■■□□ 2.23
CHMP1A-203ENST00000547614 DAPK1P53355 1430 aa28.97■■■□□ 2.23
CHMP1A-203ENST00000547614 ZNF142P52746 1687 aaPredicted RBP28.96■■■□□ 2.23
CHMP1A-203ENST00000547614 CROCC2H7BZ55 1655 aa28.96■■■□□ 2.23
CHMP1A-203ENST00000547614 DNMT1P26358 1616 aaKnown RBP28.95■■■□□ 2.23
CHMP1A-203ENST00000547614 CAMSAP1Q5T5Y3 1602 aa28.95■■■□□ 2.23
CHMP1A-203ENST00000547614 KIF15Q9NS87 1388 aa28.95■■■□□ 2.22
CHMP1A-203ENST00000547614 CEP170BQ9Y4F5 1589 aaPredicted RBP28.95■■■□□ 2.22
CHMP1A-203ENST00000547614 FBXO31Q5XUX0 539 aaPredicted RBP28.94■■■□□ 2.22
CHMP1A-203ENST00000547614 CERKQ8TCT0 537 aa28.93■■■□□ 2.22
CHMP1A-203ENST00000547614 TNRQ92752 1358 aa28.92■■■□□ 2.22
CHMP1A-203ENST00000547614 RRP7BPQ9NSQ0 103 aa28.92■■■□□ 2.22
CHMP1A-203ENST00000547614 A2ML1A8K2U0 1454 aa28.91■■■□□ 2.22
CHMP1A-203ENST00000547614 PLA2R1Q13018 1463 aa28.91■■■□□ 2.22
CHMP1A-203ENST00000547614 ERBINQ96RT1 1412 aa28.9■■■□□ 2.22
CHMP1A-203ENST00000547614 ZC3H13Q5T200 1668 aaKnown RBP28.89■■■□□ 2.21
CHMP1A-203ENST00000547614 ABCC3O15438 1527 aa28.89■■■□□ 2.21
CHMP1A-203ENST00000547614 PKD2Q13563 968 aa28.88■■■□□ 2.21
CHMP1A-203ENST00000547614 ANKRD30AQ9BXX3 1397 aa28.88■■■□□ 2.21
CHMP1A-203ENST00000547614 MROH1Q8NDA8 1641 aa28.87■■■□□ 2.21
CHMP1A-203ENST00000547614 NCKAP5LQ9HCH0 1330 aa28.85■■■□□ 2.21
CHMP1A-203ENST00000547614 CHIC2Q9UKJ5 165 aa28.84■■■□□ 2.21
CHMP1A-203ENST00000547614 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
CHMP1A-203ENST00000547614 NLRP1Q9C000 1473 aa28.82■■■□□ 2.2
CHMP1A-203ENST00000547614 PRDM15P57071 1507 aaPredicted RBP28.79■■■□□ 2.2
CHMP1A-203ENST00000547614 ADGRL2O95490 1459 aa28.78■■■□□ 2.2
CHMP1A-203ENST00000547614 SPATA31D1Q6ZQQ2 1576 aa28.77■■■□□ 2.2
CHMP1A-203ENST00000547614 THEMISQ8N1K5 641 aaPredicted RBP28.77■■■□□ 2.2
CHMP1A-203ENST00000547614 CEP152O94986 1710 aa28.75■■■□□ 2.19
CHMP1A-203ENST00000547614 DEPDC5O75140 1603 aa28.75■■■□□ 2.19
CHMP1A-203ENST00000547614 ARHGAP31Q2M1Z3 1444 aa28.75■■■□□ 2.19
CHMP1A-203ENST00000547614 KANK1Q14678 1352 aa28.75■■■□□ 2.19
CHMP1A-203ENST00000547614 ERVK-7P63135 1459 aa28.74■■■□□ 2.19
CHMP1A-203ENST00000547614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.73■■■□□ 2.192e-6■■□□□ 11.4
CHMP1A-203ENST00000547614 LTBP4Q8N2S1 1624 aa28.72■■■□□ 2.19
CHMP1A-203ENST00000547614 UGGT1Q9NYU2 1555 aa28.72■■■□□ 2.19
CHMP1A-203ENST00000547614 ANKLE2Q86XL3 938 aa28.69■■■□□ 2.18
CHMP1A-203ENST00000547614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.69■■■□□ 2.183e-6■■■■□ 26.4
CHMP1A-203ENST00000547614 LMTK2Q8IWU2 1503 aa28.66■■■□□ 2.18
CHMP1A-203ENST00000547614 ANKRD50Q9ULJ7 1429 aa28.66■■■□□ 2.18
CHMP1A-203ENST00000547614 VWDEQ8N2E2 1590 aa28.66■■■□□ 2.18
CHMP1A-203ENST00000547614 CFAP65Q6ZU64 1925 aaKnown RBP28.65■■■□□ 2.18
CHMP1A-203ENST00000547614 ZNF335Q9H4Z2 1342 aaPredicted RBP28.65■■■□□ 2.18
CHMP1A-203ENST00000547614 POLR1AO95602 1720 aaPredicted RBP28.64■■■□□ 2.18
CHMP1A-203ENST00000547614 IQSEC2Q5JU85 1478 aa28.64■■■□□ 2.17
CHMP1A-203ENST00000547614 NEURL4Q96JN8 1562 aa28.62■■■□□ 2.17
CHMP1A-203ENST00000547614 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
CHMP1A-203ENST00000547614 ROCK1Q13464 1354 aa28.61■■■□□ 2.17
CHMP1A-203ENST00000547614 MED14O60244 1454 aa28.59■■■□□ 2.17
CHMP1A-203ENST00000547614 NPHP4O75161 1426 aaPredicted RBP28.55■■■□□ 2.16
CHMP1A-203ENST00000547614 UBR1Q8IWV7 1749 aa28.55■■■□□ 2.16
CHMP1A-203ENST00000547614 EFCAB6Q5THR3 1501 aa28.53■■■□□ 2.16
CHMP1A-203ENST00000547614 NOS1P29475 1434 aa28.5■■■□□ 2.15
CHMP1A-203ENST00000547614 RPRD2Q5VT52 1461 aaKnown RBP28.49■■■□□ 2.15
CHMP1A-203ENST00000547614 SLIT1O75093 1534 aa28.48■■■□□ 2.15
CHMP1A-203ENST00000547614 ARHGAP23Q9P227 1491 aa28.48■■■□□ 2.15
CHMP1A-203ENST00000547614 ITGAEP38570 1179 aa28.48■■■□□ 2.15
CHMP1A-203ENST00000547614 IDI1Q13907 227 aa28.48■■■□□ 2.15
CHMP1A-203ENST00000547614 IQGAP1P46940 1657 aa28.46■■■□□ 2.15
CHMP1A-203ENST00000547614 SLC52A1Q9NWF4 448 aa28.46■■■□□ 2.15
CHMP1A-203ENST00000547614 STAG3Q9UJ98 1225 aa28.46■■■□□ 2.15
CHMP1A-203ENST00000547614 PIK3C2BO00750 1634 aa28.46■■■□□ 2.15
CHMP1A-203ENST00000547614 SCAF11Q99590 1463 aaKnown RBP28.46■■■□□ 2.15
CHMP1A-203ENST00000547614 UNC13BO14795 1591 aa28.45■■■□□ 2.15
CHMP1A-203ENST00000547614 CPS1P31327 1500 aa28.45■■■□□ 2.15
CHMP1A-203ENST00000547614 TXNDC2Q86VQ3 553 aa28.45■■■□□ 2.14
CHMP1A-203ENST00000547614 KDM5AP29375 1690 aaKnown RBP28.45■■■□□ 2.14
CHMP1A-203ENST00000547614 RRBP1Q9P2E9 1410 aaKnown RBP28.44■■■□□ 2.14
CHMP1A-203ENST00000547614 LTKP29376 864 aa28.44■■■□□ 2.14
CHMP1A-203ENST00000547614 EID1Q9Y6B2 187 aa28.44■■■□□ 2.14
CHMP1A-203ENST00000547614 SYNMO15061 1565 aa28.44■■■□□ 2.14
CHMP1A-203ENST00000547614 TET3O43151 1660 aa28.44■■■□□ 2.14
CHMP1A-203ENST00000547614 TMEM2Q9UHN6 1383 aa28.42■■■□□ 2.14
CHMP1A-203ENST00000547614 UBAP1LF5GYI3 381 aa28.38■■■□□ 2.13
CHMP1A-203ENST00000547614 GCC2Q8IWJ2 1684 aa28.38■■■□□ 2.13
CHMP1A-203ENST00000547614 NUP155O75694 1391 aa28.36■■■□□ 2.13
CHMP1A-203ENST00000547614 IQGAP3Q86VI3 1631 aa28.35■■■□□ 2.13
CHMP1A-203ENST00000547614 ADGRB3O60242 1522 aa28.33■■■□□ 2.13
CHMP1A-203ENST00000547614 E9PCH4 1651 aa28.29■■■□□ 2.12
CHMP1A-203ENST00000547614 TOM1O60784 492 aa28.28■■■□□ 2.12
CHMP1A-203ENST00000547614 STRCP1A6NGW2 1772 aa28.26■■■□□ 2.11
CHMP1A-203ENST00000547614 HDGFP51858 240 aaKnown RBP28.25■■■□□ 2.11
CHMP1A-203ENST00000547614 LRRC7Q96NW7 1537 aa28.24■■■□□ 2.11
CHMP1A-203ENST00000547614 NAIPQ13075 1403 aa28.23■■■□□ 2.11
CHMP1A-203ENST00000547614 TMEM131LA2VDJ0 1609 aa28.22■■■□□ 2.11
CHMP1A-203ENST00000547614 ZFYVE9O95405 1425 aa28.2■■■□□ 2.11
CHMP1A-203ENST00000547614 SLC26A8Q96RN1 970 aa28.18■■■□□ 2.1
CHMP1A-203ENST00000547614 RIMS2Q9UQ26 1411 aa28.18■■■□□ 2.1
CHMP1A-203ENST00000547614 CHGAP10645 457 aaKnown RBP28.17■■■□□ 2.1
CHMP1A-203ENST00000547614 MYO5BQ9ULV0 1848 aa28.17■■■□□ 2.1
CHMP1A-203ENST00000547614 HFM1A2PYH4 1435 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms