RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 UNC13BO14795 1591 aa32.26■■■□□ 2.75
RBFOX1-210ENST00000547605 EIF2AK4Q9P2K8 1649 aaKnown RBP32.26■■■□□ 2.75
RBFOX1-210ENST00000547605 ZEB1P37275 1124 aaPredicted RBP32.25■■■□□ 2.75
RBFOX1-210ENST00000547605 PZPP20742 1482 aa32.24■■■□□ 2.75
RBFOX1-210ENST00000547605 KDM5DQ9BY66 1539 aa32.22■■■□□ 2.75
RBFOX1-210ENST00000547605 ATP10AO60312 1499 aa32.21■■■□□ 2.75
RBFOX1-210ENST00000547605 FAM135AQ9P2D6 1515 aa32.17■■■□□ 2.74
RBFOX1-210ENST00000547605 DEPDC5O75140 1603 aa32.16■■■□□ 2.74
RBFOX1-210ENST00000547605 FOXD1Q16676 465 aa32.16■■■□□ 2.74
RBFOX1-210ENST00000547605 ARHGEF40Q8TER5 1519 aa32.15■■■□□ 2.74
RBFOX1-210ENST00000547605 PKD2Q13563 968 aa32.14■■■□□ 2.74
RBFOX1-210ENST00000547605 KANK1Q14678 1352 aa32.14■■■□□ 2.74
RBFOX1-210ENST00000547605 IQGAP3Q86VI3 1631 aa32.14■■■□□ 2.74
RBFOX1-210ENST00000547605 GGT6Q6P531 493 aa32.12■■■□□ 2.73
RBFOX1-210ENST00000547605 BCORL1Q5H9F3 1711 aa32.1■■■□□ 2.73
RBFOX1-210ENST00000547605 RNF17Q9BXT8 1623 aaKnown RBP32.1■■■□□ 2.73
RBFOX1-210ENST00000547605 PRDM15P57071 1507 aaPredicted RBP32.08■■■□□ 2.73
RBFOX1-210ENST00000547605 REREQ9P2R6 1566 aa32.08■■■□□ 2.73
RBFOX1-210ENST00000547605 SIN3AQ96ST3 1273 aa32.07■■■□□ 2.73
RBFOX1-210ENST00000547605 MROH1Q8NDA8 1641 aa32.07■■■□□ 2.72
RBFOX1-210ENST00000547605 NEUROD1Q13562 356 aa32.07■■■□□ 2.72
RBFOX1-210ENST00000547605 VWDEQ8N2E2 1590 aa32.02■■■□□ 2.72
RBFOX1-210ENST00000547605 AGLP35573 1532 aa32■■■□□ 2.71
RBFOX1-210ENST00000547605 ANKRD30BQ9BXX2 1392 aa32■■■□□ 2.71
RBFOX1-210ENST00000547605 WASHC2CQ9Y4E1 1318 aa31.97■■■□□ 2.71
RBFOX1-210ENST00000547605 SIGLEC1Q9BZZ2 1709 aa31.97■■■□□ 2.71
RBFOX1-210ENST00000547605 TET3O43151 1660 aa31.97■■■□□ 2.71
RBFOX1-210ENST00000547605 ARID4BQ4LE39 1312 aaPredicted RBP31.96■■■□□ 2.71
RBFOX1-210ENST00000547605 CEP152O94986 1710 aa31.96■■■□□ 2.71
RBFOX1-210ENST00000547605 MLECQ14165 292 aa31.93■■■□□ 2.7
RBFOX1-210ENST00000547605 E9PCH4 1651 aa31.91■■■□□ 2.7
RBFOX1-210ENST00000547605 LMTK2Q8IWU2 1503 aa31.91■■■□□ 2.7
RBFOX1-210ENST00000547605 ABCC3O15438 1527 aa31.89■■■□□ 2.7
RBFOX1-210ENST00000547605 EFCAB6Q5THR3 1501 aa31.87■■■□□ 2.69
RBFOX1-210ENST00000547605 ZC3H13Q5T200 1668 aaKnown RBP31.85■■■□□ 2.69
RBFOX1-210ENST00000547605 PPP6R1Q9UPN7 881 aa31.85■■■□□ 2.69
RBFOX1-210ENST00000547605 TONSLQ96HA7 1378 aa31.85■■■□□ 2.69
RBFOX1-210ENST00000547605 CAMSAP1Q5T5Y3 1602 aa31.82■■■□□ 2.68
RBFOX1-210ENST00000547605 RPRD2Q5VT52 1461 aaKnown RBP31.82■■■□□ 2.68
RBFOX1-210ENST00000547605 TIMELESSQ9UNS1 1208 aa31.81■■■□□ 2.68
RBFOX1-210ENST00000547605 PLA2R1Q13018 1463 aa31.8■■■□□ 2.68
RBFOX1-210ENST00000547605 ESF1Q9H501 851 aaKnown RBP31.79■■■□□ 2.68
RBFOX1-210ENST00000547605 CCDC144AA2RUR9 1427 aa31.79■■■□□ 2.68
RBFOX1-210ENST00000547605 SPHKAPQ2M3C7 1700 aa31.78■■■□□ 2.68
RBFOX1-210ENST00000547605 NPATQ14207 1427 aa31.77■■■□□ 2.68
RBFOX1-210ENST00000547605 CFAP65Q6ZU64 1925 aaKnown RBP31.76■■■□□ 2.67
RBFOX1-210ENST00000547605 CLTCQ00610 1675 aaKnown RBP31.75■■■□□ 2.67
RBFOX1-210ENST00000547605 PTPRTO14522 1441 aa31.74■■■□□ 2.67
RBFOX1-210ENST00000547605 TRPM2O94759 1503 aa31.72■■■□□ 2.67
RBFOX1-210ENST00000547605 ARHGAP31Q2M1Z3 1444 aa31.71■■■□□ 2.67
RBFOX1-210ENST00000547605 L3MBTL2Q969R5 705 aa31.66■■■□□ 2.66
RBFOX1-210ENST00000547605 CNTLNQ9NXG0 1405 aa31.63■■■□□ 2.65
RBFOX1-210ENST00000547605 PPP1R15AO75807 674 aaPredicted RBP31.63■■■□□ 2.65
RBFOX1-210ENST00000547605 CLTCL1P53675 1640 aa31.62■■■□□ 2.65
RBFOX1-210ENST00000547605 ZMYM3Q14202 1370 aa31.6■■■□□ 2.65
RBFOX1-210ENST00000547605 NOS1P29475 1434 aa31.6■■■□□ 2.65
RBFOX1-210ENST00000547605 RGL3Q3MIN7 710 aa31.59■■■□□ 2.65
RBFOX1-210ENST00000547605 UGGT1Q9NYU2 1555 aa31.59■■■□□ 2.65
RBFOX1-210ENST00000547605 PREX1Q8TCU6 1659 aa31.59■■■□□ 2.65
RBFOX1-210ENST00000547605 FBXO31Q5XUX0 539 aaPredicted RBP31.59■■■□□ 2.65
RBFOX1-210ENST00000547605 FER1L4A9Z1Z3 1794 aa31.57■■■□□ 2.64
RBFOX1-210ENST00000547605 ERVK-7P63135 1459 aa31.54■■■□□ 2.64
RBFOX1-210ENST00000547605 SYNMO15061 1565 aa31.54■■■□□ 2.64
RBFOX1-210ENST00000547605 MROH2AA6NES4 1674 aa31.53■■■□□ 2.64
RBFOX1-210ENST00000547605 KIF1BO60333 1816 aa31.52■■■□□ 2.64
RBFOX1-210ENST00000547605 CHGAP10645 457 aaKnown RBP31.51■■■□□ 2.63
RBFOX1-210ENST00000547605 DCAF11Q8TEB1 546 aa31.5■■■□□ 2.63
RBFOX1-210ENST00000547605 SPATA31E1Q6ZUB1 1445 aa31.5■■■□□ 2.63
RBFOX1-210ENST00000547605 KDM2AQ9Y2K7 1162 aa31.49■■■□□ 2.63
RBFOX1-210ENST00000547605 SLC52A1Q9NWF4 448 aa31.49■■■□□ 2.63
RBFOX1-210ENST00000547605 SPATA31D1Q6ZQQ2 1576 aa31.47■■■□□ 2.63
RBFOX1-210ENST00000547605 PIK3C2BO00750 1634 aa31.46■■■□□ 2.63
RBFOX1-210ENST00000547605 IDI1Q13907 227 aa31.46■■■□□ 2.63
RBFOX1-210ENST00000547605 PLPPR3Q6T4P5 718 aa31.45■■■□□ 2.63
RBFOX1-210ENST00000547605 ZNF326Q5BKZ1 582 aaKnown RBP31.45■■■□□ 2.62
RBFOX1-210ENST00000547605 MADDQ8WXG6 1647 aa31.44■■■□□ 2.62
RBFOX1-210ENST00000547605 CEBPAP49715 358 aaPredicted RBP31.44■■■□□ 2.62
RBFOX1-210ENST00000547605 C3P01024 1663 aa31.42■■■□□ 2.62
RBFOX1-210ENST00000547605 NEURL4Q96JN8 1562 aa31.41■■■□□ 2.62
RBFOX1-210ENST00000547605 ADAMTSL3P82987 1691 aa31.41■■■□□ 2.62
RBFOX1-210ENST00000547605 RIMS1Q86UR5 1692 aaKnown RBP31.4■■■□□ 2.62
RBFOX1-210ENST00000547605 ADGRB3O60242 1522 aa31.39■■■□□ 2.62
RBFOX1-210ENST00000547605 NBPF8Q3BBV2 869 aa31.39■■■□□ 2.62
RBFOX1-210ENST00000547605 TNRQ92752 1358 aa31.38■■■□□ 2.61
RBFOX1-210ENST00000547605 STAG3Q9UJ98 1225 aa31.36■■■□□ 2.61
RBFOX1-210ENST00000547605 UHRF1BP1Q6BDS2 1440 aa31.33■■■□□ 2.61
RBFOX1-210ENST00000547605 STAC3Q96MF2 364 aa31.31■■■□□ 2.6
RBFOX1-210ENST00000547605 TMEM131LA2VDJ0 1609 aa31.29■■■□□ 2.6
RBFOX1-210ENST00000547605 MYO5BQ9ULV0 1848 aa31.29■■■□□ 2.6
RBFOX1-210ENST00000547605 PRAG1Q86YV5 1406 aa31.28■■■□□ 2.6
RBFOX1-210ENST00000547605 RPGRIP1LQ68CZ1 1315 aa31.27■■■□□ 2.6
RBFOX1-210ENST00000547605 IFT172Q9UG01 1749 aa31.25■■■□□ 2.59
RBFOX1-210ENST00000547605 PPLO60437 1756 aa31.23■■■□□ 2.59
RBFOX1-210ENST00000547605 NLRP1Q9C000 1473 aa31.22■■■□□ 2.59
RBFOX1-210ENST00000547605 MYOM2P54296 1465 aa31.21■■■□□ 2.59
RBFOX1-210ENST00000547605 A2ML1A8K2U0 1454 aa31.2■■■□□ 2.58
RBFOX1-210ENST00000547605 NUTM2DQ5VT03 806 aaPredicted RBP31.19■■■□□ 2.58
RBFOX1-210ENST00000547605 ADGRF5Q8IZF2 1346 aa31.19■■■□□ 2.58
RBFOX1-210ENST00000547605 RALGAPBQ86X10 1494 aa31.19■■■□□ 2.58
RBFOX1-210ENST00000547605 ZNF316A6NFI3 1004 aaPredicted RBP31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms