RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 RIMS1Q86UR5 1692 aaKnown RBP31.44■■■□□ 2.62
GPN3-205ENST00000547323 MROH1Q8NDA8 1641 aa31.42■■■□□ 2.62
GPN3-205ENST00000547323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.41■■■□□ 2.62
GPN3-205ENST00000547323 GCC2Q8IWJ2 1684 aa31.4■■■□□ 2.62
GPN3-205ENST00000547323 HFM1A2PYH4 1435 aa31.4■■■□□ 2.62
GPN3-205ENST00000547323 ESF1Q9H501 851 aaKnown RBP31.38■■■□□ 2.61
GPN3-205ENST00000547323 PPP6R1Q9UPN7 881 aa31.37■■■□□ 2.61
GPN3-205ENST00000547323 DEPDC5O75140 1603 aa31.37■■■□□ 2.61
GPN3-205ENST00000547323 CLTCQ00610 1675 aaKnown RBP31.37■■■□□ 2.61
GPN3-205ENST00000547323 PLPPR3Q6T4P5 718 aa31.35■■■□□ 2.61
GPN3-205ENST00000547323 PTPRMP28827 1452 aa31.34■■■□□ 2.61
GPN3-205ENST00000547323 WASHC2CQ9Y4E1 1318 aa31.34■■■□□ 2.61
GPN3-205ENST00000547323 CEBPAP49715 358 aaPredicted RBP31.32■■■□□ 2.6
GPN3-205ENST00000547323 PRDM15P57071 1507 aaPredicted RBP31.31■■■□□ 2.6
GPN3-205ENST00000547323 TRIM26Q12899 539 aaPredicted RBP31.31■■■□□ 2.6
GPN3-205ENST00000547323 CNTLNQ9NXG0 1405 aa31.3■■■□□ 2.6
GPN3-205ENST00000547323 CEP152O94986 1710 aa31.29■■■□□ 2.6
GPN3-205ENST00000547323 ABCC3O15438 1527 aa31.29■■■□□ 2.6
GPN3-205ENST00000547323 KDM5DQ9BY66 1539 aa31.29■■■□□ 2.6
GPN3-205ENST00000547323 ZMYM3Q14202 1370 aa31.28■■■□□ 2.6
GPN3-205ENST00000547323 UNC13BO14795 1591 aa31.27■■■□□ 2.6
GPN3-205ENST00000547323 C3P01024 1663 aa31.26■■■□□ 2.6
GPN3-205ENST00000547323 KANK1Q14678 1352 aa31.26■■■□□ 2.59
GPN3-205ENST00000547323 MROH2AA6NES4 1674 aa31.25■■■□□ 2.59
GPN3-205ENST00000547323 SETD5Q9C0A6 1442 aa31.25■■■□□ 2.59
GPN3-205ENST00000547323 VWDEQ8N2E2 1590 aa31.25■■■□□ 2.59
GPN3-205ENST00000547323 FAM135AQ9P2D6 1515 aa31.23■■■□□ 2.59
GPN3-205ENST00000547323 NUP155O75694 1391 aa31.22■■■□□ 2.59
GPN3-205ENST00000547323 ZC3H13Q5T200 1668 aaKnown RBP31.22■■■□□ 2.59
GPN3-205ENST00000547323 CAMSAP1Q5T5Y3 1602 aa31.18■■■□□ 2.58
GPN3-205ENST00000547323 TRIM52Q96A61 297 aa31.18■■■□□ 2.58
GPN3-205ENST00000547323 CFAP65Q6ZU64 1925 aaKnown RBP31.17■■■□□ 2.58
GPN3-205ENST00000547323 RAB3GAP2Q9H2M9 1393 aa31.17■■■□□ 2.58
GPN3-205ENST00000547323 FBXO31Q5XUX0 539 aaPredicted RBP31.16■■■□□ 2.58
GPN3-205ENST00000547323 IQGAP3Q86VI3 1631 aa31.16■■■□□ 2.58
GPN3-205ENST00000547323 LMTK2Q8IWU2 1503 aa31.15■■■□□ 2.58
GPN3-205ENST00000547323 PZPP20742 1482 aa31.11■■■□□ 2.57
GPN3-205ENST00000547323 TET3O43151 1660 aa31.09■■■□□ 2.57
GPN3-205ENST00000547323 EFCAB6Q5THR3 1501 aa31.08■■■□□ 2.57
GPN3-205ENST00000547323 NPATQ14207 1427 aa31.07■■■□□ 2.57
GPN3-205ENST00000547323 ARHGAP31Q2M1Z3 1444 aa31.07■■■□□ 2.56
GPN3-205ENST00000547323 SETD1BQ9UPS6 1966 aaKnown RBP31.05■■■□□ 2.56
GPN3-205ENST00000547323 E9PCH4 1651 aa31.03■■■□□ 2.56
GPN3-205ENST00000547323 PREX1Q8TCU6 1659 aa31.02■■■□□ 2.56
GPN3-205ENST00000547323 HRCP23327 699 aa31.01■■■□□ 2.55
GPN3-205ENST00000547323 SLC4A1APQ9BWU0 796 aaKnown RBP31.01■■■□□ 2.55
GPN3-205ENST00000547323 ERVK-7P63135 1459 aa31.01■■■□□ 2.55
GPN3-205ENST00000547323 PCGF6Q9BYE7 350 aa30.99■■■□□ 2.55
GPN3-205ENST00000547323 SPATA31D1Q6ZQQ2 1576 aa30.98■■■□□ 2.55
GPN3-205ENST00000547323 TNRQ92752 1358 aa30.98■■■□□ 2.55
GPN3-205ENST00000547323 PKD2Q13563 968 aa30.97■■■□□ 2.55
GPN3-205ENST00000547323 MPHOSPH9Q99550 1183 aa30.97■■■□□ 2.55
GPN3-205ENST00000547323 RPRD2Q5VT52 1461 aaKnown RBP30.95■■■□□ 2.55
GPN3-205ENST00000547323 ACIN1Q9UKV3 1341 aaKnown RBP30.95■■■□□ 2.54
GPN3-205ENST00000547323 NOS1P29475 1434 aa30.92■■■□□ 2.54
GPN3-205ENST00000547323 FOXD1Q16676 465 aa30.92■■■□□ 2.54
GPN3-205ENST00000547323 MYO3AQ8NEV4 1616 aa30.91■■■□□ 2.54
GPN3-205ENST00000547323 SYNMO15061 1565 aa30.9■■■□□ 2.54
GPN3-205ENST00000547323 UHRF1BP1Q6BDS2 1440 aa30.9■■■□□ 2.54
GPN3-205ENST00000547323 LMTK3Q96Q04 1460 aa30.89■■■□□ 2.53
GPN3-205ENST00000547323 HSPA2P54652 639 aa30.84■■■□□ 2.53
GPN3-205ENST00000547323 SPHKAPQ2M3C7 1700 aa30.84■■■□□ 2.53
GPN3-205ENST00000547323 IDI1Q13907 227 aa30.83■■■□□ 2.53
GPN3-205ENST00000547323 PTPRTO14522 1441 aa30.82■■■□□ 2.52
GPN3-205ENST00000547323 UGGT1Q9NYU2 1555 aa30.82■■■□□ 2.52
GPN3-205ENST00000547323 CEP170BQ9Y4F5 1589 aaPredicted RBP30.82■■■□□ 2.52
GPN3-205ENST00000547323 PLA2R1Q13018 1463 aa30.82■■■□□ 2.52
GPN3-205ENST00000547323 NLRP1Q9C000 1473 aa30.82■■■□□ 2.52
GPN3-205ENST00000547323 A2ML1A8K2U0 1454 aa30.81■■■□□ 2.52
GPN3-205ENST00000547323 ZNF142P52746 1687 aaPredicted RBP30.8■■■□□ 2.52
GPN3-205ENST00000547323 PIK3C2BO00750 1634 aa30.77■■■□□ 2.52
GPN3-205ENST00000547323 SLC52A1Q9NWF4 448 aa30.77■■■□□ 2.52
GPN3-205ENST00000547323 TRPM2O94759 1503 aa30.73■■■□□ 2.51
GPN3-205ENST00000547323 UBR1Q8IWV7 1749 aa30.73■■■□□ 2.51
GPN3-205ENST00000547323 CLTCL1P53675 1640 aa30.71■■■□□ 2.51
GPN3-205ENST00000547323 STAG3Q9UJ98 1225 aa30.69■■■□□ 2.5
GPN3-205ENST00000547323 MYO5BQ9ULV0 1848 aa30.68■■■□□ 2.5
GPN3-205ENST00000547323 CHGAP10645 457 aaKnown RBP30.68■■■□□ 2.5
GPN3-205ENST00000547323 THEMISQ8N1K5 641 aaPredicted RBP30.68■■■□□ 2.5
GPN3-205ENST00000547323 TMEM131LA2VDJ0 1609 aa30.65■■■□□ 2.5
GPN3-205ENST00000547323 ANKRD30BQ9BXX2 1392 aa30.65■■■□□ 2.5
GPN3-205ENST00000547323 ADGRB3O60242 1522 aa30.64■■■□□ 2.5
GPN3-205ENST00000547323 DHX57Q6P158 1386 aaKnown RBP30.64■■■□□ 2.5
GPN3-205ENST00000547323 KDM5AP29375 1690 aaKnown RBP30.62■■■□□ 2.49
GPN3-205ENST00000547323 KIF1BO60333 1816 aa30.6■■■□□ 2.49
GPN3-205ENST00000547323 STRCQ7RTU9 1775 aa30.6■■■□□ 2.49
GPN3-205ENST00000547323 CCDC144AA2RUR9 1427 aa30.59■■■□□ 2.49
GPN3-205ENST00000547323 NCKAP5LQ9HCH0 1330 aa30.59■■■□□ 2.49
GPN3-205ENST00000547323 TMEM2Q9UHN6 1383 aa30.55■■■□□ 2.48
GPN3-205ENST00000547323 LTKP29376 864 aa30.54■■■□□ 2.48
GPN3-205ENST00000547323 ARHGAP23Q9P227 1491 aa30.54■■■□□ 2.48
GPN3-205ENST00000547323 SLIT1O75093 1534 aa30.53■■■□□ 2.48
GPN3-205ENST00000547323 ANKLE2Q86XL3 938 aa30.53■■■□□ 2.48
GPN3-205ENST00000547323 TXNDC2Q86VQ3 553 aa30.52■■■□□ 2.48
GPN3-205ENST00000547323 ZNF326Q5BKZ1 582 aaKnown RBP30.51■■■□□ 2.47
GPN3-205ENST00000547323 RGL3Q3MIN7 710 aa30.49■■■□□ 2.47
GPN3-205ENST00000547323 NUTM2DQ5VT03 806 aaPredicted RBP30.49■■■□□ 2.47
GPN3-205ENST00000547323 RIMS2Q9UQ26 1411 aa30.48■■■□□ 2.47
GPN3-205ENST00000547323 POLR1AO95602 1720 aaPredicted RBP30.48■■■□□ 2.47
GPN3-205ENST00000547323 ZFYVE9O95405 1425 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms