RNA–Protein interactions for RNA: ENST00000547268.1

PRDM4-203, Transcript of PR/SET domain 4, humanhuman

TSL 5

Gene PRDM4, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-203ENST00000547268 CHIC2Q9UKJ5 165 aa31.7■■■□□ 2.67
PRDM4-203ENST00000547268 ADGRL2O95490 1459 aa31.7■■■□□ 2.66
PRDM4-203ENST00000547268 EIF2AK4Q9P2K8 1649 aaKnown RBP31.69■■■□□ 2.66
PRDM4-203ENST00000547268 FAM135AQ9P2D6 1515 aa31.69■■■□□ 2.66
PRDM4-203ENST00000547268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.68■■■□□ 2.66
PRDM4-203ENST00000547268 CLTCQ00610 1675 aaKnown RBP31.68■■■□□ 2.66
PRDM4-203ENST00000547268 PTPRKQ15262 1439 aa31.67■■■□□ 2.66
PRDM4-203ENST00000547268 RNF17Q9BXT8 1623 aaKnown RBP31.67■■■□□ 2.66
PRDM4-203ENST00000547268 NPATQ14207 1427 aa31.66■■■□□ 2.66
PRDM4-203ENST00000547268 ERBINQ96RT1 1412 aa31.66■■■□□ 2.66
PRDM4-203ENST00000547268 KDM5DQ9BY66 1539 aa31.64■■■□□ 2.66
PRDM4-203ENST00000547268 WASHC2CQ9Y4E1 1318 aa31.62■■■□□ 2.65
PRDM4-203ENST00000547268 MROH1Q8NDA8 1641 aa31.61■■■□□ 2.65
PRDM4-203ENST00000547268 RRBP1Q9P2E9 1410 aaKnown RBP31.61■■■□□ 2.65
PRDM4-203ENST00000547268 HSPA2P54652 639 aa31.61■■■□□ 2.65
PRDM4-203ENST00000547268 PREX1Q8TCU6 1659 aa31.6■■■□□ 2.65
PRDM4-203ENST00000547268 SETD1BQ9UPS6 1966 aaKnown RBP31.59■■■□□ 2.65
PRDM4-203ENST00000547268 UHRF1BP1Q6BDS2 1440 aa31.58■■■□□ 2.65
PRDM4-203ENST00000547268 ABCC3O15438 1527 aa31.55■■■□□ 2.64
PRDM4-203ENST00000547268 ROCK1Q13464 1354 aa31.55■■■□□ 2.64
PRDM4-203ENST00000547268 PZPP20742 1482 aa31.53■■■□□ 2.64
PRDM4-203ENST00000547268 PRDM15P57071 1507 aaPredicted RBP31.52■■■□□ 2.64
PRDM4-203ENST00000547268 DEPDC5O75140 1603 aa31.49■■■□□ 2.63
PRDM4-203ENST00000547268 FBXO31Q5XUX0 539 aaPredicted RBP31.49■■■□□ 2.63
PRDM4-203ENST00000547268 ANKRD50Q9ULJ7 1429 aa31.49■■■□□ 2.63
PRDM4-203ENST00000547268 ZC3H13Q5T200 1668 aaKnown RBP31.48■■■□□ 2.63
PRDM4-203ENST00000547268 FBXO41Q8TF61 875 aa31.47■■■□□ 2.63
PRDM4-203ENST00000547268 ITGAEP38570 1179 aa31.45■■■□□ 2.63
PRDM4-203ENST00000547268 VWDEQ8N2E2 1590 aa31.43■■■□□ 2.62
PRDM4-203ENST00000547268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.42■■■□□ 2.62
PRDM4-203ENST00000547268 TNRQ92752 1358 aa31.41■■■□□ 2.62
PRDM4-203ENST00000547268 ARHGAP31Q2M1Z3 1444 aa31.41■■■□□ 2.62
PRDM4-203ENST00000547268 MYO3AQ8NEV4 1616 aa31.4■■■□□ 2.62
PRDM4-203ENST00000547268 KANK1Q14678 1352 aa31.39■■■□□ 2.62
PRDM4-203ENST00000547268 LMTK2Q8IWU2 1503 aa31.39■■■□□ 2.61
PRDM4-203ENST00000547268 CEP152O94986 1710 aa31.38■■■□□ 2.61
PRDM4-203ENST00000547268 CAMSAP1Q5T5Y3 1602 aa31.37■■■□□ 2.61
PRDM4-203ENST00000547268 ZNF142P52746 1687 aaPredicted RBP31.35■■■□□ 2.61
PRDM4-203ENST00000547268 SPATA31D1Q6ZQQ2 1576 aa31.35■■■□□ 2.61
PRDM4-203ENST00000547268 CEP170BQ9Y4F5 1589 aaPredicted RBP31.35■■■□□ 2.61
PRDM4-203ENST00000547268 A2ML1A8K2U0 1454 aa31.34■■■□□ 2.61
PRDM4-203ENST00000547268 ERVK-7P63135 1459 aa31.34■■■□□ 2.61
PRDM4-203ENST00000547268 NLRP1Q9C000 1473 aa31.3■■■□□ 2.6
PRDM4-203ENST00000547268 STRCQ7RTU9 1775 aa31.3■■■□□ 2.6
PRDM4-203ENST00000547268 UNC13BO14795 1591 aa31.27■■■□□ 2.6
PRDM4-203ENST00000547268 PLA2R1Q13018 1463 aa31.25■■■□□ 2.59
PRDM4-203ENST00000547268 EFCAB6Q5THR3 1501 aa31.24■■■□□ 2.59
PRDM4-203ENST00000547268 NAIPQ13075 1403 aa31.24■■■□□ 2.59
PRDM4-203ENST00000547268 DMRT2Q9Y5R5 561 aa31.23■■■□□ 2.59
PRDM4-203ENST00000547268 CERKQ8TCT0 537 aa31.2■■■□□ 2.59
PRDM4-203ENST00000547268 PTPRTO14522 1441 aa31.2■■■□□ 2.59
PRDM4-203ENST00000547268 HFM1A2PYH4 1435 aa31.18■■■□□ 2.58
PRDM4-203ENST00000547268 NOS1P29475 1434 aa31.18■■■□□ 2.58
PRDM4-203ENST00000547268 RPRD2Q5VT52 1461 aaKnown RBP31.17■■■□□ 2.58
PRDM4-203ENST00000547268 PKD2Q13563 968 aa31.17■■■□□ 2.58
PRDM4-203ENST00000547268 NCKAP5LQ9HCH0 1330 aa31.17■■■□□ 2.58
PRDM4-203ENST00000547268 UGGT1Q9NYU2 1555 aa31.17■■■□□ 2.58
PRDM4-203ENST00000547268 THEMISQ8N1K5 641 aaPredicted RBP31.16■■■□□ 2.58
PRDM4-203ENST00000547268 NUP155O75694 1391 aa31.16■■■□□ 2.58
PRDM4-203ENST00000547268 TET3O43151 1660 aa31.15■■■□□ 2.58
PRDM4-203ENST00000547268 IQGAP3Q86VI3 1631 aa31.13■■■□□ 2.57
PRDM4-203ENST00000547268 GCC2Q8IWJ2 1684 aa31.1■■■□□ 2.57
PRDM4-203ENST00000547268 SYNMO15061 1565 aa31.1■■■□□ 2.57
PRDM4-203ENST00000547268 CFAP65Q6ZU64 1925 aaKnown RBP31.1■■■□□ 2.57
PRDM4-203ENST00000547268 IDI1Q13907 227 aa31.08■■■□□ 2.57
PRDM4-203ENST00000547268 ANKLE2Q86XL3 938 aa31.04■■■□□ 2.56
PRDM4-203ENST00000547268 SLC52A1Q9NWF4 448 aa31.04■■■□□ 2.56
PRDM4-203ENST00000547268 UBR1Q8IWV7 1749 aa31.04■■■□□ 2.56
PRDM4-203ENST00000547268 NEURL4Q96JN8 1562 aa31.02■■■□□ 2.56
PRDM4-203ENST00000547268 E9PCH4 1651 aa31.02■■■□□ 2.56
PRDM4-203ENST00000547268 PIK3C2BO00750 1634 aa31.01■■■□□ 2.55
PRDM4-203ENST00000547268 ARHGAP23Q9P227 1491 aa31■■■□□ 2.55
PRDM4-203ENST00000547268 MED14O60244 1454 aa30.99■■■□□ 2.55
PRDM4-203ENST00000547268 SLIT1O75093 1534 aa30.98■■■□□ 2.55
PRDM4-203ENST00000547268 KDM5AP29375 1690 aaKnown RBP30.96■■■□□ 2.55
PRDM4-203ENST00000547268 POLR1AO95602 1720 aaPredicted RBP30.95■■■□□ 2.54
PRDM4-203ENST00000547268 TMEM2Q9UHN6 1383 aa30.94■■■□□ 2.54
PRDM4-203ENST00000547268 NPHP4O75161 1426 aaPredicted RBP30.92■■■□□ 2.54
PRDM4-203ENST00000547268 LTKP29376 864 aa30.92■■■□□ 2.54
PRDM4-203ENST00000547268 STAG3Q9UJ98 1225 aa30.92■■■□□ 2.54
PRDM4-203ENST00000547268 ADGRB3O60242 1522 aa30.92■■■□□ 2.54
PRDM4-203ENST00000547268 LTBP4Q8N2S1 1624 aa30.91■■■□□ 2.54
PRDM4-203ENST00000547268 SCAF11Q99590 1463 aaKnown RBP30.9■■■□□ 2.54
PRDM4-203ENST00000547268 TXNDC2Q86VQ3 553 aa30.89■■■□□ 2.54
PRDM4-203ENST00000547268 TRIM52Q96A61 297 aa30.89■■■□□ 2.54
PRDM4-203ENST00000547268 ZNF335Q9H4Z2 1342 aaPredicted RBP30.88■■■□□ 2.53
PRDM4-203ENST00000547268 SETD5Q9C0A6 1442 aa30.84■■■□□ 2.53
PRDM4-203ENST00000547268 EID1Q9Y6B2 187 aa30.84■■■□□ 2.53
PRDM4-203ENST00000547268 TMEM131LA2VDJ0 1609 aa30.84■■■□□ 2.53
PRDM4-203ENST00000547268 SLC4A1APQ9BWU0 796 aaKnown RBP30.82■■■□□ 2.52
PRDM4-203ENST00000547268 IQGAP1P46940 1657 aa30.81■■■□□ 2.52
PRDM4-203ENST00000547268 ZFYVE9O95405 1425 aa30.8■■■□□ 2.52
PRDM4-203ENST00000547268 SPHKAPQ2M3C7 1700 aa30.78■■■□□ 2.52
PRDM4-203ENST00000547268 ACIN1Q9UKV3 1341 aaKnown RBP30.77■■■□□ 2.52
PRDM4-203ENST00000547268 TRPM2O94759 1503 aa30.76■■■□□ 2.51
PRDM4-203ENST00000547268 RAB3GAP2Q9H2M9 1393 aa30.74■■■□□ 2.51
PRDM4-203ENST00000547268 RIMS2Q9UQ26 1411 aa30.73■■■□□ 2.51
PRDM4-203ENST00000547268 CHGAP10645 457 aaKnown RBP30.73■■■□□ 2.51
PRDM4-203ENST00000547268 MPHOSPH9Q99550 1183 aa30.73■■■□□ 2.51
PRDM4-203ENST00000547268 IQSEC2Q5JU85 1478 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms