RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 PRDM15P57071 1507 aaPredicted RBP24.52■■□□□ 1.52
LETMD1-205ENST00000546992 KIF3BO15066 747 aa24.49■■□□□ 1.51
LETMD1-205ENST00000546992 VWDEQ8N2E2 1590 aa24.49■■□□□ 1.51
LETMD1-205ENST00000546992 CEP152O94986 1710 aa24.49■■□□□ 1.51
LETMD1-205ENST00000546992 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
LETMD1-205ENST00000546992 KDM5DQ9BY66 1539 aa24.46■■□□□ 1.51
LETMD1-205ENST00000546992 ADAMTSL3P82987 1691 aa24.45■■□□□ 1.5
LETMD1-205ENST00000546992 FER1L4A9Z1Z3 1794 aa24.44■■□□□ 1.5
LETMD1-205ENST00000546992 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
LETMD1-205ENST00000546992 ARID4BQ4LE39 1312 aaPredicted RBP24.42■■□□□ 1.5
LETMD1-205ENST00000546992 ZC3H13Q5T200 1668 aaKnown RBP24.42■■□□□ 1.5
LETMD1-205ENST00000546992 MADDQ8WXG6 1647 aa24.41■■□□□ 1.5
LETMD1-205ENST00000546992 ABCC3O15438 1527 aa24.4■■□□□ 1.5
LETMD1-205ENST00000546992 PZPP20742 1482 aa24.4■■□□□ 1.5
LETMD1-205ENST00000546992 MLECQ14165 292 aa24.4■■□□□ 1.5
LETMD1-205ENST00000546992 GGT6Q6P531 493 aa24.4■■□□□ 1.5
LETMD1-205ENST00000546992 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.49
LETMD1-205ENST00000546992 CAMSAP1Q5T5Y3 1602 aa24.38■■□□□ 1.49
LETMD1-205ENST00000546992 TET3O43151 1660 aa24.37■■□□□ 1.49
LETMD1-205ENST00000546992 LMTK2Q8IWU2 1503 aa24.36■■□□□ 1.49
LETMD1-205ENST00000546992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.36■■□□□ 1.49
LETMD1-205ENST00000546992 RIMS1Q86UR5 1692 aaKnown RBP24.36■■□□□ 1.49
LETMD1-205ENST00000546992 MROH2AA6NES4 1674 aa24.35■■□□□ 1.49
LETMD1-205ENST00000546992 NUP155O75694 1391 aa24.35■■□□□ 1.49
LETMD1-205ENST00000546992 HRCP23327 699 aa24.35■■□□□ 1.49
LETMD1-205ENST00000546992 E9PCH4 1651 aa24.34■■□□□ 1.49
LETMD1-205ENST00000546992 EFCAB6Q5THR3 1501 aa24.32■■□□□ 1.48
LETMD1-205ENST00000546992 TRIM52Q96A61 297 aa24.31■■□□□ 1.48
LETMD1-205ENST00000546992 C3P01024 1663 aa24.3■■□□□ 1.48
LETMD1-205ENST00000546992 KANK1Q14678 1352 aa24.29■■□□□ 1.48
LETMD1-205ENST00000546992 CFAP65Q6ZU64 1925 aaKnown RBP24.28■■□□□ 1.48
LETMD1-205ENST00000546992 PPP6R1Q9UPN7 881 aa24.26■■□□□ 1.47
LETMD1-205ENST00000546992 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
LETMD1-205ENST00000546992 CNTLNQ9NXG0 1405 aa24.25■■□□□ 1.47
LETMD1-205ENST00000546992 NPATQ14207 1427 aa24.24■■□□□ 1.47
LETMD1-205ENST00000546992 PREX1Q8TCU6 1659 aa24.23■■□□□ 1.47
LETMD1-205ENST00000546992 DHX57Q6P158 1386 aaKnown RBP24.22■■□□□ 1.47
LETMD1-205ENST00000546992 MPHOSPH9Q99550 1183 aa24.22■■□□□ 1.47
LETMD1-205ENST00000546992 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
LETMD1-205ENST00000546992 ARHGAP31Q2M1Z3 1444 aa24.21■■□□□ 1.47
LETMD1-205ENST00000546992 KDM4FA0A1W2PPD8 638 aa24.21■■□□□ 1.47
LETMD1-205ENST00000546992 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
LETMD1-205ENST00000546992 SLC4A1APQ9BWU0 796 aaKnown RBP24.2■■□□□ 1.46
LETMD1-205ENST00000546992 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
LETMD1-205ENST00000546992 PKD2Q13563 968 aa24.17■■□□□ 1.46
LETMD1-205ENST00000546992 PTPRMP28827 1452 aa24.17■■□□□ 1.46
LETMD1-205ENST00000546992 RPRD2Q5VT52 1461 aaKnown RBP24.17■■□□□ 1.46
LETMD1-205ENST00000546992 SYNMO15061 1565 aa24.16■■□□□ 1.46
LETMD1-205ENST00000546992 FOXD1Q16676 465 aa24.16■■□□□ 1.46
LETMD1-205ENST00000546992 SPATA31D1Q6ZQQ2 1576 aa24.16■■□□□ 1.46
LETMD1-205ENST00000546992 ERVK-7P63135 1459 aa24.15■■□□□ 1.46
LETMD1-205ENST00000546992 ESF1Q9H501 851 aaKnown RBP24.14■■□□□ 1.45
LETMD1-205ENST00000546992 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
LETMD1-205ENST00000546992 NOS1P29475 1434 aa24.12■■□□□ 1.45
LETMD1-205ENST00000546992 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
LETMD1-205ENST00000546992 FBXO31Q5XUX0 539 aaPredicted RBP24.11■■□□□ 1.45
LETMD1-205ENST00000546992 PTPRTO14522 1441 aa24.1■■□□□ 1.45
LETMD1-205ENST00000546992 TRPM2O94759 1503 aa24.1■■□□□ 1.45
LETMD1-205ENST00000546992 UGGT1Q9NYU2 1555 aa24.1■■□□□ 1.45
LETMD1-205ENST00000546992 PIK3C2BO00750 1634 aa24.1■■□□□ 1.45
LETMD1-205ENST00000546992 CLTCL1P53675 1640 aa24.09■■□□□ 1.45
LETMD1-205ENST00000546992 MYO3AQ8NEV4 1616 aa24.06■■□□□ 1.44
LETMD1-205ENST00000546992 ANKRD30BQ9BXX2 1392 aa24.05■■□□□ 1.44
LETMD1-205ENST00000546992 PLPPR3Q6T4P5 718 aa24.04■■□□□ 1.44
LETMD1-205ENST00000546992 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
LETMD1-205ENST00000546992 TNRQ92752 1358 aa24.01■■□□□ 1.43
LETMD1-205ENST00000546992 SETD1BQ9UPS6 1966 aaKnown RBP24■■□□□ 1.43
LETMD1-205ENST00000546992 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
LETMD1-205ENST00000546992 KIF1BO60333 1816 aa23.98■■□□□ 1.43
LETMD1-205ENST00000546992 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
LETMD1-205ENST00000546992 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
LETMD1-205ENST00000546992 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
LETMD1-205ENST00000546992 CEP170BQ9Y4F5 1589 aaPredicted RBP23.93■■□□□ 1.42
LETMD1-205ENST00000546992 ADGRB3O60242 1522 aa23.93■■□□□ 1.42
LETMD1-205ENST00000546992 NLRP1Q9C000 1473 aa23.93■■□□□ 1.42
LETMD1-205ENST00000546992 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
LETMD1-205ENST00000546992 CCER1Q8TC90 406 aaPredicted RBP23.92■■□□□ 1.42
LETMD1-205ENST00000546992 IDI1Q13907 227 aa23.9■■□□□ 1.42
LETMD1-205ENST00000546992 SIN3AQ96ST3 1273 aa23.9■■□□□ 1.42
LETMD1-205ENST00000546992 A2ML1A8K2U0 1454 aa23.88■■□□□ 1.41
LETMD1-205ENST00000546992 SPATA31E1Q6ZUB1 1445 aa23.88■■□□□ 1.41
LETMD1-205ENST00000546992 SLC52A1Q9NWF4 448 aa23.87■■□□□ 1.41
LETMD1-205ENST00000546992 IFT172Q9UG01 1749 aa23.87■■□□□ 1.41
LETMD1-205ENST00000546992 NEURL4Q96JN8 1562 aa23.86■■□□□ 1.41
LETMD1-205ENST00000546992 CLSPNQ9HAW4 1339 aa23.85■■□□□ 1.41
LETMD1-205ENST00000546992 UHRF1BP1Q6BDS2 1440 aa23.84■■□□□ 1.41
LETMD1-205ENST00000546992 LMTK3Q96Q04 1460 aa23.83■■□□□ 1.41
LETMD1-205ENST00000546992 PPLO60437 1756 aa23.83■■□□□ 1.4
LETMD1-205ENST00000546992 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
LETMD1-205ENST00000546992 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
LETMD1-205ENST00000546992 CHGAP10645 457 aaKnown RBP23.76■■□□□ 1.39
LETMD1-205ENST00000546992 ARHGAP23Q9P227 1491 aa23.75■■□□□ 1.39
LETMD1-205ENST00000546992 SLIT1O75093 1534 aa23.75■■□□□ 1.39
LETMD1-205ENST00000546992 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
LETMD1-205ENST00000546992 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
LETMD1-205ENST00000546992 RGL3Q3MIN7 710 aa23.72■■□□□ 1.39
LETMD1-205ENST00000546992 TMEM2Q9UHN6 1383 aa23.71■■□□□ 1.39
LETMD1-205ENST00000546992 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
LETMD1-205ENST00000546992 STAG3Q9UJ98 1225 aa23.7■■□□□ 1.38
LETMD1-205ENST00000546992 STRCQ7RTU9 1775 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms