RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 PRDM15P57071 1507 aaPredicted RBP24.52■■□□□ 1.52
LETMD1-205ENST00000546992 KIF3BO15066 747 aa24.49■■□□□ 1.51
LETMD1-205ENST00000546992 VWDEQ8N2E2 1590 aa24.49■■□□□ 1.51
LETMD1-205ENST00000546992 CEP152O94986 1710 aa24.49■■□□□ 1.51
LETMD1-205ENST00000546992 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
LETMD1-205ENST00000546992 KDM5DQ9BY66 1539 aa24.46■■□□□ 1.51
LETMD1-205ENST00000546992 ADAMTSL3P82987 1691 aa24.45■■□□□ 1.5
LETMD1-205ENST00000546992 FER1L4A9Z1Z3 1794 aa24.44■■□□□ 1.5
LETMD1-205ENST00000546992 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
LETMD1-205ENST00000546992 ARID4BQ4LE39 1312 aaPredicted RBP24.42■■□□□ 1.5
LETMD1-205ENST00000546992 ZC3H13Q5T200 1668 aaKnown RBP24.42■■□□□ 1.5
LETMD1-205ENST00000546992 MADDQ8WXG6 1647 aa24.41■■□□□ 1.5
LETMD1-205ENST00000546992 ABCC3O15438 1527 aa24.4■■□□□ 1.5
LETMD1-205ENST00000546992 PZPP20742 1482 aa24.4■■□□□ 1.5
LETMD1-205ENST00000546992 MLECQ14165 292 aa24.4■■□□□ 1.5
LETMD1-205ENST00000546992 GGT6Q6P531 493 aa24.4■■□□□ 1.5
LETMD1-205ENST00000546992 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.49
LETMD1-205ENST00000546992 CAMSAP1Q5T5Y3 1602 aa24.38■■□□□ 1.49
LETMD1-205ENST00000546992 TET3O43151 1660 aa24.37■■□□□ 1.49
LETMD1-205ENST00000546992 LMTK2Q8IWU2 1503 aa24.36■■□□□ 1.49
LETMD1-205ENST00000546992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.36■■□□□ 1.49
LETMD1-205ENST00000546992 RIMS1Q86UR5 1692 aaKnown RBP24.36■■□□□ 1.49
LETMD1-205ENST00000546992 MROH2AA6NES4 1674 aa24.35■■□□□ 1.49
LETMD1-205ENST00000546992 NUP155O75694 1391 aa24.35■■□□□ 1.49
LETMD1-205ENST00000546992 HRCP23327 699 aa24.35■■□□□ 1.49
LETMD1-205ENST00000546992 E9PCH4 1651 aa24.34■■□□□ 1.49
LETMD1-205ENST00000546992 EFCAB6Q5THR3 1501 aa24.32■■□□□ 1.48
LETMD1-205ENST00000546992 TRIM52Q96A61 297 aa24.31■■□□□ 1.48
LETMD1-205ENST00000546992 C3P01024 1663 aa24.3■■□□□ 1.48
LETMD1-205ENST00000546992 KANK1Q14678 1352 aa24.29■■□□□ 1.48
LETMD1-205ENST00000546992 CFAP65Q6ZU64 1925 aaKnown RBP24.28■■□□□ 1.48
LETMD1-205ENST00000546992 PPP6R1Q9UPN7 881 aa24.26■■□□□ 1.47
LETMD1-205ENST00000546992 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
LETMD1-205ENST00000546992 CNTLNQ9NXG0 1405 aa24.25■■□□□ 1.47
LETMD1-205ENST00000546992 NPATQ14207 1427 aa24.24■■□□□ 1.47
LETMD1-205ENST00000546992 PREX1Q8TCU6 1659 aa24.23■■□□□ 1.47
LETMD1-205ENST00000546992 DHX57Q6P158 1386 aaKnown RBP24.22■■□□□ 1.47
LETMD1-205ENST00000546992 MPHOSPH9Q99550 1183 aa24.22■■□□□ 1.47
LETMD1-205ENST00000546992 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
LETMD1-205ENST00000546992 ARHGAP31Q2M1Z3 1444 aa24.21■■□□□ 1.47
LETMD1-205ENST00000546992 KDM4FA0A1W2PPD8 638 aa24.21■■□□□ 1.47
LETMD1-205ENST00000546992 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
LETMD1-205ENST00000546992 SLC4A1APQ9BWU0 796 aaKnown RBP24.2■■□□□ 1.46
LETMD1-205ENST00000546992 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
LETMD1-205ENST00000546992 PKD2Q13563 968 aa24.17■■□□□ 1.46
LETMD1-205ENST00000546992 PTPRMP28827 1452 aa24.17■■□□□ 1.46
LETMD1-205ENST00000546992 RPRD2Q5VT52 1461 aaKnown RBP24.17■■□□□ 1.46
LETMD1-205ENST00000546992 SYNMO15061 1565 aa24.16■■□□□ 1.46
LETMD1-205ENST00000546992 FOXD1Q16676 465 aa24.16■■□□□ 1.46
LETMD1-205ENST00000546992 SPATA31D1Q6ZQQ2 1576 aa24.16■■□□□ 1.46
LETMD1-205ENST00000546992 ERVK-7P63135 1459 aa24.15■■□□□ 1.46
LETMD1-205ENST00000546992 ESF1Q9H501 851 aaKnown RBP24.14■■□□□ 1.45
LETMD1-205ENST00000546992 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
LETMD1-205ENST00000546992 NOS1P29475 1434 aa24.12■■□□□ 1.45
LETMD1-205ENST00000546992 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
LETMD1-205ENST00000546992 FBXO31Q5XUX0 539 aaPredicted RBP24.11■■□□□ 1.45
LETMD1-205ENST00000546992 PTPRTO14522 1441 aa24.1■■□□□ 1.45
LETMD1-205ENST00000546992 TRPM2O94759 1503 aa24.1■■□□□ 1.45
LETMD1-205ENST00000546992 UGGT1Q9NYU2 1555 aa24.1■■□□□ 1.45
LETMD1-205ENST00000546992 PIK3C2BO00750 1634 aa24.1■■□□□ 1.45
LETMD1-205ENST00000546992 CLTCL1P53675 1640 aa24.09■■□□□ 1.45
LETMD1-205ENST00000546992 MYO3AQ8NEV4 1616 aa24.06■■□□□ 1.44
LETMD1-205ENST00000546992 ANKRD30BQ9BXX2 1392 aa24.05■■□□□ 1.44
LETMD1-205ENST00000546992 PLPPR3Q6T4P5 718 aa24.04■■□□□ 1.44
LETMD1-205ENST00000546992 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
LETMD1-205ENST00000546992 TNRQ92752 1358 aa24.01■■□□□ 1.43
LETMD1-205ENST00000546992 SETD1BQ9UPS6 1966 aaKnown RBP24■■□□□ 1.43
LETMD1-205ENST00000546992 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
LETMD1-205ENST00000546992 KIF1BO60333 1816 aa23.98■■□□□ 1.43
LETMD1-205ENST00000546992 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
LETMD1-205ENST00000546992 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
LETMD1-205ENST00000546992 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
LETMD1-205ENST00000546992 CEP170BQ9Y4F5 1589 aaPredicted RBP23.93■■□□□ 1.42
LETMD1-205ENST00000546992 ADGRB3O60242 1522 aa23.93■■□□□ 1.42
LETMD1-205ENST00000546992 NLRP1Q9C000 1473 aa23.93■■□□□ 1.42
LETMD1-205ENST00000546992 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
LETMD1-205ENST00000546992 CCER1Q8TC90 406 aaPredicted RBP23.92■■□□□ 1.42
LETMD1-205ENST00000546992 IDI1Q13907 227 aa23.9■■□□□ 1.42
LETMD1-205ENST00000546992 SIN3AQ96ST3 1273 aa23.9■■□□□ 1.42
LETMD1-205ENST00000546992 A2ML1A8K2U0 1454 aa23.88■■□□□ 1.41
LETMD1-205ENST00000546992 SPATA31E1Q6ZUB1 1445 aa23.88■■□□□ 1.41
LETMD1-205ENST00000546992 SLC52A1Q9NWF4 448 aa23.87■■□□□ 1.41
LETMD1-205ENST00000546992 IFT172Q9UG01 1749 aa23.87■■□□□ 1.41
LETMD1-205ENST00000546992 NEURL4Q96JN8 1562 aa23.86■■□□□ 1.41
LETMD1-205ENST00000546992 CLSPNQ9HAW4 1339 aa23.85■■□□□ 1.41
LETMD1-205ENST00000546992 UHRF1BP1Q6BDS2 1440 aa23.84■■□□□ 1.41
LETMD1-205ENST00000546992 LMTK3Q96Q04 1460 aa23.83■■□□□ 1.41
LETMD1-205ENST00000546992 PPLO60437 1756 aa23.83■■□□□ 1.4
LETMD1-205ENST00000546992 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
LETMD1-205ENST00000546992 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
LETMD1-205ENST00000546992 CHGAP10645 457 aaKnown RBP23.76■■□□□ 1.39
LETMD1-205ENST00000546992 ARHGAP23Q9P227 1491 aa23.75■■□□□ 1.39
LETMD1-205ENST00000546992 SLIT1O75093 1534 aa23.75■■□□□ 1.39
LETMD1-205ENST00000546992 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
LETMD1-205ENST00000546992 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
LETMD1-205ENST00000546992 RGL3Q3MIN7 710 aa23.72■■□□□ 1.39
LETMD1-205ENST00000546992 TMEM2Q9UHN6 1383 aa23.71■■□□□ 1.39
LETMD1-205ENST00000546992 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
LETMD1-205ENST00000546992 STAG3Q9UJ98 1225 aa23.7■■□□□ 1.38
LETMD1-205ENST00000546992 STRCQ7RTU9 1775 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms