RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 KIF3BO15066 747 aa24.6■■□□□ 1.53
DDX54-204ENST00000546898 NPATQ14207 1427 aa24.6■■□□□ 1.53
DDX54-204ENST00000546898 UHRF1BP1Q6BDS2 1440 aa24.6■■□□□ 1.53
DDX54-204ENST00000546898 ZC3H13Q5T200 1668 aaKnown RBP24.59■■□□□ 1.53
DDX54-204ENST00000546898 KIF15Q9NS87 1388 aa24.56■■□□□ 1.52
DDX54-204ENST00000546898 ERBINQ96RT1 1412 aa24.55■■□□□ 1.52
DDX54-204ENST00000546898 MROH1Q8NDA8 1641 aa24.53■■□□□ 1.52
DDX54-204ENST00000546898 ADGRL2O95490 1459 aa24.53■■□□□ 1.52
DDX54-204ENST00000546898 ANKRD30AQ9BXX3 1397 aa24.52■■□□□ 1.52
DDX54-204ENST00000546898 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
DDX54-204ENST00000546898 MYO3AQ8NEV4 1616 aa24.51■■□□□ 1.51
DDX54-204ENST00000546898 ZNF142P52746 1687 aaPredicted RBP24.51■■□□□ 1.51
DDX54-204ENST00000546898 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
DDX54-204ENST00000546898 HSPA2P54652 639 aa24.5■■□□□ 1.51
DDX54-204ENST00000546898 PRDM15P57071 1507 aaPredicted RBP24.5■■□□□ 1.51
DDX54-204ENST00000546898 DEPDC5O75140 1603 aa24.5■■□□□ 1.51
DDX54-204ENST00000546898 ABCC3O15438 1527 aa24.48■■□□□ 1.51
DDX54-204ENST00000546898 CEP152O94986 1710 aa24.48■■□□□ 1.51
DDX54-204ENST00000546898 PZPP20742 1482 aa24.48■■□□□ 1.51
DDX54-204ENST00000546898 NCOA1Q15788 1441 aa24.48■■□□□ 1.51
DDX54-204ENST00000546898 WASHC2CQ9Y4E1 1318 aa24.48■■□□□ 1.51
DDX54-204ENST00000546898 RRP7BPQ9NSQ0 103 aa24.46■■□□□ 1.51
DDX54-204ENST00000546898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.44■■□□□ 1.5
DDX54-204ENST00000546898 CAMSAP1Q5T5Y3 1602 aa24.44■■□□□ 1.5
DDX54-204ENST00000546898 CHIC2Q9UKJ5 165 aa24.44■■□□□ 1.5
DDX54-204ENST00000546898 CEP170BQ9Y4F5 1589 aaPredicted RBP24.43■■□□□ 1.5
DDX54-204ENST00000546898 STRCQ7RTU9 1775 aa24.43■■□□□ 1.5
DDX54-204ENST00000546898 PPARGC1BQ86YN6 1023 aaKnown RBP24.41■■□□□ 1.5
DDX54-204ENST00000546898 TNRQ92752 1358 aa24.37■■□□□ 1.49
DDX54-204ENST00000546898 SPATA31D1Q6ZQQ2 1576 aa24.37■■□□□ 1.49
DDX54-204ENST00000546898 VWDEQ8N2E2 1590 aa24.37■■□□□ 1.49
DDX54-204ENST00000546898 RRBP1Q9P2E9 1410 aaKnown RBP24.36■■□□□ 1.49
DDX54-204ENST00000546898 ROCK1Q13464 1354 aa24.36■■□□□ 1.49
DDX54-204ENST00000546898 A2ML1A8K2U0 1454 aa24.36■■□□□ 1.49
DDX54-204ENST00000546898 KANK1Q14678 1352 aa24.35■■□□□ 1.49
DDX54-204ENST00000546898 ANKRD50Q9ULJ7 1429 aa24.35■■□□□ 1.49
DDX54-204ENST00000546898 LMTK2Q8IWU2 1503 aa24.34■■□□□ 1.49
DDX54-204ENST00000546898 ARHGAP31Q2M1Z3 1444 aa24.33■■□□□ 1.49
DDX54-204ENST00000546898 ERVK-7P63135 1459 aa24.32■■□□□ 1.48
DDX54-204ENST00000546898 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
DDX54-204ENST00000546898 NLRP1Q9C000 1473 aa24.32■■□□□ 1.48
DDX54-204ENST00000546898 FBXO31Q5XUX0 539 aaPredicted RBP24.32■■□□□ 1.48
DDX54-204ENST00000546898 CFAP65Q6ZU64 1925 aaKnown RBP24.31■■□□□ 1.48
DDX54-204ENST00000546898 UNC13BO14795 1591 aa24.3■■□□□ 1.48
DDX54-204ENST00000546898 DMRT2Q9Y5R5 561 aa24.3■■□□□ 1.48
DDX54-204ENST00000546898 PTPRTO14522 1441 aa24.28■■□□□ 1.48
DDX54-204ENST00000546898 EFCAB6Q5THR3 1501 aa24.27■■□□□ 1.48
DDX54-204ENST00000546898 FBXO41Q8TF61 875 aa24.27■■□□□ 1.48
DDX54-204ENST00000546898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.489e-6■■■□□ 18.9
DDX54-204ENST00000546898 POLR1AO95602 1720 aaPredicted RBP24.26■■□□□ 1.47
DDX54-204ENST00000546898 UGGT1Q9NYU2 1555 aa24.24■■□□□ 1.47
DDX54-204ENST00000546898 TET3O43151 1660 aa24.24■■□□□ 1.47
DDX54-204ENST00000546898 GCC2Q8IWJ2 1684 aa24.23■■□□□ 1.47
DDX54-204ENST00000546898 ITGAEP38570 1179 aa24.22■■□□□ 1.47
DDX54-204ENST00000546898 PKD2Q13563 968 aa24.2■■□□□ 1.46
DDX54-204ENST00000546898 IQGAP3Q86VI3 1631 aa24.2■■□□□ 1.46
DDX54-204ENST00000546898 UBR1Q8IWV7 1749 aa24.19■■□□□ 1.46
DDX54-204ENST00000546898 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
DDX54-204ENST00000546898 KDM5AP29375 1690 aaKnown RBP24.16■■□□□ 1.46
DDX54-204ENST00000546898 THEMISQ8N1K5 641 aaPredicted RBP24.15■■□□□ 1.46
DDX54-204ENST00000546898 NCKAP5LQ9HCH0 1330 aa24.14■■□□□ 1.46
DDX54-204ENST00000546898 SYNMO15061 1565 aa24.14■■□□□ 1.45
DDX54-204ENST00000546898 NEURL4Q96JN8 1562 aa24.14■■□□□ 1.45
DDX54-204ENST00000546898 PIK3C2BO00750 1634 aa24.13■■□□□ 1.45
DDX54-204ENST00000546898 NOS1P29475 1434 aa24.13■■□□□ 1.45
DDX54-204ENST00000546898 E9PCH4 1651 aa24.11■■□□□ 1.45
DDX54-204ENST00000546898 NAIPQ13075 1403 aa24.09■■□□□ 1.45
DDX54-204ENST00000546898 MED14O60244 1454 aa24.07■■□□□ 1.44
DDX54-204ENST00000546898 HFM1A2PYH4 1435 aa24.07■■□□□ 1.44
DDX54-204ENST00000546898 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
DDX54-204ENST00000546898 NUP155O75694 1391 aa24.06■■□□□ 1.44
DDX54-204ENST00000546898 SLIT1O75093 1534 aa24.06■■□□□ 1.44
DDX54-204ENST00000546898 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
DDX54-204ENST00000546898 IQGAP1P46940 1657 aa24.05■■□□□ 1.44
DDX54-204ENST00000546898 ARHGAP23Q9P227 1491 aa24.05■■□□□ 1.44
DDX54-204ENST00000546898 ADGRB3O60242 1522 aa24.05■■□□□ 1.44
DDX54-204ENST00000546898 CERKQ8TCT0 537 aa24.04■■□□□ 1.44
DDX54-204ENST00000546898 NPHP4O75161 1426 aaPredicted RBP24.01■■□□□ 1.43
DDX54-204ENST00000546898 SLC52A1Q9NWF4 448 aa24.01■■□□□ 1.43
DDX54-204ENST00000546898 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
DDX54-204ENST00000546898 IQSEC2Q5JU85 1478 aa24■■□□□ 1.43
DDX54-204ENST00000546898 IDI1Q13907 227 aa23.99■■□□□ 1.43
DDX54-204ENST00000546898 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
DDX54-204ENST00000546898 MYO5BQ9ULV0 1848 aa23.98■■□□□ 1.43
DDX54-204ENST00000546898 STAG3Q9UJ98 1225 aa23.98■■□□□ 1.43
DDX54-204ENST00000546898 TMEM2Q9UHN6 1383 aa23.96■■□□□ 1.43
DDX54-204ENST00000546898 ZNF335Q9H4Z2 1342 aaPredicted RBP23.95■■□□□ 1.42
DDX54-204ENST00000546898 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
DDX54-204ENST00000546898 EID1Q9Y6B2 187 aa23.92■■□□□ 1.42
DDX54-204ENST00000546898 CPS1P31327 1500 aa23.92■■□□□ 1.42
DDX54-204ENST00000546898 TXNDC2Q86VQ3 553 aa23.9■■□□□ 1.42
DDX54-204ENST00000546898 LTKP29376 864 aa23.89■■□□□ 1.41
DDX54-204ENST00000546898 TRPM2O94759 1503 aa23.87■■□□□ 1.41
DDX54-204ENST00000546898 ZFYVE9O95405 1425 aa23.85■■□□□ 1.41
DDX54-204ENST00000546898 STRCP1A6NGW2 1772 aa23.84■■□□□ 1.41
DDX54-204ENST00000546898 TRIM52Q96A61 297 aa23.83■■□□□ 1.41
DDX54-204ENST00000546898 CLTCL1P53675 1640 aa23.82■■□□□ 1.4
DDX54-204ENST00000546898 RIMS2Q9UQ26 1411 aa23.82■■□□□ 1.4
DDX54-204ENST00000546898 KIF1BO60333 1816 aa23.82■■□□□ 1.4
DDX54-204ENST00000546898 ACIN1Q9UKV3 1341 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms