RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 GGT6Q6P531 493 aa23.84■■□□□ 1.41
SSH1-204ENST00000546697 ADGRL2O95490 1459 aa23.83■■□□□ 1.41
SSH1-204ENST00000546697 KIF3BO15066 747 aa23.83■■□□□ 1.41
SSH1-204ENST00000546697 ERBINQ96RT1 1412 aa23.83■■□□□ 1.4
SSH1-204ENST00000546697 MROH1Q8NDA8 1641 aa23.82■■□□□ 1.4
SSH1-204ENST00000546697 ZC3H13Q5T200 1668 aaKnown RBP23.79■■□□□ 1.4
SSH1-204ENST00000546697 KIF15Q9NS87 1388 aa23.79■■□□□ 1.4
SSH1-204ENST00000546697 NCOA1Q15788 1441 aa23.79■■□□□ 1.4
SSH1-204ENST00000546697 ILDR1Q86SU0 546 aaPredicted RBP23.79■■□□□ 1.4
SSH1-204ENST00000546697 PZPP20742 1482 aa23.79■■□□□ 1.4
SSH1-204ENST00000546697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
SSH1-204ENST00000546697 ZNF142P52746 1687 aaPredicted RBP23.77■■□□□ 1.4
SSH1-204ENST00000546697 PRDM15P57071 1507 aaPredicted RBP23.76■■□□□ 1.39
SSH1-204ENST00000546697 HSPA2P54652 639 aa23.76■■□□□ 1.39
SSH1-204ENST00000546697 DEPDC5O75140 1603 aa23.76■■□□□ 1.39
SSH1-204ENST00000546697 ABCC3O15438 1527 aa23.75■■□□□ 1.39
SSH1-204ENST00000546697 PLPPR3Q6T4P5 718 aa23.75■■□□□ 1.39
SSH1-204ENST00000546697 ANKRD30AQ9BXX3 1397 aa23.75■■□□□ 1.39
SSH1-204ENST00000546697 MYO3AQ8NEV4 1616 aa23.73■■□□□ 1.39
SSH1-204ENST00000546697 STRCQ7RTU9 1775 aa23.73■■□□□ 1.39
SSH1-204ENST00000546697 WASHC2CQ9Y4E1 1318 aa23.72■■□□□ 1.39
SSH1-204ENST00000546697 VWDEQ8N2E2 1590 aa23.69■■□□□ 1.38
SSH1-204ENST00000546697 ARHGAP31Q2M1Z3 1444 aa23.69■■□□□ 1.38
SSH1-204ENST00000546697 CEP170BQ9Y4F5 1589 aaPredicted RBP23.69■■□□□ 1.38
SSH1-204ENST00000546697 PLA2R1Q13018 1463 aa23.68■■□□□ 1.38
SSH1-204ENST00000546697 ROCK1Q13464 1354 aa23.67■■□□□ 1.38
SSH1-204ENST00000546697 SPATA31D1Q6ZQQ2 1576 aa23.67■■□□□ 1.38
SSH1-204ENST00000546697 RRP7BPQ9NSQ0 103 aa23.67■■□□□ 1.38
SSH1-204ENST00000546697 LMTK2Q8IWU2 1503 aa23.67■■□□□ 1.38
SSH1-204ENST00000546697 A2ML1A8K2U0 1454 aa23.66■■□□□ 1.38
SSH1-204ENST00000546697 PTPRTO14522 1441 aa23.65■■□□□ 1.38
SSH1-204ENST00000546697 RRBP1Q9P2E9 1410 aaKnown RBP23.64■■□□□ 1.37
SSH1-204ENST00000546697 TNRQ92752 1358 aa23.64■■□□□ 1.37
SSH1-204ENST00000546697 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
SSH1-204ENST00000546697 CAMSAP1Q5T5Y3 1602 aa23.63■■□□□ 1.37
SSH1-204ENST00000546697 FAM50AQ14320 339 aaKnown RBP23.63■■□□□ 1.37
SSH1-204ENST00000546697 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
SSH1-204ENST00000546697 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
SSH1-204ENST00000546697 CEP152O94986 1710 aa23.61■■□□□ 1.37
SSH1-204ENST00000546697 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
SSH1-204ENST00000546697 ERVK-7P63135 1459 aa23.6■■□□□ 1.37
SSH1-204ENST00000546697 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
SSH1-204ENST00000546697 KANK1Q14678 1352 aa23.54■■□□□ 1.36
SSH1-204ENST00000546697 UNC13BO14795 1591 aa23.53■■□□□ 1.36
SSH1-204ENST00000546697 PKD2Q13563 968 aa23.53■■□□□ 1.36
SSH1-204ENST00000546697 EFCAB6Q5THR3 1501 aa23.52■■□□□ 1.36
SSH1-204ENST00000546697 RPRD2Q5VT52 1461 aaKnown RBP23.49■■□□□ 1.35
SSH1-204ENST00000546697 UGGT1Q9NYU2 1555 aa23.49■■□□□ 1.35
SSH1-204ENST00000546697 NOS1P29475 1434 aa23.48■■□□□ 1.35
SSH1-204ENST00000546697 KDM5AP29375 1690 aaKnown RBP23.46■■□□□ 1.35
SSH1-204ENST00000546697 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
SSH1-204ENST00000546697 NEURL4Q96JN8 1562 aa23.45■■□□□ 1.34
SSH1-204ENST00000546697 MED14O60244 1454 aa23.45■■□□□ 1.34
SSH1-204ENST00000546697 THEMISQ8N1K5 641 aaPredicted RBP23.45■■□□□ 1.34
SSH1-204ENST00000546697 TET3O43151 1660 aa23.44■■□□□ 1.34
SSH1-204ENST00000546697 LTBP4Q8N2S1 1624 aa23.44■■□□□ 1.34
SSH1-204ENST00000546697 POLR1AO95602 1720 aaPredicted RBP23.43■■□□□ 1.34
SSH1-204ENST00000546697 UBR1Q8IWV7 1749 aa23.43■■□□□ 1.34
SSH1-204ENST00000546697 IQGAP3Q86VI3 1631 aa23.43■■□□□ 1.34
SSH1-204ENST00000546697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.34
SSH1-204ENST00000546697 NCKAP5LQ9HCH0 1330 aa23.41■■□□□ 1.34
SSH1-204ENST00000546697 ARHGAP23Q9P227 1491 aa23.41■■□□□ 1.34
SSH1-204ENST00000546697 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
SSH1-204ENST00000546697 SYNMO15061 1565 aa23.4■■□□□ 1.34
SSH1-204ENST00000546697 SLIT1O75093 1534 aa23.4■■□□□ 1.34
SSH1-204ENST00000546697 FBXO41Q8TF61 875 aa23.39■■□□□ 1.33
SSH1-204ENST00000546697 IQSEC2Q5JU85 1478 aa23.38■■□□□ 1.33
SSH1-204ENST00000546697 CERKQ8TCT0 537 aa23.38■■□□□ 1.33
SSH1-204ENST00000546697 NAIPQ13075 1403 aa23.37■■□□□ 1.33
SSH1-204ENST00000546697 CFAP65Q6ZU64 1925 aaKnown RBP23.36■■□□□ 1.33
SSH1-204ENST00000546697 HFM1A2PYH4 1435 aa23.35■■□□□ 1.33
SSH1-204ENST00000546697 PIK3C2BO00750 1634 aa23.35■■□□□ 1.33
SSH1-204ENST00000546697 ANKLE2Q86XL3 938 aa23.35■■□□□ 1.33
SSH1-204ENST00000546697 SLC52A1Q9NWF4 448 aa23.34■■□□□ 1.33
SSH1-204ENST00000546697 E9PCH4 1651 aa23.32■■□□□ 1.32
SSH1-204ENST00000546697 IDI1Q13907 227 aa23.31■■□□□ 1.32
SSH1-204ENST00000546697 ITGAEP38570 1179 aa23.3■■□□□ 1.32
SSH1-204ENST00000546697 NPHP4O75161 1426 aaPredicted RBP23.3■■□□□ 1.32
SSH1-204ENST00000546697 ADGRB3O60242 1522 aa23.29■■□□□ 1.32
SSH1-204ENST00000546697 SCAF11Q99590 1463 aaKnown RBP23.29■■□□□ 1.32
SSH1-204ENST00000546697 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
SSH1-204ENST00000546697 NUP155O75694 1391 aa23.28■■□□□ 1.32
SSH1-204ENST00000546697 TMEM2Q9UHN6 1383 aa23.28■■□□□ 1.32
SSH1-204ENST00000546697 ZNF335Q9H4Z2 1342 aaPredicted RBP23.25■■□□□ 1.31
SSH1-204ENST00000546697 CPS1P31327 1500 aa23.23■■□□□ 1.31
SSH1-204ENST00000546697 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
SSH1-204ENST00000546697 LTKP29376 864 aa23.22■■□□□ 1.31
SSH1-204ENST00000546697 ZFYVE9O95405 1425 aa23.2■■□□□ 1.3
SSH1-204ENST00000546697 TXNDC2Q86VQ3 553 aa23.17■■□□□ 1.3
SSH1-204ENST00000546697 EID1Q9Y6B2 187 aa23.16■■□□□ 1.3
SSH1-204ENST00000546697 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
SSH1-204ENST00000546697 TRPM2O94759 1503 aa23.13■■□□□ 1.29
SSH1-204ENST00000546697 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
SSH1-204ENST00000546697 MYO5BQ9ULV0 1848 aa23.12■■□□□ 1.29
SSH1-204ENST00000546697 STRCP1A6NGW2 1772 aa23.12■■□□□ 1.29
SSH1-204ENST00000546697 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
SSH1-204ENST00000546697 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
SSH1-204ENST00000546697 RIMS2Q9UQ26 1411 aa23.08■■□□□ 1.28
SSH1-204ENST00000546697 HDGFP51858 240 aaKnown RBP23.06■■□□□ 1.28
SSH1-204ENST00000546697 LRRC7Q96NW7 1537 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms