RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 KDM5DQ9BY66 1539 aa20.1■□□□□ 0.81
LINC00661-201ENST00000546512 DUOX2Q9NRD8 1548 aa20.1■□□□□ 0.81
LINC00661-201ENST00000546512 FAM135AQ9P2D6 1515 aa20.09■□□□□ 0.81
LINC00661-201ENST00000546512 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
LINC00661-201ENST00000546512 RRP7BPQ9NSQ0 103 aa20.09■□□□□ 0.81
LINC00661-201ENST00000546512 EIF2AK4Q9P2K8 1649 aaKnown RBP20.09■□□□□ 0.81
LINC00661-201ENST00000546512 CHIC2Q9UKJ5 165 aa20.08■□□□□ 0.81
LINC00661-201ENST00000546512 WASHC2CQ9Y4E1 1318 aa20.07■□□□□ 0.8
LINC00661-201ENST00000546512 RNF17Q9BXT8 1623 aaKnown RBP20.07■□□□□ 0.8
LINC00661-201ENST00000546512 PTPRKQ15262 1439 aa20.07■□□□□ 0.8
LINC00661-201ENST00000546512 ANKRD30AQ9BXX3 1397 aa20.06■□□□□ 0.8
LINC00661-201ENST00000546512 ERBINQ96RT1 1412 aa20.04■□□□□ 0.8
LINC00661-201ENST00000546512 MROH1Q8NDA8 1641 aa20.02■□□□□ 0.79
LINC00661-201ENST00000546512 NCOA1Q15788 1441 aa20.02■□□□□ 0.79
LINC00661-201ENST00000546512 ADGRL2O95490 1459 aa20.01■□□□□ 0.79
LINC00661-201ENST00000546512 PZPP20742 1482 aa20.01■□□□□ 0.79
LINC00661-201ENST00000546512 MYO3AQ8NEV4 1616 aa20.01■□□□□ 0.79
LINC00661-201ENST00000546512 ABCC3O15438 1527 aa20.01■□□□□ 0.79
LINC00661-201ENST00000546512 ZC3H13Q5T200 1668 aaKnown RBP20■□□□□ 0.79
LINC00661-201ENST00000546512 FBXO31Q5XUX0 539 aaPredicted RBP19.99■□□□□ 0.79
LINC00661-201ENST00000546512 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
LINC00661-201ENST00000546512 PRDM15P57071 1507 aaPredicted RBP19.97■□□□□ 0.79
LINC00661-201ENST00000546512 TNRQ92752 1358 aa19.96■□□□□ 0.79
LINC00661-201ENST00000546512 CEP170BQ9Y4F5 1589 aaPredicted RBP19.96■□□□□ 0.79
LINC00661-201ENST00000546512 STRCQ7RTU9 1775 aa19.95■□□□□ 0.78
LINC00661-201ENST00000546512 CEP152O94986 1710 aa19.95■□□□□ 0.78
LINC00661-201ENST00000546512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.94■□□□□ 0.78
LINC00661-201ENST00000546512 DEPDC5O75140 1603 aa19.94■□□□□ 0.78
LINC00661-201ENST00000546512 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
LINC00661-201ENST00000546512 CAMSAP1Q5T5Y3 1602 aa19.93■□□□□ 0.78
LINC00661-201ENST00000546512 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.93■□□□□ 0.78
LINC00661-201ENST00000546512 A2ML1A8K2U0 1454 aa19.92■□□□□ 0.78
LINC00661-201ENST00000546512 KANK1Q14678 1352 aa19.92■□□□□ 0.78
LINC00661-201ENST00000546512 ITGAEP38570 1179 aa19.91■□□□□ 0.78
LINC00661-201ENST00000546512 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
LINC00661-201ENST00000546512 ERVK-7P63135 1459 aa19.89■□□□□ 0.77
LINC00661-201ENST00000546512 SPATA31D1Q6ZQQ2 1576 aa19.88■□□□□ 0.77
LINC00661-201ENST00000546512 PLA2R1Q13018 1463 aa19.88■□□□□ 0.77
LINC00661-201ENST00000546512 ROCK1Q13464 1354 aa19.88■□□□□ 0.77
LINC00661-201ENST00000546512 NLRP1Q9C000 1473 aa19.87■□□□□ 0.77
LINC00661-201ENST00000546512 PTPRTO14522 1441 aa19.87■□□□□ 0.77
LINC00661-201ENST00000546512 ARHGAP31Q2M1Z3 1444 aa19.87■□□□□ 0.77
LINC00661-201ENST00000546512 RRBP1Q9P2E9 1410 aaKnown RBP19.86■□□□□ 0.77
LINC00661-201ENST00000546512 VWDEQ8N2E2 1590 aa19.86■□□□□ 0.77
LINC00661-201ENST00000546512 NCKAP5LQ9HCH0 1330 aa19.85■□□□□ 0.77
LINC00661-201ENST00000546512 LMTK2Q8IWU2 1503 aa19.85■□□□□ 0.77
LINC00661-201ENST00000546512 PKD2Q13563 968 aa19.83■□□□□ 0.77
LINC00661-201ENST00000546512 UGGT1Q9NYU2 1555 aa19.83■□□□□ 0.76
LINC00661-201ENST00000546512 ILDR1Q86SU0 546 aaPredicted RBP19.82■□□□□ 0.76
LINC00661-201ENST00000546512 CFAP65Q6ZU64 1925 aaKnown RBP19.82■□□□□ 0.76
LINC00661-201ENST00000546512 THEMISQ8N1K5 641 aaPredicted RBP19.8■□□□□ 0.76
LINC00661-201ENST00000546512 EFCAB6Q5THR3 1501 aa19.8■□□□□ 0.76
LINC00661-201ENST00000546512 UNC13BO14795 1591 aa19.78■□□□□ 0.76
LINC00661-201ENST00000546512 CERKQ8TCT0 537 aa19.76■□□□□ 0.75
LINC00661-201ENST00000546512 POLR1AO95602 1720 aaPredicted RBP19.75■□□□□ 0.75
LINC00661-201ENST00000546512 ANKLE2Q86XL3 938 aa19.74■□□□□ 0.75
LINC00661-201ENST00000546512 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
LINC00661-201ENST00000546512 TET3O43151 1660 aa19.74■□□□□ 0.75
LINC00661-201ENST00000546512 NEURL4Q96JN8 1562 aa19.73■□□□□ 0.75
LINC00661-201ENST00000546512 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
LINC00661-201ENST00000546512 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
LINC00661-201ENST00000546512 NOS1P29475 1434 aa19.72■□□□□ 0.75
LINC00661-201ENST00000546512 SYNMO15061 1565 aa19.71■□□□□ 0.75
LINC00661-201ENST00000546512 GCC2Q8IWJ2 1684 aa19.71■□□□□ 0.75
LINC00661-201ENST00000546512 NUP155O75694 1391 aa19.7■□□□□ 0.74
LINC00661-201ENST00000546512 PIK3C2BO00750 1634 aa19.7■□□□□ 0.74
LINC00661-201ENST00000546512 IQGAP3Q86VI3 1631 aa19.7■□□□□ 0.74
LINC00661-201ENST00000546512 LTBP4Q8N2S1 1624 aa19.69■□□□□ 0.74
LINC00661-201ENST00000546512 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
LINC00661-201ENST00000546512 ZNF335Q9H4Z2 1342 aaPredicted RBP19.69■□□□□ 0.74
LINC00661-201ENST00000546512 NAIPQ13075 1403 aa19.68■□□□□ 0.74
LINC00661-201ENST00000546512 IDI1Q13907 227 aa19.68■□□□□ 0.74
LINC00661-201ENST00000546512 NPHP4O75161 1426 aaPredicted RBP19.68■□□□□ 0.74
LINC00661-201ENST00000546512 MED14O60244 1454 aa19.67■□□□□ 0.74
LINC00661-201ENST00000546512 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
LINC00661-201ENST00000546512 SLIT1O75093 1534 aa19.66■□□□□ 0.74
LINC00661-201ENST00000546512 E9PCH4 1651 aa19.65■□□□□ 0.74
LINC00661-201ENST00000546512 HFM1A2PYH4 1435 aa19.65■□□□□ 0.74
LINC00661-201ENST00000546512 ARHGAP23Q9P227 1491 aa19.65■□□□□ 0.74
LINC00661-201ENST00000546512 SCAF11Q99590 1463 aaKnown RBP19.64■□□□□ 0.73
LINC00661-201ENST00000546512 KDM5AP29375 1690 aaKnown RBP19.64■□□□□ 0.73
LINC00661-201ENST00000546512 IQGAP1P46940 1657 aa19.63■□□□□ 0.73
LINC00661-201ENST00000546512 ADGRB3O60242 1522 aa19.62■□□□□ 0.73
LINC00661-201ENST00000546512 TMEM2Q9UHN6 1383 aa19.62■□□□□ 0.73
LINC00661-201ENST00000546512 TXNDC2Q86VQ3 553 aa19.62■□□□□ 0.73
LINC00661-201ENST00000546512 EID1Q9Y6B2 187 aa19.62■□□□□ 0.73
LINC00661-201ENST00000546512 LTKP29376 864 aa19.61■□□□□ 0.73
LINC00661-201ENST00000546512 IQSEC2Q5JU85 1478 aa19.59■□□□□ 0.73
LINC00661-201ENST00000546512 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
LINC00661-201ENST00000546512 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
LINC00661-201ENST00000546512 CPS1P31327 1500 aa19.55■□□□□ 0.72
LINC00661-201ENST00000546512 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
LINC00661-201ENST00000546512 SPHKAPQ2M3C7 1700 aa19.52■□□□□ 0.72
LINC00661-201ENST00000546512 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
LINC00661-201ENST00000546512 ZFYVE9O95405 1425 aa19.5■□□□□ 0.71
LINC00661-201ENST00000546512 RIMS2Q9UQ26 1411 aa19.5■□□□□ 0.71
LINC00661-201ENST00000546512 HDGFP51858 240 aaKnown RBP19.48■□□□□ 0.71
LINC00661-201ENST00000546512 SLC4A1APQ9BWU0 796 aaKnown RBP19.48■□□□□ 0.71
LINC00661-201ENST00000546512 PPP1R15AO75807 674 aaPredicted RBP19.47■□□□□ 0.71
LINC00661-201ENST00000546512 BCANQ96GW7 911 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms