RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 ANKLE2Q86XL3 938 aa29.3■■■□□ 2.28
C12orf43-209ENST00000546272 TNRQ92752 1358 aa29.28■■■□□ 2.28
C12orf43-209ENST00000546272 SENP3Q9H4L4 574 aaPredicted RBP29.23■■■□□ 2.27
C12orf43-209ENST00000546272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.23■■■□□ 2.27
C12orf43-209ENST00000546272 MED14O60244 1454 aa29.23■■■□□ 2.27
C12orf43-209ENST00000546272 THEMISQ8N1K5 641 aaPredicted RBP29.22■■■□□ 2.27
C12orf43-209ENST00000546272 CFDP1Q9UEE9 299 aaPredicted RBP29.22■■■□□ 2.27
C12orf43-209ENST00000546272 RGS17Q9UGC6 210 aaPredicted RBP29.22■■■□□ 2.27
C12orf43-209ENST00000546272 DEPDC5O75140 1603 aa29.22■■■□□ 2.27
C12orf43-209ENST00000546272 FBXO31Q5XUX0 539 aaPredicted RBP29.21■■■□□ 2.27
C12orf43-209ENST00000546272 NPHP4O75161 1426 aaPredicted RBP29.21■■■□□ 2.27
C12orf43-209ENST00000546272 RNF17Q9BXT8 1623 aaKnown RBP29.19■■■□□ 2.26
C12orf43-209ENST00000546272 PZPP20742 1482 aa29.19■■■□□ 2.26
C12orf43-209ENST00000546272 LRRC7Q96NW7 1537 aa29.16■■■□□ 2.26
C12orf43-209ENST00000546272 IQGAP1P46940 1657 aa29.16■■■□□ 2.26
C12orf43-209ENST00000546272 UGGT1Q9NYU2 1555 aa29.16■■■□□ 2.26
C12orf43-209ENST00000546272 STRCP1A6NGW2 1772 aa29.15■■■□□ 2.26
C12orf43-209ENST00000546272 FYCO1Q9BQS8 1478 aa29.15■■■□□ 2.26
C12orf43-209ENST00000546272 NLRP1Q9C000 1473 aa29.15■■■□□ 2.26
C12orf43-209ENST00000546272 SYNMO15061 1565 aa29.14■■■□□ 2.26
C12orf43-209ENST00000546272 FAM135AQ9P2D6 1515 aa29.14■■■□□ 2.26
C12orf43-209ENST00000546272 DHX29Q7Z478 1369 aaKnown RBP29.13■■■□□ 2.25
C12orf43-209ENST00000546272 CCNB3Q8WWL7 1395 aa29.13■■■□□ 2.25
C12orf43-209ENST00000546272 KDM5DQ9BY66 1539 aa29.13■■■□□ 2.25
C12orf43-209ENST00000546272 MIA2Q96PC5 1412 aa29.12■■■□□ 2.25
C12orf43-209ENST00000546272 RTEL1-TNFRSF6BF6WH68 1400 aa29.1■■■□□ 2.25
C12orf43-209ENST00000546272 KIF3BO15066 747 aa29.08■■■□□ 2.25
C12orf43-209ENST00000546272 WASHC2CQ9Y4E1 1318 aa29.07■■■□□ 2.24
C12orf43-209ENST00000546272 MBD5Q9P267 1494 aa29.04■■■□□ 2.24
C12orf43-209ENST00000546272 ZNF644Q9H582 1327 aaPredicted RBP29.02■■■□□ 2.24
C12orf43-209ENST00000546272 POTEAQ6S8J7 498 aa29.01■■■□□ 2.23
C12orf43-209ENST00000546272 ZC3H13Q5T200 1668 aaKnown RBP28.96■■■□□ 2.23
C12orf43-209ENST00000546272 MTUS2Q5JR59 1369 aa28.95■■■□□ 2.22
C12orf43-209ENST00000546272 TIAM1Q13009 1591 aa28.93■■■□□ 2.22
C12orf43-209ENST00000546272 XIRP1Q702N8 1843 aaKnown RBP28.91■■■□□ 2.22
C12orf43-209ENST00000546272 FAM135BQ49AJ0 1406 aa28.91■■■□□ 2.22
C12orf43-209ENST00000546272 CCDC141Q6ZP82 1450 aa28.87■■■□□ 2.21
C12orf43-209ENST00000546272 SCAF11Q99590 1463 aaKnown RBP28.85■■■□□ 2.21
C12orf43-209ENST00000546272 SETD1AO15047 1707 aaKnown RBP28.85■■■□□ 2.21
C12orf43-209ENST00000546272 RSPH4AQ5TD94 716 aa28.83■■■□□ 2.21
C12orf43-209ENST00000546272 UBR1Q8IWV7 1749 aa28.83■■■□□ 2.21
C12orf43-209ENST00000546272 ERVK-7P63135 1459 aa28.81■■■□□ 2.2
C12orf43-209ENST00000546272 ABCC3O15438 1527 aa28.79■■■□□ 2.2
C12orf43-209ENST00000546272 EHBP1L1Q8N3D4 1523 aa28.79■■■□□ 2.2
C12orf43-209ENST00000546272 ROBO1Q9Y6N7 1651 aa28.76■■■□□ 2.2
C12orf43-209ENST00000546272 LTKP29376 864 aa28.76■■■□□ 2.19
C12orf43-209ENST00000546272 TXNDC2Q86VQ3 553 aa28.76■■■□□ 2.19
C12orf43-209ENST00000546272 CEP162Q5TB80 1403 aa28.76■■■□□ 2.19
C12orf43-209ENST00000546272 ARHGAP23Q9P227 1491 aa28.75■■■□□ 2.19
C12orf43-209ENST00000546272 SLIT1O75093 1534 aa28.75■■■□□ 2.19
C12orf43-209ENST00000546272 CAMSAP2Q08AD1 1489 aa28.75■■■□□ 2.19
C12orf43-209ENST00000546272 NCOA2Q15596 1464 aa28.75■■■□□ 2.19
C12orf43-209ENST00000546272 CFAP65Q6ZU64 1925 aaKnown RBP28.74■■■□□ 2.19
C12orf43-209ENST00000546272 TMEM94Q12767 1356 aa28.7■■■□□ 2.19
C12orf43-209ENST00000546272 TSPY4P0CV99 314 aa28.7■■■□□ 2.19
C12orf43-209ENST00000546272 TSPY10P0CW01 314 aa28.7■■■□□ 2.19
C12orf43-209ENST00000546272 EID1Q9Y6B2 187 aa28.7■■■□□ 2.19
C12orf43-209ENST00000546272 ARHGEF5Q12774 1597 aa28.68■■■□□ 2.18
C12orf43-209ENST00000546272 LRRC9Q6ZRR7 1453 aa28.67■■■□□ 2.18
C12orf43-209ENST00000546272 UPF1Q92900 1129 aaKnown RBP eCLIP28.67■■■□□ 2.18
C12orf43-209ENST00000546272 EIF2AK4Q9P2K8 1649 aaKnown RBP28.65■■■□□ 2.18
C12orf43-209ENST00000546272 CEP152O94986 1710 aa28.64■■■□□ 2.18
C12orf43-209ENST00000546272 MAP3K1Q13233 1512 aa28.63■■■□□ 2.17
C12orf43-209ENST00000546272 JCADQ9P266 1359 aa28.62■■■□□ 2.17
C12orf43-209ENST00000546272 MROH1Q8NDA8 1641 aa28.62■■■□□ 2.17
C12orf43-209ENST00000546272 KCNA6P17658 529 aa28.62■■■□□ 2.17
C12orf43-209ENST00000546272 PHLPP1O60346 1717 aa28.61■■■□□ 2.17
C12orf43-209ENST00000546272 PROSER2Q86WR7 435 aaPredicted RBP28.61■■■□□ 2.17
C12orf43-209ENST00000546272 TMEM2Q9UHN6 1383 aa28.58■■■□□ 2.17
C12orf43-209ENST00000546272 MAST1Q9Y2H9 1570 aa28.57■■■□□ 2.16
C12orf43-209ENST00000546272 PRDM15P57071 1507 aaPredicted RBP28.55■■■□□ 2.16
C12orf43-209ENST00000546272 PIK3C2BO00750 1634 aa28.55■■■□□ 2.16
C12orf43-209ENST00000546272 ARHGAP31Q2M1Z3 1444 aa28.54■■■□□ 2.16
C12orf43-209ENST00000546272 RBM33Q96EV2 1170 aaKnown RBP28.54■■■□□ 2.16
C12orf43-209ENST00000546272 ZNF772Q68DY9 489 aaPredicted RBP28.53■■■□□ 2.16
C12orf43-209ENST00000546272 SLAIN2Q9P270 581 aa28.53■■■□□ 2.16
C12orf43-209ENST00000546272 MSH6P52701 1360 aa28.53■■■□□ 2.16
C12orf43-209ENST00000546272 NKTRP30414 1462 aaKnown RBP28.52■■■□□ 2.16
C12orf43-209ENST00000546272 TRIM52Q96A61 297 aa28.51■■■□□ 2.15
C12orf43-209ENST00000546272 STAG3Q9UJ98 1225 aa28.51■■■□□ 2.15
C12orf43-209ENST00000546272 TET3O43151 1660 aa28.5■■■□□ 2.15
C12orf43-209ENST00000546272 KDM5AP29375 1690 aaKnown RBP28.49■■■□□ 2.15
C12orf43-209ENST00000546272 SLC26A8Q96RN1 970 aa28.49■■■□□ 2.15
C12orf43-209ENST00000546272 SPATA31A6Q5VVP1 1343 aa28.48■■■□□ 2.15
C12orf43-209ENST00000546272 NWD1Q149M9 1564 aa28.48■■■□□ 2.15
C12orf43-209ENST00000546272 COL16A1Q07092 1604 aaPredicted RBP28.48■■■□□ 2.15
C12orf43-209ENST00000546272 MEX3CQ5U5Q3 659 aaKnown RBP28.47■■■□□ 2.15
C12orf43-209ENST00000546272 LRP6O75581 1613 aa28.46■■■□□ 2.15
C12orf43-209ENST00000546272 EFCAB6Q5THR3 1501 aa28.46■■■□□ 2.15
C12orf43-209ENST00000546272 FGD6Q6ZV73 1430 aa28.45■■■□□ 2.14
C12orf43-209ENST00000546272 DUOX2Q9NRD8 1548 aa28.44■■■□□ 2.14
C12orf43-209ENST00000546272 RXRBP28702 533 aa28.42■■■□□ 2.14
C12orf43-209ENST00000546272 CDK12Q9NYV4 1490 aaPredicted RBP28.39■■■□□ 2.14
C12orf43-209ENST00000546272 IDI1Q13907 227 aa28.38■■■□□ 2.13
C12orf43-209ENST00000546272 SHPRHQ149N8 1683 aa28.36■■■□□ 2.13
C12orf43-209ENST00000546272 SRCAPQ6ZRS2 3230 aa28.34■■■□□ 2.13
C12orf43-209ENST00000546272 BCANQ96GW7 911 aa28.33■■■□□ 2.13
C12orf43-209ENST00000546272 CHD2O14647 1828 aaKnown RBP28.32■■■□□ 2.12
C12orf43-209ENST00000546272 LOC105371045A0A1W2PR82 267 aa28.31■■■□□ 2.12
C12orf43-209ENST00000546272 ERBINQ96RT1 1412 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms