RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 NAIPQ13075 1403 aa31.37■■■□□ 2.61
SCARB1-211ENST00000546215 MROH1Q8NDA8 1641 aa31.36■■■□□ 2.61
SCARB1-211ENST00000546215 ESF1Q9H501 851 aaKnown RBP31.35■■■□□ 2.61
SCARB1-211ENST00000546215 PTPRMP28827 1452 aa31.35■■■□□ 2.61
SCARB1-211ENST00000546215 HFM1A2PYH4 1435 aa31.35■■■□□ 2.61
SCARB1-211ENST00000546215 CNTLNQ9NXG0 1405 aa31.33■■■□□ 2.61
SCARB1-211ENST00000546215 DEPDC5O75140 1603 aa31.33■■■□□ 2.61
SCARB1-211ENST00000546215 GCC2Q8IWJ2 1684 aa31.3■■■□□ 2.6
SCARB1-211ENST00000546215 PRDM15P57071 1507 aaPredicted RBP31.3■■■□□ 2.6
SCARB1-211ENST00000546215 WASHC2CQ9Y4E1 1318 aa31.29■■■□□ 2.6
SCARB1-211ENST00000546215 CLTCQ00610 1675 aaKnown RBP31.29■■■□□ 2.6
SCARB1-211ENST00000546215 FAM135AQ9P2D6 1515 aa31.29■■■□□ 2.6
SCARB1-211ENST00000546215 KDM5DQ9BY66 1539 aa31.28■■■□□ 2.6
SCARB1-211ENST00000546215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.28■■■□□ 2.6
SCARB1-211ENST00000546215 ZMYM3Q14202 1370 aa31.25■■■□□ 2.59
SCARB1-211ENST00000546215 MROH2AA6NES4 1674 aa31.25■■■□□ 2.59
SCARB1-211ENST00000546215 ABCC3O15438 1527 aa31.24■■■□□ 2.59
SCARB1-211ENST00000546215 CEBPAP49715 358 aaPredicted RBP31.24■■■□□ 2.59
SCARB1-211ENST00000546215 UNC13BO14795 1591 aa31.22■■■□□ 2.59
SCARB1-211ENST00000546215 VWDEQ8N2E2 1590 aa31.22■■■□□ 2.59
SCARB1-211ENST00000546215 KANK1Q14678 1352 aa31.22■■■□□ 2.59
SCARB1-211ENST00000546215 C3P01024 1663 aa31.21■■■□□ 2.59
SCARB1-211ENST00000546215 ZC3H13Q5T200 1668 aaKnown RBP31.21■■■□□ 2.59
SCARB1-211ENST00000546215 AEBP2Q6ZN18 517 aaPredicted RBP31.21■■■□□ 2.59
SCARB1-211ENST00000546215 PLPPR3Q6T4P5 718 aa31.2■■■□□ 2.58
SCARB1-211ENST00000546215 CEP152O94986 1710 aa31.19■■■□□ 2.58
SCARB1-211ENST00000546215 LMTK2Q8IWU2 1503 aa31.15■■■□□ 2.58
SCARB1-211ENST00000546215 SETD5Q9C0A6 1442 aa31.15■■■□□ 2.58
SCARB1-211ENST00000546215 TRIM26Q12899 539 aaPredicted RBP31.14■■■□□ 2.58
SCARB1-211ENST00000546215 NUP155O75694 1391 aa31.14■■■□□ 2.58
SCARB1-211ENST00000546215 CAMSAP1Q5T5Y3 1602 aa31.12■■■□□ 2.57
SCARB1-211ENST00000546215 PZPP20742 1482 aa31.11■■■□□ 2.57
SCARB1-211ENST00000546215 IQGAP3Q86VI3 1631 aa31.1■■■□□ 2.57
SCARB1-211ENST00000546215 ARHGAP31Q2M1Z3 1444 aa31.09■■■□□ 2.57
SCARB1-211ENST00000546215 FBXO31Q5XUX0 539 aaPredicted RBP31.07■■■□□ 2.56
SCARB1-211ENST00000546215 NPATQ14207 1427 aa31.07■■■□□ 2.56
SCARB1-211ENST00000546215 SETD1BQ9UPS6 1966 aaKnown RBP31.06■■■□□ 2.56
SCARB1-211ENST00000546215 RAB3GAP2Q9H2M9 1393 aa31.05■■■□□ 2.56
SCARB1-211ENST00000546215 EFCAB6Q5THR3 1501 aa31.05■■■□□ 2.56
SCARB1-211ENST00000546215 TET3O43151 1660 aa31.04■■■□□ 2.56
SCARB1-211ENST00000546215 TRIM52Q96A61 297 aa31.04■■■□□ 2.56
SCARB1-211ENST00000546215 CFAP65Q6ZU64 1925 aaKnown RBP31.01■■■□□ 2.55
SCARB1-211ENST00000546215 ACIN1Q9UKV3 1341 aaKnown RBP30.98■■■□□ 2.55
SCARB1-211ENST00000546215 ERVK-7P63135 1459 aa30.98■■■□□ 2.55
SCARB1-211ENST00000546215 HRCP23327 699 aa30.97■■■□□ 2.55
SCARB1-211ENST00000546215 SPATA31D1Q6ZQQ2 1576 aa30.97■■■□□ 2.55
SCARB1-211ENST00000546215 RPRD2Q5VT52 1461 aaKnown RBP30.96■■■□□ 2.55
SCARB1-211ENST00000546215 PREX1Q8TCU6 1659 aa30.95■■■□□ 2.55
SCARB1-211ENST00000546215 TNRQ92752 1358 aa30.95■■■□□ 2.55
SCARB1-211ENST00000546215 E9PCH4 1651 aa30.94■■■□□ 2.54
SCARB1-211ENST00000546215 SLC4A1APQ9BWU0 796 aaKnown RBP30.92■■■□□ 2.54
SCARB1-211ENST00000546215 UHRF1BP1Q6BDS2 1440 aa30.91■■■□□ 2.54
SCARB1-211ENST00000546215 LMTK3Q96Q04 1460 aa30.9■■■□□ 2.54
SCARB1-211ENST00000546215 NOS1P29475 1434 aa30.9■■■□□ 2.54
SCARB1-211ENST00000546215 MYO3AQ8NEV4 1616 aa30.88■■■□□ 2.53
SCARB1-211ENST00000546215 PKD2Q13563 968 aa30.87■■■□□ 2.53
SCARB1-211ENST00000546215 MPHOSPH9Q99550 1183 aa30.87■■■□□ 2.53
SCARB1-211ENST00000546215 SYNMO15061 1565 aa30.84■■■□□ 2.53
SCARB1-211ENST00000546215 NLRP1Q9C000 1473 aa30.83■■■□□ 2.53
SCARB1-211ENST00000546215 CEP170BQ9Y4F5 1589 aaPredicted RBP30.81■■■□□ 2.52
SCARB1-211ENST00000546215 A2ML1A8K2U0 1454 aa30.8■■■□□ 2.52
SCARB1-211ENST00000546215 ZNF142P52746 1687 aaPredicted RBP30.8■■■□□ 2.52
SCARB1-211ENST00000546215 PTPRTO14522 1441 aa30.79■■■□□ 2.52
SCARB1-211ENST00000546215 IDI1Q13907 227 aa30.78■■■□□ 2.52
SCARB1-211ENST00000546215 HSPA2P54652 639 aa30.77■■■□□ 2.52
SCARB1-211ENST00000546215 FOXD1Q16676 465 aa30.77■■■□□ 2.52
SCARB1-211ENST00000546215 SLC52A1Q9NWF4 448 aa30.77■■■□□ 2.52
SCARB1-211ENST00000546215 SPHKAPQ2M3C7 1700 aa30.75■■■□□ 2.51
SCARB1-211ENST00000546215 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
SCARB1-211ENST00000546215 PLA2R1Q13018 1463 aa30.73■■■□□ 2.51
SCARB1-211ENST00000546215 PIK3C2BO00750 1634 aa30.72■■■□□ 2.51
SCARB1-211ENST00000546215 UGGT1Q9NYU2 1555 aa30.72■■■□□ 2.51
SCARB1-211ENST00000546215 TRPM2O94759 1503 aa30.69■■■□□ 2.5
SCARB1-211ENST00000546215 THEMISQ8N1K5 641 aaPredicted RBP30.67■■■□□ 2.5
SCARB1-211ENST00000546215 UBR1Q8IWV7 1749 aa30.67■■■□□ 2.5
SCARB1-211ENST00000546215 KDM5AP29375 1690 aaKnown RBP30.64■■■□□ 2.5
SCARB1-211ENST00000546215 STAG3Q9UJ98 1225 aa30.62■■■□□ 2.49
SCARB1-211ENST00000546215 CLTCL1P53675 1640 aa30.61■■■□□ 2.49
SCARB1-211ENST00000546215 ADGRB3O60242 1522 aa30.61■■■□□ 2.49
SCARB1-211ENST00000546215 TMEM131LA2VDJ0 1609 aa30.6■■■□□ 2.49
SCARB1-211ENST00000546215 ANKRD30BQ9BXX2 1392 aa30.57■■■□□ 2.48
SCARB1-211ENST00000546215 STRCQ7RTU9 1775 aa30.56■■■□□ 2.48
SCARB1-211ENST00000546215 CHGAP10645 457 aaKnown RBP30.56■■■□□ 2.48
SCARB1-211ENST00000546215 MYO5BQ9ULV0 1848 aa30.56■■■□□ 2.48
SCARB1-211ENST00000546215 CCDC144AA2RUR9 1427 aa30.54■■■□□ 2.48
SCARB1-211ENST00000546215 SLIT1O75093 1534 aa30.54■■■□□ 2.48
SCARB1-211ENST00000546215 ARHGAP23Q9P227 1491 aa30.54■■■□□ 2.48
SCARB1-211ENST00000546215 TMEM2Q9UHN6 1383 aa30.54■■■□□ 2.48
SCARB1-211ENST00000546215 NCKAP5LQ9HCH0 1330 aa30.52■■■□□ 2.48
SCARB1-211ENST00000546215 ANKLE2Q86XL3 938 aa30.51■■■□□ 2.47
SCARB1-211ENST00000546215 DHX57Q6P158 1386 aaKnown RBP30.51■■■□□ 2.47
SCARB1-211ENST00000546215 KIF1BO60333 1816 aa30.5■■■□□ 2.47
SCARB1-211ENST00000546215 LTKP29376 864 aa30.48■■■□□ 2.47
SCARB1-211ENST00000546215 TXNDC2Q86VQ3 553 aa30.45■■■□□ 2.47
SCARB1-211ENST00000546215 ZFYVE9O95405 1425 aa30.45■■■□□ 2.47
SCARB1-211ENST00000546215 POLR1AO95602 1720 aaPredicted RBP30.45■■■□□ 2.47
SCARB1-211ENST00000546215 EID1Q9Y6B2 187 aa30.44■■■□□ 2.46
SCARB1-211ENST00000546215 RIMS2Q9UQ26 1411 aa30.44■■■□□ 2.46
SCARB1-211ENST00000546215 NEURL4Q96JN8 1562 aa30.43■■■□□ 2.46
SCARB1-211ENST00000546215 SCAF11Q99590 1463 aaKnown RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms