RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 CEP170BQ9Y4F5 1589 aaPredicted RBP18.42■□□□□ 0.54
NECAP1-209ENST00000546181 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
NECAP1-209ENST00000546181 DHX29Q7Z478 1369 aaKnown RBP18.41■□□□□ 0.54
NECAP1-209ENST00000546181 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
NECAP1-209ENST00000546181 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.53
NECAP1-209ENST00000546181 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
NECAP1-209ENST00000546181 KIF3BO15066 747 aa18.38■□□□□ 0.53
NECAP1-209ENST00000546181 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
NECAP1-209ENST00000546181 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
NECAP1-209ENST00000546181 ARHGEF5Q12774 1597 aa18.36■□□□□ 0.53
NECAP1-209ENST00000546181 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
NECAP1-209ENST00000546181 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
NECAP1-209ENST00000546181 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
NECAP1-209ENST00000546181 KDM5DQ9BY66 1539 aa18.33■□□□□ 0.53
NECAP1-209ENST00000546181 TCOF1Q13428 1488 aaKnown RBP18.33■□□□□ 0.53
NECAP1-209ENST00000546181 PLA2R1Q13018 1463 aa18.33■□□□□ 0.52
NECAP1-209ENST00000546181 A2ML1A8K2U0 1454 aa18.32■□□□□ 0.52
NECAP1-209ENST00000546181 TNRQ92752 1358 aa18.3■□□□□ 0.52
NECAP1-209ENST00000546181 PZPP20742 1482 aa18.29■□□□□ 0.52
NECAP1-209ENST00000546181 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
NECAP1-209ENST00000546181 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
NECAP1-209ENST00000546181 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
NECAP1-209ENST00000546181 RSPH4AQ5TD94 716 aa18.28■□□□□ 0.52
NECAP1-209ENST00000546181 MAST1Q9Y2H9 1570 aa18.28■□□□□ 0.52
NECAP1-209ENST00000546181 POLR1AO95602 1720 aaPredicted RBP18.27■□□□□ 0.52
NECAP1-209ENST00000546181 NEURL4Q96JN8 1562 aa18.27■□□□□ 0.52
NECAP1-209ENST00000546181 PKD2Q13563 968 aa18.27■□□□□ 0.52
NECAP1-209ENST00000546181 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
NECAP1-209ENST00000546181 RNF17Q9BXT8 1623 aaKnown RBP18.26■□□□□ 0.51
NECAP1-209ENST00000546181 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
NECAP1-209ENST00000546181 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
NECAP1-209ENST00000546181 FAM135AQ9P2D6 1515 aa18.24■□□□□ 0.51
NECAP1-209ENST00000546181 MROH1Q8NDA8 1641 aa18.24■□□□□ 0.51
NECAP1-209ENST00000546181 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
NECAP1-209ENST00000546181 ABCC3O15438 1527 aa18.23■□□□□ 0.51
NECAP1-209ENST00000546181 CEP152O94986 1710 aa18.23■□□□□ 0.51
NECAP1-209ENST00000546181 DISP3Q9P2K9 1392 aa18.23■□□□□ 0.51
NECAP1-209ENST00000546181 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
NECAP1-209ENST00000546181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.22■□□□□ 0.51
NECAP1-209ENST00000546181 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
NECAP1-209ENST00000546181 EIF2AK4Q9P2K8 1649 aaKnown RBP18.21■□□□□ 0.51
NECAP1-209ENST00000546181 CROCC2H7BZ55 1655 aa18.19■□□□□ 0.5
NECAP1-209ENST00000546181 ZC3H13Q5T200 1668 aaKnown RBP18.19■□□□□ 0.5
NECAP1-209ENST00000546181 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
NECAP1-209ENST00000546181 ILDR2Q71H61 639 aa18.19■□□□□ 0.5
NECAP1-209ENST00000546181 UGGT1Q9NYU2 1555 aa18.19■□□□□ 0.5
NECAP1-209ENST00000546181 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
NECAP1-209ENST00000546181 SPATA31D1Q6ZQQ2 1576 aa18.17■□□□□ 0.5
NECAP1-209ENST00000546181 NLRP1Q9C000 1473 aa18.17■□□□□ 0.5
NECAP1-209ENST00000546181 ABCC5O15440 1437 aa18.16■□□□□ 0.5
NECAP1-209ENST00000546181 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
NECAP1-209ENST00000546181 DUOX2Q9NRD8 1548 aa18.16■□□□□ 0.5
NECAP1-209ENST00000546181 VWDEQ8N2E2 1590 aa18.14■□□□□ 0.49
NECAP1-209ENST00000546181 KIF15Q9NS87 1388 aa18.14■□□□□ 0.49
NECAP1-209ENST00000546181 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.49
NECAP1-209ENST00000546181 ANKLE2Q86XL3 938 aa18.13■□□□□ 0.49
NECAP1-209ENST00000546181 THEMISQ8N1K5 641 aaPredicted RBP18.13■□□□□ 0.49
NECAP1-209ENST00000546181 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
NECAP1-209ENST00000546181 NPHP4O75161 1426 aaPredicted RBP18.13■□□□□ 0.49
NECAP1-209ENST00000546181 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
NECAP1-209ENST00000546181 DEPDC5O75140 1603 aa18.12■□□□□ 0.49
NECAP1-209ENST00000546181 DAPK1P53355 1430 aa18.11■□□□□ 0.49
NECAP1-209ENST00000546181 PRDM15P57071 1507 aaPredicted RBP18.11■□□□□ 0.49
NECAP1-209ENST00000546181 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
NECAP1-209ENST00000546181 STRCP1A6NGW2 1772 aa18.11■□□□□ 0.49
NECAP1-209ENST00000546181 MED14O60244 1454 aa18.1■□□□□ 0.49
NECAP1-209ENST00000546181 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
NECAP1-209ENST00000546181 APLP2Q06481 763 aa18.1■□□□□ 0.49
NECAP1-209ENST00000546181 CPS1P31327 1500 aa18.09■□□□□ 0.49
NECAP1-209ENST00000546181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
NECAP1-209ENST00000546181 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
NECAP1-209ENST00000546181 PIP4K2BP78356 416 aa18.08■□□□□ 0.48
NECAP1-209ENST00000546181 ERBINQ96RT1 1412 aa18.07■□□□□ 0.48
NECAP1-209ENST00000546181 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
NECAP1-209ENST00000546181 ALKQ9UM73 1620 aa18.05■□□□□ 0.48
NECAP1-209ENST00000546181 HSPA1LP34931 641 aa18.04■□□□□ 0.48
NECAP1-209ENST00000546181 PIK3C2BO00750 1634 aa18.04■□□□□ 0.48
NECAP1-209ENST00000546181 LTKP29376 864 aa18.02■□□□□ 0.48
NECAP1-209ENST00000546181 ARHGAP31Q2M1Z3 1444 aa18.02■□□□□ 0.48
NECAP1-209ENST00000546181 SCAF11Q99590 1463 aaKnown RBP18.01■□□□□ 0.47
NECAP1-209ENST00000546181 LRRC7Q96NW7 1537 aa18■□□□□ 0.47
NECAP1-209ENST00000546181 ARHGAP23Q9P227 1491 aa18■□□□□ 0.47
NECAP1-209ENST00000546181 TOM1O60784 492 aa17.99■□□□□ 0.47
NECAP1-209ENST00000546181 ANKRD30AQ9BXX3 1397 aa17.99■□□□□ 0.47
NECAP1-209ENST00000546181 SYNMO15061 1565 aa17.99■□□□□ 0.47
NECAP1-209ENST00000546181 SLIT1O75093 1534 aa17.98■□□□□ 0.47
NECAP1-209ENST00000546181 FAM50AQ14320 339 aaKnown RBP17.98■□□□□ 0.47
NECAP1-209ENST00000546181 KANK1Q14678 1352 aa17.97■□□□□ 0.47
NECAP1-209ENST00000546181 SOCS7O14512 581 aa17.97■□□□□ 0.47
NECAP1-209ENST00000546181 TXNDC2Q86VQ3 553 aa17.97■□□□□ 0.47
NECAP1-209ENST00000546181 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
NECAP1-209ENST00000546181 XIRP1Q702N8 1843 aaKnown RBP17.95■□□□□ 0.46
NECAP1-209ENST00000546181 EFCAB6Q5THR3 1501 aa17.95■□□□□ 0.46
NECAP1-209ENST00000546181 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
NECAP1-209ENST00000546181 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
NECAP1-209ENST00000546181 IDI1Q13907 227 aa17.93■□□□□ 0.46
NECAP1-209ENST00000546181 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
NECAP1-209ENST00000546181 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
NECAP1-209ENST00000546181 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
NECAP1-209ENST00000546181 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms