RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MROH1Q8NDA8 1641 aa31■■■□□ 2.55
HMGA2-211ENST00000545998 PTPRMP28827 1452 aa30.99■■■□□ 2.55
HMGA2-211ENST00000545998 DEPDC5O75140 1603 aa30.98■■■□□ 2.55
HMGA2-211ENST00000545998 CNTLNQ9NXG0 1405 aa30.96■■■□□ 2.55
HMGA2-211ENST00000545998 CLTCQ00610 1675 aaKnown RBP30.96■■■□□ 2.55
HMGA2-211ENST00000545998 ESF1Q9H501 851 aaKnown RBP30.95■■■□□ 2.54
HMGA2-211ENST00000545998 GCC2Q8IWJ2 1684 aa30.95■■■□□ 2.54
HMGA2-211ENST00000545998 FAM135AQ9P2D6 1515 aa30.94■■■□□ 2.54
HMGA2-211ENST00000545998 MROH2AA6NES4 1674 aa30.94■■■□□ 2.54
HMGA2-211ENST00000545998 PRDM15P57071 1507 aaPredicted RBP30.94■■■□□ 2.54
HMGA2-211ENST00000545998 NAIPQ13075 1403 aa30.94■■■□□ 2.54
HMGA2-211ENST00000545998 KDM5DQ9BY66 1539 aa30.92■■■□□ 2.54
HMGA2-211ENST00000545998 HFM1A2PYH4 1435 aa30.92■■■□□ 2.54
HMGA2-211ENST00000545998 C3P01024 1663 aa30.88■■■□□ 2.53
HMGA2-211ENST00000545998 ZC3H13Q5T200 1668 aaKnown RBP30.88■■■□□ 2.53
HMGA2-211ENST00000545998 WASHC2CQ9Y4E1 1318 aa30.88■■■□□ 2.53
HMGA2-211ENST00000545998 AEBP2Q6ZN18 517 aaPredicted RBP30.88■■■□□ 2.53
HMGA2-211ENST00000545998 ABCC3O15438 1527 aa30.87■■■□□ 2.53
HMGA2-211ENST00000545998 CEP152O94986 1710 aa30.86■■■□□ 2.53
HMGA2-211ENST00000545998 UNC13BO14795 1591 aa30.85■■■□□ 2.53
HMGA2-211ENST00000545998 VWDEQ8N2E2 1590 aa30.85■■■□□ 2.53
HMGA2-211ENST00000545998 ZMYM3Q14202 1370 aa30.84■■■□□ 2.53
HMGA2-211ENST00000545998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.84■■■□□ 2.53
HMGA2-211ENST00000545998 CEBPAP49715 358 aaPredicted RBP30.83■■■□□ 2.53
HMGA2-211ENST00000545998 KANK1Q14678 1352 aa30.81■■■□□ 2.52
HMGA2-211ENST00000545998 PLPPR3Q6T4P5 718 aa30.8■■■□□ 2.52
HMGA2-211ENST00000545998 CAMSAP1Q5T5Y3 1602 aa30.78■■■□□ 2.52
HMGA2-211ENST00000545998 LMTK2Q8IWU2 1503 aa30.77■■■□□ 2.52
HMGA2-211ENST00000545998 PZPP20742 1482 aa30.73■■■□□ 2.51
HMGA2-211ENST00000545998 IQGAP3Q86VI3 1631 aa30.73■■■□□ 2.51
HMGA2-211ENST00000545998 SETD1BQ9UPS6 1966 aaKnown RBP30.73■■■□□ 2.51
HMGA2-211ENST00000545998 NPATQ14207 1427 aa30.7■■■□□ 2.51
HMGA2-211ENST00000545998 SETD5Q9C0A6 1442 aa30.7■■■□□ 2.51
HMGA2-211ENST00000545998 NUP155O75694 1391 aa30.7■■■□□ 2.51
HMGA2-211ENST00000545998 ARHGAP31Q2M1Z3 1444 aa30.7■■■□□ 2.5
HMGA2-211ENST00000545998 TET3O43151 1660 aa30.68■■■□□ 2.5
HMGA2-211ENST00000545998 EFCAB6Q5THR3 1501 aa30.68■■■□□ 2.5
HMGA2-211ENST00000545998 CFAP65Q6ZU64 1925 aaKnown RBP30.67■■■□□ 2.5
HMGA2-211ENST00000545998 FBXO31Q5XUX0 539 aaPredicted RBP30.65■■■□□ 2.5
HMGA2-211ENST00000545998 PREX1Q8TCU6 1659 aa30.64■■■□□ 2.5
HMGA2-211ENST00000545998 TRIM26Q12899 539 aaPredicted RBP30.63■■■□□ 2.49
HMGA2-211ENST00000545998 SPATA31D1Q6ZQQ2 1576 aa30.61■■■□□ 2.49
HMGA2-211ENST00000545998 ERVK-7P63135 1459 aa30.61■■■□□ 2.49
HMGA2-211ENST00000545998 RAB3GAP2Q9H2M9 1393 aa30.6■■■□□ 2.49
HMGA2-211ENST00000545998 TRIM52Q96A61 297 aa30.58■■■□□ 2.49
HMGA2-211ENST00000545998 E9PCH4 1651 aa30.58■■■□□ 2.49
HMGA2-211ENST00000545998 RPRD2Q5VT52 1461 aaKnown RBP30.58■■■□□ 2.49
HMGA2-211ENST00000545998 TNRQ92752 1358 aa30.57■■■□□ 2.48
HMGA2-211ENST00000545998 LMTK3Q96Q04 1460 aa30.56■■■□□ 2.48
HMGA2-211ENST00000545998 MYO3AQ8NEV4 1616 aa30.56■■■□□ 2.48
HMGA2-211ENST00000545998 UHRF1BP1Q6BDS2 1440 aa30.55■■■□□ 2.48
HMGA2-211ENST00000545998 ACIN1Q9UKV3 1341 aaKnown RBP30.54■■■□□ 2.48
HMGA2-211ENST00000545998 NOS1P29475 1434 aa30.51■■■□□ 2.47
HMGA2-211ENST00000545998 HRCP23327 699 aa30.5■■■□□ 2.47
HMGA2-211ENST00000545998 ZNF142P52746 1687 aaPredicted RBP30.5■■■□□ 2.47
HMGA2-211ENST00000545998 SYNMO15061 1565 aa30.48■■■□□ 2.47
HMGA2-211ENST00000545998 CEP170BQ9Y4F5 1589 aaPredicted RBP30.47■■■□□ 2.47
HMGA2-211ENST00000545998 NLRP1Q9C000 1473 aa30.47■■■□□ 2.47
HMGA2-211ENST00000545998 SLC4A1APQ9BWU0 796 aaKnown RBP30.46■■■□□ 2.47
HMGA2-211ENST00000545998 A2ML1A8K2U0 1454 aa30.45■■■□□ 2.46
HMGA2-211ENST00000545998 PKD2Q13563 968 aa30.42■■■□□ 2.46
HMGA2-211ENST00000545998 SPHKAPQ2M3C7 1700 aa30.41■■■□□ 2.46
HMGA2-211ENST00000545998 MPHOSPH9Q99550 1183 aa30.41■■■□□ 2.46
HMGA2-211ENST00000545998 PTPRTO14522 1441 aa30.39■■■□□ 2.46
HMGA2-211ENST00000545998 HSPA2P54652 639 aa30.38■■■□□ 2.45
HMGA2-211ENST00000545998 PIK3C2BO00750 1634 aa30.37■■■□□ 2.45
HMGA2-211ENST00000545998 SLC52A1Q9NWF4 448 aa30.36■■■□□ 2.45
HMGA2-211ENST00000545998 UGGT1Q9NYU2 1555 aa30.35■■■□□ 2.45
HMGA2-211ENST00000545998 IDI1Q13907 227 aa30.35■■■□□ 2.45
HMGA2-211ENST00000545998 UBR1Q8IWV7 1749 aa30.34■■■□□ 2.45
HMGA2-211ENST00000545998 TRPM2O94759 1503 aa30.32■■■□□ 2.44
HMGA2-211ENST00000545998 PLA2R1Q13018 1463 aa30.32■■■□□ 2.44
HMGA2-211ENST00000545998 FOXD1Q16676 465 aa30.32■■■□□ 2.44
HMGA2-211ENST00000545998 KDM5AP29375 1690 aaKnown RBP30.31■■■□□ 2.44
HMGA2-211ENST00000545998 THEMISQ8N1K5 641 aaPredicted RBP30.27■■■□□ 2.44
HMGA2-211ENST00000545998 ADGRB3O60242 1522 aa30.27■■■□□ 2.44
HMGA2-211ENST00000545998 STRCQ7RTU9 1775 aa30.25■■■□□ 2.43
HMGA2-211ENST00000545998 CLTCL1P53675 1640 aa30.25■■■□□ 2.43
HMGA2-211ENST00000545998 MYO5BQ9ULV0 1848 aa30.24■■■□□ 2.43
HMGA2-211ENST00000545998 TMEM131LA2VDJ0 1609 aa30.23■■■□□ 2.43
HMGA2-211ENST00000545998 PCGF6Q9BYE7 350 aa30.23■■■□□ 2.43
HMGA2-211ENST00000545998 STAG3Q9UJ98 1225 aa30.22■■■□□ 2.43
HMGA2-211ENST00000545998 SLIT1O75093 1534 aa30.18■■■□□ 2.42
HMGA2-211ENST00000545998 ARHGAP23Q9P227 1491 aa30.17■■■□□ 2.42
HMGA2-211ENST00000545998 KIF1BO60333 1816 aa30.17■■■□□ 2.42
HMGA2-211ENST00000545998 POLR1AO95602 1720 aaPredicted RBP30.16■■■□□ 2.42
HMGA2-211ENST00000545998 TMEM2Q9UHN6 1383 aa30.15■■■□□ 2.42
HMGA2-211ENST00000545998 CCDC144AA2RUR9 1427 aa30.14■■■□□ 2.42
HMGA2-211ENST00000545998 CHGAP10645 457 aaKnown RBP30.14■■■□□ 2.42
HMGA2-211ENST00000545998 ANKRD30BQ9BXX2 1392 aa30.14■■■□□ 2.42
HMGA2-211ENST00000545998 NCKAP5LQ9HCH0 1330 aa30.14■■■□□ 2.42
HMGA2-211ENST00000545998 ANKLE2Q86XL3 938 aa30.11■■■□□ 2.41
HMGA2-211ENST00000545998 NEURL4Q96JN8 1562 aa30.11■■■□□ 2.41
HMGA2-211ENST00000545998 ZFYVE9O95405 1425 aa30.07■■■□□ 2.4
HMGA2-211ENST00000545998 SCAF11Q99590 1463 aaKnown RBP30.07■■■□□ 2.4
HMGA2-211ENST00000545998 LTKP29376 864 aa30.07■■■□□ 2.4
HMGA2-211ENST00000545998 DHX57Q6P158 1386 aaKnown RBP30.06■■■□□ 2.4
HMGA2-211ENST00000545998 MED14O60244 1454 aa30.05■■■□□ 2.4
HMGA2-211ENST00000545998 TXNDC2Q86VQ3 553 aa30.05■■■□□ 2.4
HMGA2-211ENST00000545998 DMRT2Q9Y5R5 561 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms